RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 CEP350Q5VT06 3117 aa19.29■□□□□ 0.68
CXCL12-208ENST00000496375 GNAT3A8MTJ3 354 aa19.29■□□□□ 0.68
CXCL12-208ENST00000496375 TEFQ10587 303 aa19.29■□□□□ 0.68
CXCL12-208ENST00000496375 ARHGAP27Q6ZUM4 889 aa19.29■□□□□ 0.68
CXCL12-208ENST00000496375 TTC5Q8N0Z6 440 aa19.29■□□□□ 0.68
CXCL12-208ENST00000496375 IL17REQ8NFR9 667 aa19.29■□□□□ 0.68
CXCL12-208ENST00000496375 CFAP53Q96M91 514 aa19.28■□□□□ 0.68
CXCL12-208ENST00000496375 PIM2Q9P1W9 311 aa19.28■□□□□ 0.68
CXCL12-208ENST00000496375 NARFQ9UHQ1 456 aa19.28■□□□□ 0.68
CXCL12-208ENST00000496375 ARFGEF1Q9Y6D6 1849 aa19.28■□□□□ 0.68
CXCL12-208ENST00000496375 SIPA1L3O60292 1781 aaPredicted RBP19.27■□□□□ 0.68
CXCL12-208ENST00000496375 CANXP27824 592 aaKnown RBP19.27■□□□□ 0.68
CXCL12-208ENST00000496375 AFDNP55196 1824 aaKnown RBP19.25■□□□□ 0.67
CXCL12-208ENST00000496375 STARD3NLO95772 234 aa19.25■□□□□ 0.67
CXCL12-208ENST00000496375 CHRNA5P30532 468 aa19.25■□□□□ 0.67
CXCL12-208ENST00000496375 PRKAR2BP31323 418 aa19.25■□□□□ 0.67
CXCL12-208ENST00000496375 NFIXQ14938 502 aa19.25■□□□□ 0.67
CXCL12-208ENST00000496375 DALRD3Q5D0E6 543 aaKnown RBP19.25■□□□□ 0.67
CXCL12-208ENST00000496375 ZNF790Q6PG37 636 aa19.25■□□□□ 0.67
CXCL12-208ENST00000496375 ZNF496Q96IT1 587 aaPredicted RBP19.25■□□□□ 0.67
CXCL12-208ENST00000496375 PHACTR3Q96KR7 559 aa19.25■□□□□ 0.67
CXCL12-208ENST00000496375 RSPH6AQ9H0K4 717 aa19.25■□□□□ 0.67
CXCL12-208ENST00000496375 BCL2L12Q9HB09 334 aa19.25■□□□□ 0.67
CXCL12-208ENST00000496375 HEG1Q9ULI3 1381 aa19.24■□□□□ 0.67
CXCL12-208ENST00000496375 CEMIPQ8WUJ3 1361 aa19.23■□□□□ 0.67
CXCL12-208ENST00000496375 KIF3CO14782 793 aa19.23■□□□□ 0.67
CXCL12-208ENST00000496375 PPP2R1AP30153 589 aa19.23■□□□□ 0.67
CXCL12-208ENST00000496375 NUDCQ9Y266 331 aa19.23■□□□□ 0.67
CXCL12-208ENST00000496375 NRXN2Q9P2S2 1712 aa19.22■□□□□ 0.67
CXCL12-208ENST00000496375 EIF5P55010 431 aaKnown RBP19.22■□□□□ 0.67
CXCL12-208ENST00000496375 TEX13AQ9BXU3 409 aaPredicted RBP19.22■□□□□ 0.67
CXCL12-208ENST00000496375 A0A087WZG4 1122 aa19.21■□□□□ 0.67
CXCL12-208ENST00000496375 SERPINB2P05120 415 aa19.21■□□□□ 0.67
CXCL12-208ENST00000496375 U2AF1L5P0DN76 240 aaPredicted RBP19.21■□□□□ 0.67
CXCL12-208ENST00000496375 U2AF1Q01081 240 aaKnown RBP eCLIP19.21■□□□□ 0.67
CXCL12-208ENST00000496375 FMNL2Q96PY5 1086 aa19.21■□□□□ 0.67
CXCL12-208ENST00000496375 ZNF316A6NFI3 1004 aaPredicted RBP19.2■□□□□ 0.66
CXCL12-208ENST00000496375 BTBD11A6QL63 1104 aa19.2■□□□□ 0.66
CXCL12-208ENST00000496375 C9orf131Q5VYM1 1079 aa19.2■□□□□ 0.66
CXCL12-208ENST00000496375 ZNF330Q9Y3S2 320 aaPredicted RBP19.2■□□□□ 0.66
CXCL12-208ENST00000496375 KCNQ3O43525 872 aa19.19■□□□□ 0.66
CXCL12-208ENST00000496375 BICDL1Q6ZP65 573 aa19.19■□□□□ 0.66
CXCL12-208ENST00000496375 HSPA6P17066 643 aa19.18■□□□□ 0.66
CXCL12-208ENST00000496375 DDX10Q13206 875 aaKnown RBP19.18■□□□□ 0.66
CXCL12-208ENST00000496375 SCN7AQ01118 1682 aa19.17■□□□□ 0.66
CXCL12-208ENST00000496375 IL6STP40189 918 aaPredicted RBP19.17■□□□□ 0.66
CXCL12-208ENST00000496375 RTF1Q92541 710 aaKnown RBP19.17■□□□□ 0.66
CXCL12-208ENST00000496375 TBC1D2BQ9UPU7 963 aa19.17■□□□□ 0.66
CXCL12-208ENST00000496375 CARMIL3Q8ND23 1372 aa19.17■□□□□ 0.66
CXCL12-208ENST00000496375 DLEC1Q9Y238 1755 aa19.16■□□□□ 0.66
CXCL12-208ENST00000496375 A1BGP04217 495 aa19.16■□□□□ 0.66
CXCL12-208ENST00000496375 TBC1D9BQ66K14 1250 aa19.16■□□□□ 0.66
CXCL12-208ENST00000496375 MCM10Q7L590 875 aa19.16■□□□□ 0.66
CXCL12-208ENST00000496375 NMRK2Q9NPI5 230 aa19.16■□□□□ 0.66
CXCL12-208ENST00000496375 RNF181Q9P0P0 153 aa19.16■□□□□ 0.66
CXCL12-208ENST00000496375 SBF1O95248 1867 aa19.16■□□□□ 0.66
CXCL12-208ENST00000496375 C2CD5Q86YS7 1000 aa19.15■□□□□ 0.66
CXCL12-208ENST00000496375 NPM2Q86SE8 214 aaKnown RBP19.14■□□□□ 0.65
CXCL12-208ENST00000496375 H0YIN7 160 aa19.13■□□□□ 0.65
CXCL12-208ENST00000496375 RASSF7Q02833 373 aa19.13■□□□□ 0.65
CXCL12-208ENST00000496375 DCTN1Q14203 1278 aa19.13■□□□□ 0.65
CXCL12-208ENST00000496375 TTLL6Q8N841 843 aa19.13■□□□□ 0.65
CXCL12-208ENST00000496375 USP16Q9Y5T5 823 aa19.13■□□□□ 0.65
CXCL12-208ENST00000496375 ANKRD31Q8N7Z5 1873 aa19.12■□□□□ 0.65
CXCL12-208ENST00000496375 PRAMEF22A3QJZ6 481 aa19.12■□□□□ 0.65
CXCL12-208ENST00000496375 TOMM70O94826 608 aa19.12■□□□□ 0.65
CXCL12-208ENST00000496375 CAMTA2O94983 1202 aa19.12■□□□□ 0.65
CXCL12-208ENST00000496375 PIP4K2AP48426 406 aaPredicted RBP19.11■□□□□ 0.65
CXCL12-208ENST00000496375 PRR5LQ6MZQ0 368 aa19.11■□□□□ 0.65
CXCL12-208ENST00000496375 BCORQ6W2J9 1755 aa19.11■□□□□ 0.65
CXCL12-208ENST00000496375 HTATSF1O43719 755 aaKnown RBP19.1■□□□□ 0.65
CXCL12-208ENST00000496375 SNRPA1P09661 255 aaKnown RBP19.1■□□□□ 0.65
CXCL12-208ENST00000496375 DZIP3Q86Y13 1208 aaKnown RBP19.1■□□□□ 0.65
CXCL12-208ENST00000496375 CCDC24Q8N4L8 307 aa19.1■□□□□ 0.65
CXCL12-208ENST00000496375 BRIP1Q9BX63 1249 aa19.1■□□□□ 0.65
CXCL12-208ENST00000496375 KDM2BQ8NHM5 1336 aa19.09■□□□□ 0.65
CXCL12-208ENST00000496375 RALBP1Q15311 655 aa19.09■□□□□ 0.65
CXCL12-208ENST00000496375 ZNF622Q969S3 477 aaKnown RBP eCLIP19.09■□□□□ 0.65
CXCL12-208ENST00000496375 SETDB2Q96T68 719 aa19.09■□□□□ 0.65
CXCL12-208ENST00000496375 COL11A2P13942 1736 aaPredicted RBP19.08■□□□□ 0.65
CXCL12-208ENST00000496375 PDE6BP35913 854 aa19.08■□□□□ 0.64
CXCL12-208ENST00000496375 C16orf71Q8IYS4 520 aaPredicted RBP19.08■□□□□ 0.64
CXCL12-208ENST00000496375 PDZRN3Q9UPQ7 1066 aa19.08■□□□□ 0.64
CXCL12-208ENST00000496375 NPHP1O15259 732 aa19.07■□□□□ 0.64
CXCL12-208ENST00000496375 NEFMP07197 916 aa19.07■□□□□ 0.64
CXCL12-208ENST00000496375 LMNB1P20700 586 aa19.07■□□□□ 0.64
CXCL12-208ENST00000496375 TAF7Q15545 349 aaPredicted RBP19.07■□□□□ 0.64
CXCL12-208ENST00000496375 CNBD1Q8NA66 436 aa19.07■□□□□ 0.64
CXCL12-208ENST00000496375 DLG5Q8TDM6 1919 aa19.07■□□□□ 0.64
CXCL12-208ENST00000496375 CCDC88AQ3V6T2 1871 aa19.06■□□□□ 0.64
CXCL12-208ENST00000496375 TNRC6CQ9HCJ0 1690 aaKnown RBP19.06■□□□□ 0.64
CXCL12-208ENST00000496375 PRELPP51888 382 aa19.06■□□□□ 0.64
CXCL12-208ENST00000496375 RBM46Q8TBY0 533 aaKnown RBP19.06■□□□□ 0.64
CXCL12-208ENST00000496375 RRAGCQ9HB90 399 aa19.06■□□□□ 0.64
CXCL12-208ENST00000496375 ZC3H4Q9UPT8 1303 aaKnown RBP19.05■□□□□ 0.64
CXCL12-208ENST00000496375 NFKBIEO00221 500 aa19.05■□□□□ 0.64
CXCL12-208ENST00000496375 APLP1P51693 650 aa19.05■□□□□ 0.64
CXCL12-208ENST00000496375 ST5P78524 1137 aa19.05■□□□□ 0.64
CXCL12-208ENST00000496375 MIS18AQ9NYP9 233 aa19.05■□□□□ 0.64
CXCL12-208ENST00000496375 ZNF219Q9P2Y4 722 aaPredicted RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms