RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 NUCB1Q02818 461 aa26.49■■□□□ 1.83
FGFR1-223ENST00000496296 ZNF772Q68DY9 489 aaPredicted RBP26.49■■□□□ 1.83
FGFR1-223ENST00000496296 SLC4A10Q6U841 1118 aa26.49■■□□□ 1.83
FGFR1-223ENST00000496296 SNRPA1P09661 255 aaKnown RBP26.47■■□□□ 1.83
FGFR1-223ENST00000496296 ZNF496Q96IT1 587 aaPredicted RBP26.47■■□□□ 1.83
FGFR1-223ENST00000496296 CCDC9Q9Y3X0 531 aaKnown RBP26.47■■□□□ 1.83
FGFR1-223ENST00000496296 SPATA31A5Q5VU36 1347 aa26.47■■□□□ 1.83
FGFR1-223ENST00000496296 SPATA31A7Q8IWB4 1347 aa26.47■■□□□ 1.83
FGFR1-223ENST00000496296 WNK3Q9BYP7 1800 aa26.46■■□□□ 1.83
FGFR1-223ENST00000496296 F6X3S4 739 aa26.46■■□□□ 1.83
FGFR1-223ENST00000496296 UNC5CLQ8IV45 518 aa26.46■■□□□ 1.83
FGFR1-223ENST00000496296 GCC1Q96CN9 775 aa26.46■■□□□ 1.83
FGFR1-223ENST00000496296 PHAXQ9H814 394 aaKnown RBP26.46■■□□□ 1.83
FGFR1-223ENST00000496296 SEC24BO95487 1268 aa26.45■■□□□ 1.83
FGFR1-223ENST00000496296 FNBP4Q8N3X1 1017 aaPredicted RBP26.45■■□□□ 1.82
FGFR1-223ENST00000496296 HYPKQ9NX55 129 aa26.45■■□□□ 1.82
FGFR1-223ENST00000496296 TMOD3Q9NYL9 352 aa26.45■■□□□ 1.82
FGFR1-223ENST00000496296 PRAMEF22A3QJZ6 481 aa26.44■■□□□ 1.82
FGFR1-223ENST00000496296 TNS2Q63HR2 1409 aa26.44■■□□□ 1.82
FGFR1-223ENST00000496296 PXDNLA1KZ92 1463 aa26.43■■□□□ 1.82
FGFR1-223ENST00000496296 BARGINQ6ZT62 677 aa26.42■■□□□ 1.82
FGFR1-223ENST00000496296 DDB1Q16531 1140 aa26.42■■□□□ 1.82
FGFR1-223ENST00000496296 DDX21Q9NR30 783 aaKnown RBP eCLIP26.42■■□□□ 1.82
FGFR1-223ENST00000496296 USP21Q9UK80 565 aa26.41■■□□□ 1.82
FGFR1-223ENST00000496296 CHD1LQ86WJ1 897 aa26.4■■□□□ 1.82
FGFR1-223ENST00000496296 TBC1D32Q96NH3 1257 aa26.4■■□□□ 1.82
FGFR1-223ENST00000496296 QTRT2Q9H974 415 aaKnown RBP26.4■■□□□ 1.82
FGFR1-223ENST00000496296 C1orf115Q9H7X2 142 aa26.39■■□□□ 1.82
FGFR1-223ENST00000496296 UPF2Q9HAU5 1272 aaKnown RBP26.39■■□□□ 1.82
FGFR1-223ENST00000496296 N4BP2Q86UW6 1770 aaPredicted RBP26.39■■□□□ 1.81
FGFR1-223ENST00000496296 ANXA1P04083 346 aa26.38■■□□□ 1.81
FGFR1-223ENST00000496296 VPS72Q15906 364 aa26.38■■□□□ 1.81
FGFR1-223ENST00000496296 C5P01031 1676 aa26.38■■□□□ 1.81
FGFR1-223ENST00000496296 DDX58O95786 925 aaKnown RBP26.38■■□□□ 1.81
FGFR1-223ENST00000496296 SIRT2Q8IXJ6 389 aa26.38■■□□□ 1.81
FGFR1-223ENST00000496296 DAXXQ9UER7 740 aaPredicted RBP26.38■■□□□ 1.81
FGFR1-223ENST00000496296 TOGARAM1Q9Y4F4 1720 aa26.38■■□□□ 1.81
FGFR1-223ENST00000496296 PAPPAQ13219 1627 aa26.37■■□□□ 1.81
FGFR1-223ENST00000496296 DNAAF4Q8WXU2 420 aa26.36■■□□□ 1.81
FGFR1-223ENST00000496296 USP16Q9Y5T5 823 aa26.36■■□□□ 1.81
FGFR1-223ENST00000496296 BCL9LQ86UU0 1499 aa26.36■■□□□ 1.81
FGFR1-223ENST00000496296 PI4KAP2A4QPH2 592 aa26.36■■□□□ 1.81
FGFR1-223ENST00000496296 PROSER3Q2NL68 480 aa26.36■■□□□ 1.81
FGFR1-223ENST00000496296 PI4KAP1Q8N8J0 262 aa26.36■■□□□ 1.81
FGFR1-223ENST00000496296 MEIS3Q99687 375 aa26.36■■□□□ 1.81
FGFR1-223ENST00000496296 GNAI3P08754 354 aa26.35■■□□□ 1.81
FGFR1-223ENST00000496296 NBR1Q14596 966 aa26.35■■□□□ 1.81
FGFR1-223ENST00000496296 PDIA6Q15084 440 aa26.35■■□□□ 1.81
FGFR1-223ENST00000496296 UBR2Q8IWV8 1755 aa26.35■■□□□ 1.81
FGFR1-223ENST00000496296 RXRBP28702 533 aa26.34■■□□□ 1.81
FGFR1-223ENST00000496296 RPAP2Q8IXW5 612 aaPredicted RBP26.34■■□□□ 1.81
FGFR1-223ENST00000496296 SRCIN1Q9C0H9 1055 aa26.34■■□□□ 1.81
FGFR1-223ENST00000496296 ATP10DQ9P241 1426 aa26.34■■□□□ 1.81
FGFR1-223ENST00000496296 KSR2Q6VAB6 950 aa26.34■■□□□ 1.81
FGFR1-223ENST00000496296 PIGBQ92521 554 aa26.34■■□□□ 1.81
FGFR1-223ENST00000496296 KCPQ6ZWJ8 1503 aa26.33■■□□□ 1.81
FGFR1-223ENST00000496296 ERBB4Q15303 1308 aa26.33■■□□□ 1.81
FGFR1-223ENST00000496296 PTCD1O75127 700 aaKnown RBP26.32■■□□□ 1.8
FGFR1-223ENST00000496296 LAMB4A4D0S4 1761 aa26.32■■□□□ 1.8
FGFR1-223ENST00000496296 MYL6BP14649 208 aa26.32■■□□□ 1.8
FGFR1-223ENST00000496296 TRPC5Q9UL62 973 aaPredicted RBP26.32■■□□□ 1.8
FGFR1-223ENST00000496296 ADCY9O60503 1353 aa26.31■■□□□ 1.8
FGFR1-223ENST00000496296 BMP2KLQ5H9B9 411 aa26.31■■□□□ 1.8
FGFR1-223ENST00000496296 GNAI2P04899 355 aa26.3■■□□□ 1.8
FGFR1-223ENST00000496296 AIMP1Q12904 312 aaKnown RBP26.3■■□□□ 1.8
FGFR1-223ENST00000496296 RTL5Q5HYW3 569 aaPredicted RBP26.3■■□□□ 1.8
FGFR1-223ENST00000496296 ANKRD44Q8N8A2 993 aa26.3■■□□□ 1.8
FGFR1-223ENST00000496296 MAP3K2Q9Y2U5 619 aa26.3■■□□□ 1.8
FGFR1-223ENST00000496296 BCL9O00512 1426 aa26.3■■□□□ 1.8
FGFR1-223ENST00000496296 GLI3P10071 1580 aa26.3■■□□□ 1.8
FGFR1-223ENST00000496296 BECN1Q14457 450 aa26.3■■□□□ 1.8
FGFR1-223ENST00000496296 SYTL4Q96C24 671 aaPredicted RBP26.3■■□□□ 1.8
FGFR1-223ENST00000496296 LNPKQ9C0E8 428 aa26.3■■□□□ 1.8
FGFR1-223ENST00000496296 ITGB4P16144 1822 aa26.29■■□□□ 1.8
FGFR1-223ENST00000496296 BEND3Q5T5X7 828 aa26.29■■□□□ 1.8
FGFR1-223ENST00000496296 VSIG10Q8N0Z9 540 aa26.29■■□□□ 1.8
FGFR1-223ENST00000496296 TEX13AQ9BXU3 409 aaPredicted RBP26.29■■□□□ 1.8
FGFR1-223ENST00000496296 DCTPP1Q9H773 170 aa26.29■■□□□ 1.8
FGFR1-223ENST00000496296 SOCS7O14512 581 aa26.28■■□□□ 1.8
FGFR1-223ENST00000496296 RBM6P78332 1123 aaKnown RBP26.28■■□□□ 1.8
FGFR1-223ENST00000496296 FAM98CQ17RN3 349 aaKnown RBP26.28■■□□□ 1.8
FGFR1-223ENST00000496296 ATG3Q9NT62 314 aa26.28■■□□□ 1.8
FGFR1-223ENST00000496296 ASAP1Q9ULH1 1129 aa26.28■■□□□ 1.8
FGFR1-223ENST00000496296 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.28■■□□□ 1.8
FGFR1-223ENST00000496296 SLC4A3P48751 1232 aa26.28■■□□□ 1.8
FGFR1-223ENST00000496296 CEP85Q6P2H3 762 aa26.28■■□□□ 1.8
FGFR1-223ENST00000496296 HMMRO75330 724 aa26.27■■□□□ 1.8
FGFR1-223ENST00000496296 ANKRD45Q5TZF3 282 aa26.27■■□□□ 1.8
FGFR1-223ENST00000496296 RIC3Q7Z5B4 369 aa26.27■■□□□ 1.8
FGFR1-223ENST00000496296 MARCH10Q8NA82 808 aaPredicted RBP26.27■■□□□ 1.8
FGFR1-223ENST00000496296 XAGE3Q8WTP9 111 aa26.27■■□□□ 1.8
FGFR1-223ENST00000496296 ATRNO75882 1429 aa26.27■■□□□ 1.8
FGFR1-223ENST00000496296 ALDH1L1O75891 902 aa26.26■■□□□ 1.79
FGFR1-223ENST00000496296 UBTFL1P0CB47 393 aaPredicted RBP26.26■■□□□ 1.79
FGFR1-223ENST00000496296 PRIM1P49642 420 aaKnown RBP26.26■■□□□ 1.79
FGFR1-223ENST00000496296 COPS6Q7L5N1 327 aa26.26■■□□□ 1.79
FGFR1-223ENST00000496296 USP44Q9H0E7 712 aa26.26■■□□□ 1.79
FGFR1-223ENST00000496296 DEKP35659 375 aaKnown RBP26.25■■□□□ 1.79
FGFR1-223ENST00000496296 RBM42Q9BTD8 480 aaKnown RBP26.24■■□□□ 1.79
FGFR1-223ENST00000496296 DOT1LQ8TEK3 1739 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms