RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 SNRPA1P09661 255 aaKnown RBP10.82□□□□□ -0.68
VPS13B-206ENST00000496144 PPP1R42Q7Z4L9 355 aa10.82□□□□□ -0.68
VPS13B-206ENST00000496144 FAM177BA6PVY3 158 aa10.82□□□□□ -0.68
VPS13B-206ENST00000496144 COL23A1Q86Y22 540 aaPredicted RBP10.82□□□□□ -0.68
VPS13B-206ENST00000496144 HTATSF1O43719 755 aaKnown RBP10.82□□□□□ -0.68
VPS13B-206ENST00000496144 EIF6P56537 245 aaKnown RBP10.82□□□□□ -0.68
VPS13B-206ENST00000496144 BCL9O00512 1426 aa10.82□□□□□ -0.68
VPS13B-206ENST00000496144 CRKLP46109 303 aaKnown RBP10.81□□□□□ -0.68
VPS13B-206ENST00000496144 SUPT20HQ8NEM7 779 aa10.81□□□□□ -0.68
VPS13B-206ENST00000496144 RRP7AQ9Y3A4 280 aaKnown RBP10.81□□□□□ -0.68
VPS13B-206ENST00000496144 ALDH1B1P30837 517 aa10.81□□□□□ -0.68
VPS13B-206ENST00000496144 RNF181Q9P0P0 153 aa10.81□□□□□ -0.68
VPS13B-206ENST00000496144 EIF2S2P20042 333 aaKnown RBP10.81□□□□□ -0.68
VPS13B-206ENST00000496144 KCNQ4P56696 695 aa10.81□□□□□ -0.68
VPS13B-206ENST00000496144 PLEKHG2Q9H7P9 1386 aa10.8□□□□□ -0.68
VPS13B-206ENST00000496144 DZIP3Q86Y13 1208 aaKnown RBP10.8□□□□□ -0.68
VPS13B-206ENST00000496144 ANO8Q9HCE9 1232 aaPredicted RBP10.8□□□□□ -0.68
VPS13B-206ENST00000496144 FAM208AQ9UK61 1670 aaKnown RBP10.8□□□□□ -0.68
VPS13B-206ENST00000496144 NEXNQ0ZGT2 675 aa10.8□□□□□ -0.68
VPS13B-206ENST00000496144 RBM17Q96I25 401 aaKnown RBP10.8□□□□□ -0.68
VPS13B-206ENST00000496144 USP54Q70EL1 1684 aa10.8□□□□□ -0.68
VPS13B-206ENST00000496144 ASAP1Q9ULH1 1129 aa10.8□□□□□ -0.68
VPS13B-206ENST00000496144 TCERG1O14776 1098 aaKnown RBP10.79□□□□□ -0.68
VPS13B-206ENST00000496144 TAF7Q15545 349 aaPredicted RBP10.79□□□□□ -0.68
VPS13B-206ENST00000496144 TTLL6Q8N841 843 aa10.79□□□□□ -0.68
VPS13B-206ENST00000496144 PNPLA7Q6ZV29 1317 aa10.79□□□□□ -0.68
VPS13B-206ENST00000496144 CNTNAP4Q9C0A0 1308 aa10.79□□□□□ -0.68
VPS13B-206ENST00000496144 ZNF827Q17R98 1081 aa10.79□□□□□ -0.68
VPS13B-206ENST00000496144 ANP32EQ9BTT0 268 aa10.79□□□□□ -0.68
VPS13B-206ENST00000496144 NRAPQ86VF7 1730 aa10.79□□□□□ -0.68
VPS13B-206ENST00000496144 ABCA3Q99758 1704 aa10.79□□□□□ -0.68
VPS13B-206ENST00000496144 PEAK1Q9H792 1746 aa10.78□□□□□ -0.68
VPS13B-206ENST00000496144 BCAR3O75815 825 aa10.78□□□□□ -0.68
VPS13B-206ENST00000496144 GRIPAP1Q4V328 841 aa10.78□□□□□ -0.68
VPS13B-206ENST00000496144 TAF7LQ5H9L4 462 aa10.78□□□□□ -0.68
VPS13B-206ENST00000496144 AKT1S1Q96B36 256 aa10.78□□□□□ -0.68
VPS13B-206ENST00000496144 THSD7AQ9UPZ6 1657 aa10.78□□□□□ -0.68
VPS13B-206ENST00000496144 CYP27B1O15528 508 aa10.77□□□□□ -0.68
VPS13B-206ENST00000496144 MS4A1P11836 297 aa10.77□□□□□ -0.68
VPS13B-206ENST00000496144 KCNJ4P48050 445 aa10.77□□□□□ -0.68
VPS13B-206ENST00000496144 BCL2L13Q9BXK5 485 aa10.77□□□□□ -0.68
VPS13B-206ENST00000496144 CENPQQ7L2Z9 268 aaPredicted RBP10.77□□□□□ -0.69
VPS13B-206ENST00000496144 PARP4Q9UKK3 1724 aaKnown RBP10.77□□□□□ -0.69
VPS13B-206ENST00000496144 DLG5Q8TDM6 1919 aa10.77□□□□□ -0.69
VPS13B-206ENST00000496144 SERPINB2P05120 415 aa10.77□□□□□ -0.69
VPS13B-206ENST00000496144 NKX1-1Q15270 411 aaPredicted RBP10.77□□□□□ -0.69
VPS13B-206ENST00000496144 VSIG10Q8N0Z9 540 aa10.77□□□□□ -0.69
VPS13B-206ENST00000496144 ATG3Q9NT62 314 aa10.77□□□□□ -0.69
VPS13B-206ENST00000496144 IQCA1LA6NCM1 817 aa10.76□□□□□ -0.69
VPS13B-206ENST00000496144 USPL1Q5W0Q7 1092 aa10.76□□□□□ -0.69
VPS13B-206ENST00000496144 NIP7Q9Y221 180 aaKnown RBP eCLIP10.76□□□□□ -0.69
VPS13B-206ENST00000496144 RIPK4P57078 832 aa10.76□□□□□ -0.69
VPS13B-206ENST00000496144 DNAJC10Q8IXB1 793 aa10.76□□□□□ -0.69
VPS13B-206ENST00000496144 PIK3C2AO00443 1686 aa10.76□□□□□ -0.69
VPS13B-206ENST00000496144 MYH16Q9H6N6 1097 aa10.76□□□□□ -0.69
VPS13B-206ENST00000496144 DDX46Q7L014 1031 aaKnown RBP10.75□□□□□ -0.69
VPS13B-206ENST00000496144 RIC3Q7Z5B4 369 aa10.75□□□□□ -0.69
VPS13B-206ENST00000496144 HDAC5Q9UQL6 1122 aa10.75□□□□□ -0.69
VPS13B-206ENST00000496144 PDE3AQ14432 1141 aa10.75□□□□□ -0.69
VPS13B-206ENST00000496144 ARHGEF1Q92888 912 aaKnown RBP10.75□□□□□ -0.69
VPS13B-206ENST00000496144 IL16Q14005 1332 aa10.75□□□□□ -0.69
VPS13B-206ENST00000496144 SLC39A6Q13433 755 aa10.75□□□□□ -0.69
VPS13B-206ENST00000496144 CC2D2BQ6DHV5 1058 aa10.75□□□□□ -0.69
VPS13B-206ENST00000496144 FBXW7Q969H0 707 aa10.75□□□□□ -0.69
VPS13B-206ENST00000496144 CCDC93Q567U6 631 aa10.75□□□□□ -0.69
VPS13B-206ENST00000496144 LINC00116Q8NCU8 138 aa10.75□□□□□ -0.69
VPS13B-206ENST00000496144 SMC1BQ8NDV3 1235 aa10.75□□□□□ -0.69
VPS13B-206ENST00000496144 NCAPD2Q15021 1401 aa10.74□□□□□ -0.69
VPS13B-206ENST00000496144 RARSP54136 660 aaKnown RBP10.74□□□□□ -0.69
VPS13B-206ENST00000496144 NFAT5O94916 1531 aa10.74□□□□□ -0.69
VPS13B-206ENST00000496144 APLP1P51693 650 aa10.74□□□□□ -0.69
VPS13B-206ENST00000496144 TRIM35Q9UPQ4 493 aa10.74□□□□□ -0.69
VPS13B-206ENST00000496144 RTKN2Q8IZC4 609 aa10.74□□□□□ -0.69
VPS13B-206ENST00000496144 NARFQ9UHQ1 456 aa10.74□□□□□ -0.69
VPS13B-206ENST00000496144 WDHD1O75717 1129 aaPredicted RBP10.74□□□□□ -0.69
VPS13B-206ENST00000496144 TMPOP42166 694 aaKnown RBP10.74□□□□□ -0.69
VPS13B-206ENST00000496144 EAPPQ56P03 285 aaPredicted RBP10.74□□□□□ -0.69
VPS13B-206ENST00000496144 MYL6BP14649 208 aa10.73□□□□□ -0.69
VPS13B-206ENST00000496144 IL13P35225 146 aa10.73□□□□□ -0.69
VPS13B-206ENST00000496144 AEBP1Q8IUX7 1158 aa10.73□□□□□ -0.69
VPS13B-206ENST00000496144 NLRP3Q96P20 1036 aa10.73□□□□□ -0.69
VPS13B-206ENST00000496144 CT47B1P0C2W7 299 aaPredicted RBP10.73□□□□□ -0.69
VPS13B-206ENST00000496144 MTHFSDQ2M296 383 aaKnown RBP10.73□□□□□ -0.69
VPS13B-206ENST00000496144 PARP10Q53GL7 1025 aa10.73□□□□□ -0.69
VPS13B-206ENST00000496144 NIM1KQ8IY84 436 aa10.73□□□□□ -0.69
VPS13B-206ENST00000496144 TAOK3Q9H2K8 898 aa10.73□□□□□ -0.69
VPS13B-206ENST00000496144 AIMP1Q12904 312 aaKnown RBP10.73□□□□□ -0.69
VPS13B-206ENST00000496144 RSPH6AQ9H0K4 717 aa10.73□□□□□ -0.69
VPS13B-206ENST00000496144 MEGF6O75095 1541 aa10.73□□□□□ -0.69
VPS13B-206ENST00000496144 DPEP1P16444 411 aa10.73□□□□□ -0.69
VPS13B-206ENST00000496144 NFE2L2Q16236 605 aa10.73□□□□□ -0.69
VPS13B-206ENST00000496144 ZNF790Q6PG37 636 aa10.73□□□□□ -0.69
VPS13B-206ENST00000496144 EYA3Q99504 573 aa10.73□□□□□ -0.69
VPS13B-206ENST00000496144 TBC1D2BQ9UPU7 963 aa10.73□□□□□ -0.69
VPS13B-206ENST00000496144 IL6STP40189 918 aaPredicted RBP10.72□□□□□ -0.69
VPS13B-206ENST00000496144 GNAI1P63096 354 aa10.72□□□□□ -0.69
VPS13B-206ENST00000496144 C9orf131Q5VYM1 1079 aa10.72□□□□□ -0.69
VPS13B-206ENST00000496144 BRWD3Q6RI45 1802 aa10.72□□□□□ -0.69
VPS13B-206ENST00000496144 A0A0G2JLW4 131 aa10.72□□□□□ -0.69
VPS13B-206ENST00000496144 LRRC37A3O60309 1634 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms