RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 DDX21Q9NR30 783 aaKnown RBP eCLIP20.6■□□□□ 0.89
HLA-A-208ENST00000496081 HYPKQ9NX55 129 aa20.6■□□□□ 0.89
HLA-A-208ENST00000496081 USP16Q9Y5T5 823 aa20.59■□□□□ 0.89
HLA-A-208ENST00000496081 SPATA31A5Q5VU36 1347 aa20.59■□□□□ 0.89
HLA-A-208ENST00000496081 SPATA31A7Q8IWB4 1347 aa20.59■□□□□ 0.89
HLA-A-208ENST00000496081 PI4KAP2A4QPH2 592 aa20.59■□□□□ 0.89
HLA-A-208ENST00000496081 PI4KAP1Q8N8J0 262 aa20.59■□□□□ 0.89
HLA-A-208ENST00000496081 NGLY1Q96IV0 654 aa20.59■□□□□ 0.89
HLA-A-208ENST00000496081 CDCA7Q9BWT1 371 aaPredicted RBP20.59■□□□□ 0.89
HLA-A-208ENST00000496081 ATP10DQ9P241 1426 aa20.59■□□□□ 0.89
HLA-A-208ENST00000496081 ADCY9O60503 1353 aa20.57■□□□□ 0.88
HLA-A-208ENST00000496081 TNS2Q63HR2 1409 aa20.57■□□□□ 0.88
HLA-A-208ENST00000496081 DNAAF4Q8WXU2 420 aa20.57■□□□□ 0.88
HLA-A-208ENST00000496081 TMOD3Q9NYL9 352 aa20.57■□□□□ 0.88
HLA-A-208ENST00000496081 KCPQ6ZWJ8 1503 aa20.57■□□□□ 0.88
HLA-A-208ENST00000496081 RPAP2Q8IXW5 612 aaPredicted RBP20.57■□□□□ 0.88
HLA-A-208ENST00000496081 ANKRD44Q8N8A2 993 aa20.57■□□□□ 0.88
HLA-A-208ENST00000496081 LAMB4A4D0S4 1761 aa20.56■□□□□ 0.88
HLA-A-208ENST00000496081 PDE4AP27815 886 aa20.56■□□□□ 0.88
HLA-A-208ENST00000496081 CEP85Q6P2H3 762 aa20.56■□□□□ 0.88
HLA-A-208ENST00000496081 ITGB4P16144 1822 aa20.56■□□□□ 0.88
HLA-A-208ENST00000496081 UNC5CLQ8IV45 518 aa20.55■□□□□ 0.88
HLA-A-208ENST00000496081 GCC1Q96CN9 775 aa20.55■□□□□ 0.88
HLA-A-208ENST00000496081 SRCIN1Q9C0H9 1055 aa20.55■□□□□ 0.88
HLA-A-208ENST00000496081 GNAI3P08754 354 aa20.54■□□□□ 0.88
HLA-A-208ENST00000496081 BEND3Q5T5X7 828 aa20.54■□□□□ 0.88
HLA-A-208ENST00000496081 KSR2Q6VAB6 950 aa20.54■□□□□ 0.88
HLA-A-208ENST00000496081 PIGBQ92521 554 aa20.54■□□□□ 0.88
HLA-A-208ENST00000496081 MYL6BP14649 208 aa20.54■□□□□ 0.88
HLA-A-208ENST00000496081 BARGINQ6ZT62 677 aa20.54■□□□□ 0.88
HLA-A-208ENST00000496081 BACH2Q9BYV9 841 aa20.54■□□□□ 0.88
HLA-A-208ENST00000496081 USP44Q9H0E7 712 aa20.54■□□□□ 0.88
HLA-A-208ENST00000496081 CCDC9Q9Y3X0 531 aaKnown RBP20.54■□□□□ 0.88
HLA-A-208ENST00000496081 BCL9LQ86UU0 1499 aa20.53■□□□□ 0.88
HLA-A-208ENST00000496081 GNAI2P04899 355 aa20.53■□□□□ 0.88
HLA-A-208ENST00000496081 NUCB1Q02818 461 aa20.53■□□□□ 0.88
HLA-A-208ENST00000496081 DDB1Q16531 1140 aa20.53■□□□□ 0.88
HLA-A-208ENST00000496081 LRP10Q7Z4F1 713 aa20.53■□□□□ 0.88
HLA-A-208ENST00000496081 MAP3K2Q9Y2U5 619 aa20.53■□□□□ 0.88
HLA-A-208ENST00000496081 PTCD1O75127 700 aaKnown RBP20.52■□□□□ 0.88
HLA-A-208ENST00000496081 AFF2P51816 1311 aa20.52■□□□□ 0.88
HLA-A-208ENST00000496081 AIMP1Q12904 312 aaKnown RBP20.51■□□□□ 0.87
HLA-A-208ENST00000496081 DDX58O95786 925 aaKnown RBP20.51■□□□□ 0.87
HLA-A-208ENST00000496081 FNBP4Q8N3X1 1017 aaPredicted RBP20.51■□□□□ 0.87
HLA-A-208ENST00000496081 DCTPP1Q9H773 170 aa20.51■□□□□ 0.87
HLA-A-208ENST00000496081 BCL9O00512 1426 aa20.5■□□□□ 0.87
HLA-A-208ENST00000496081 PIP4K2AP48426 406 aaPredicted RBP20.5■□□□□ 0.87
HLA-A-208ENST00000496081 XAGE3Q8WTP9 111 aa20.5■□□□□ 0.87
HLA-A-208ENST00000496081 ASAP1Q9ULH1 1129 aa20.5■□□□□ 0.87
HLA-A-208ENST00000496081 VPS72Q15906 364 aa20.49■□□□□ 0.87
HLA-A-208ENST00000496081 COPS6Q7L5N1 327 aa20.49■□□□□ 0.87
HLA-A-208ENST00000496081 CHD1LQ86WJ1 897 aa20.49■□□□□ 0.87
HLA-A-208ENST00000496081 ATG3Q9NT62 314 aa20.49■□□□□ 0.87
HLA-A-208ENST00000496081 USP21Q9UK80 565 aa20.49■□□□□ 0.87
HLA-A-208ENST00000496081 ERBB4Q15303 1308 aa20.49■□□□□ 0.87
HLA-A-208ENST00000496081 UBTFL1P0CB47 393 aaPredicted RBP20.49■□□□□ 0.87
HLA-A-208ENST00000496081 KAT6BQ8WYB5 2073 aa20.48■□□□□ 0.87
HLA-A-208ENST00000496081 FAM161AQ3B820 660 aa20.48■□□□□ 0.87
HLA-A-208ENST00000496081 ANKRD45Q5TZF3 282 aa20.48■□□□□ 0.87
HLA-A-208ENST00000496081 DOT1LQ8TEK3 1739 aa20.48■□□□□ 0.87
HLA-A-208ENST00000496081 NBPF26B4DH59 902 aa20.47■□□□□ 0.87
HLA-A-208ENST00000496081 ALDH1L1O75891 902 aa20.47■□□□□ 0.87
HLA-A-208ENST00000496081 NBPF14Q5TI25 921 aa20.47■□□□□ 0.87
HLA-A-208ENST00000496081 NBPF10Q6P3W6 841 aaKnown RBP20.47■□□□□ 0.87
HLA-A-208ENST00000496081 NBPF15Q8N660 670 aa20.47■□□□□ 0.87
HLA-A-208ENST00000496081 MARCH10Q8NA82 808 aaPredicted RBP20.47■□□□□ 0.87
HLA-A-208ENST00000496081 LNPKQ9C0E8 428 aa20.47■□□□□ 0.87
HLA-A-208ENST00000496081 LRRFIP2Q9Y608 721 aaKnown RBP20.47■□□□□ 0.87
HLA-A-208ENST00000496081 C8orf34Q49A92 452 aa20.46■□□□□ 0.87
HLA-A-208ENST00000496081 RIC3Q7Z5B4 369 aa20.46■□□□□ 0.87
HLA-A-208ENST00000496081 HMMRO75330 724 aa20.46■□□□□ 0.87
HLA-A-208ENST00000496081 NBPF7P0C2Y1 421 aaPredicted RBP20.46■□□□□ 0.87
HLA-A-208ENST00000496081 PRIM1P49642 420 aaKnown RBP20.46■□□□□ 0.87
HLA-A-208ENST00000496081 LINS1Q8NG48 757 aa20.46■□□□□ 0.87
HLA-A-208ENST00000496081 A1BGP04217 495 aa20.45■□□□□ 0.86
HLA-A-208ENST00000496081 ATP8B2P98198 1209 aa20.45■□□□□ 0.86
HLA-A-208ENST00000496081 FAM98CQ17RN3 349 aaKnown RBP20.45■□□□□ 0.86
HLA-A-208ENST00000496081 CWF19L2Q2TBE0 894 aaKnown RBP20.45■□□□□ 0.86
HLA-A-208ENST00000496081 ANKRD13DQ6ZTN6 518 aa20.45■□□□□ 0.86
HLA-A-208ENST00000496081 VSIG10Q8N0Z9 540 aa20.45■□□□□ 0.86
HLA-A-208ENST00000496081 SYTL4Q96C24 671 aaPredicted RBP20.45■□□□□ 0.86
HLA-A-208ENST00000496081 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.44■□□□□ 0.86
HLA-A-208ENST00000496081 PNMA6EA0A0J9YXQ4 647 aa20.43■□□□□ 0.86
HLA-A-208ENST00000496081 RBM42Q9BTD8 480 aaKnown RBP20.43■□□□□ 0.86
HLA-A-208ENST00000496081 METTL22Q9BUU2 404 aaPredicted RBP20.43■□□□□ 0.86
HLA-A-208ENST00000496081 IGKV5-2P06315 115 aa20.42■□□□□ 0.86
HLA-A-208ENST00000496081 TEX13AQ9BXU3 409 aaPredicted RBP20.42■□□□□ 0.86
HLA-A-208ENST00000496081 RGS17Q9UGC6 210 aaPredicted RBP20.42■□□□□ 0.86
HLA-A-208ENST00000496081 NEXNQ0ZGT2 675 aa20.41■□□□□ 0.86
HLA-A-208ENST00000496081 DNAJC10Q8IXB1 793 aa20.41■□□□□ 0.86
HLA-A-208ENST00000496081 QTRT2Q9H974 415 aaKnown RBP20.41■□□□□ 0.86
HLA-A-208ENST00000496081 ARFGEF2Q9Y6D5 1785 aa20.41■□□□□ 0.86
HLA-A-208ENST00000496081 PLBD2Q8NHP8 589 aa20.41■□□□□ 0.86
HLA-A-208ENST00000496081 C9orf78Q9NZ63 289 aaPredicted RBP20.41■□□□□ 0.86
HLA-A-208ENST00000496081 IBTKQ9P2D0 1353 aaPredicted RBP20.4■□□□□ 0.86
HLA-A-208ENST00000496081 SLC4A9Q96Q91 983 aa20.4■□□□□ 0.86
HLA-A-208ENST00000496081 MYD88Q99836 296 aa20.4■□□□□ 0.86
HLA-A-208ENST00000496081 UTYO14607 1347 aa20.4■□□□□ 0.86
HLA-A-208ENST00000496081 NEURL1BA8MQ27 555 aa20.39■□□□□ 0.86
HLA-A-208ENST00000496081 ZNF772Q68DY9 489 aaPredicted RBP20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms