RNA–Protein interactions for RNA: ENST00000495561.1

SRRM1-219, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-219ENST00000495561 MTFR1Q15390 333 aa9.91□□□□□ -0.82
SRRM1-219ENST00000495561 PCDHGA11Q9Y5H2 935 aa9.91□□□□□ -0.82
SRRM1-219ENST00000495561 USP3Q9Y6I4 520 aa9.91□□□□□ -0.82
SRRM1-219ENST00000495561 CDK2AP1O14519 115 aa9.9□□□□□ -0.82
SRRM1-219ENST00000495561 ATXN7O15265 892 aaPredicted RBP9.9□□□□□ -0.82
SRRM1-219ENST00000495561 PROCP04070 461 aa9.9□□□□□ -0.82
SRRM1-219ENST00000495561 HOXB4P17483 251 aaPredicted RBP9.9□□□□□ -0.82
SRRM1-219ENST00000495561 HCN2Q9UL51 889 aa9.9□□□□□ -0.82
SRRM1-219ENST00000495561 A0A1W2PNR3 127 aa9.89□□□□□ -0.83
SRRM1-219ENST00000495561 A6NJY4 79 aa9.89□□□□□ -0.83
SRRM1-219ENST00000495561 ARAFP10398 606 aa9.89□□□□□ -0.83
SRRM1-219ENST00000495561 COL8A1P27658 744 aa9.89□□□□□ -0.83
SRRM1-219ENST00000495561 NBPF1Q3BBV0 1214 aa9.89□□□□□ -0.83
SRRM1-219ENST00000495561 KRBA1A5PL33 1030 aa9.88□□□□□ -0.83
SRRM1-219ENST00000495561 EPXP11678 715 aa9.88□□□□□ -0.83
SRRM1-219ENST00000495561 AMPD1P23109 780 aa9.88□□□□□ -0.83
SRRM1-219ENST00000495561 ARSJQ5FYB0 599 aaPredicted RBP9.88□□□□□ -0.83
SRRM1-219ENST00000495561 DCDC2BA2VCK2 349 aa9.87□□□□□ -0.83
SRRM1-219ENST00000495561 MAPTP10636 758 aaKnown RBP9.87□□□□□ -0.83
SRRM1-219ENST00000495561 SKIP12755 728 aa9.87□□□□□ -0.83
SRRM1-219ENST00000495561 TNP2Q05952 138 aa9.87□□□□□ -0.83
SRRM1-219ENST00000495561 EML3Q32P44 896 aa9.87□□□□□ -0.83
SRRM1-219ENST00000495561 LINC00114Q6XXX2 140 aa9.87□□□□□ -0.83
SRRM1-219ENST00000495561 ALG2Q9H553 416 aa9.87□□□□□ -0.83
SRRM1-219ENST00000495561 ZDHHC3Q9NYG2 299 aa9.87□□□□□ -0.83
SRRM1-219ENST00000495561 NEURL1BA8MQ27 555 aa9.86□□□□□ -0.83
SRRM1-219ENST00000495561 TATP17735 454 aaPredicted RBP9.86□□□□□ -0.83
SRRM1-219ENST00000495561 BTBD6Q96KE9 485 aa9.86□□□□□ -0.83
SRRM1-219ENST00000495561 ZIC5Q96T25 663 aa9.86□□□□□ -0.83
SRRM1-219ENST00000495561 CABP1Q9NZU7 370 aa9.86□□□□□ -0.83
SRRM1-219ENST00000495561 NOD1Q9Y239 953 aa9.86□□□□□ -0.83
SRRM1-219ENST00000495561 CD33P20138 364 aa9.85□□□□□ -0.83
SRRM1-219ENST00000495561 GTF2IP78347 998 aa9.85□□□□□ -0.83
SRRM1-219ENST00000495561 ALYREFQ86V81 257 aaKnown RBP9.85□□□□□ -0.83
SRRM1-219ENST00000495561 SUV39H2Q9H5I1 410 aa9.85□□□□□ -0.83
SRRM1-219ENST00000495561 KHNYNO15037 678 aaKnown RBP9.84□□□□□ -0.83
SRRM1-219ENST00000495561 ADAM23O75077 832 aa9.84□□□□□ -0.83
SRRM1-219ENST00000495561 FAM182BQ5T319 152 aa9.84□□□□□ -0.83
SRRM1-219ENST00000495561 NFATC2IPQ8NCF5 419 aa9.84□□□□□ -0.83
SRRM1-219ENST00000495561 KLF15Q9UIH9 416 aa9.84□□□□□ -0.83
SRRM1-219ENST00000495561 PARP3Q9Y6F1 533 aa9.84□□□□□ -0.83
SRRM1-219ENST00000495561 BACH1O14867 736 aa9.83□□□□□ -0.84
SRRM1-219ENST00000495561 LZTS3O60299 673 aaPredicted RBP9.83□□□□□ -0.84
SRRM1-219ENST00000495561 FAM157BP0CG42 384 aa9.83□□□□□ -0.84
SRRM1-219ENST00000495561 DGKGP49619 791 aa9.83□□□□□ -0.84
SRRM1-219ENST00000495561 NCOA4Q13772 614 aa9.83□□□□□ -0.84
SRRM1-219ENST00000495561 GRIN2CQ14957 1233 aa9.83□□□□□ -0.84
SRRM1-219ENST00000495561 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.83□□□□□ -0.84
SRRM1-219ENST00000495561 POM121Q96HA1 1249 aa9.83□□□□□ -0.84
SRRM1-219ENST00000495561 ZNF358Q9NW07 568 aa9.83□□□□□ -0.84
SRRM1-219ENST00000495561 SCHIP1Q9P0W5 487 aaPredicted RBP9.83□□□□□ -0.84
SRRM1-219ENST00000495561 GNB5O14775 395 aa9.82□□□□□ -0.84
SRRM1-219ENST00000495561 ADH6P28332 368 aa9.82□□□□□ -0.84
SRRM1-219ENST00000495561 TXLNAP40222 546 aa9.82□□□□□ -0.84
SRRM1-219ENST00000495561 ZDHHC1Q8WTX9 485 aa9.82□□□□□ -0.84
SRRM1-219ENST00000495561 PSME1Q06323 249 aa9.81□□□□□ -0.84
SRRM1-219ENST00000495561 SAMD5Q5TGI4 173 aa9.81□□□□□ -0.84
SRRM1-219ENST00000495561 BICDL1Q6ZP65 573 aa9.81□□□□□ -0.84
SRRM1-219ENST00000495561 FCHSD1Q86WN1 690 aa9.81□□□□□ -0.84
SRRM1-219ENST00000495561 GJA3Q9Y6H8 435 aa9.81□□□□□ -0.84
SRRM1-219ENST00000495561 USP17L5A8MUK1 530 aa9.8□□□□□ -0.84
SRRM1-219ENST00000495561 PIK3R2O00459 728 aa9.8□□□□□ -0.84
SRRM1-219ENST00000495561 PRKCSHP14314 528 aaPredicted RBP9.8□□□□□ -0.84
SRRM1-219ENST00000495561 CHSY3Q70JA7 882 aa9.8□□□□□ -0.84
SRRM1-219ENST00000495561 WWC1Q8IX03 1113 aa9.8□□□□□ -0.84
SRRM1-219ENST00000495561 DEPDC4Q8N2C3 294 aa9.8□□□□□ -0.84
SRRM1-219ENST00000495561 AVENQ9NQS1 362 aaPredicted RBP9.8□□□□□ -0.84
SRRM1-219ENST00000495561 STRN4Q9NRL3 753 aa9.8□□□□□ -0.84
SRRM1-219ENST00000495561 BAG6P46379 1132 aa9.79□□□□□ -0.84
SRRM1-219ENST00000495561 EPHA4P54764 986 aa9.79□□□□□ -0.84
SRRM1-219ENST00000495561 ZNF468Q5VIY5 522 aaPredicted RBP9.79□□□□□ -0.84
SRRM1-219ENST00000495561 EFSO43281 561 aa9.78□□□□□ -0.84
SRRM1-219ENST00000495561 TEAD4Q15561 434 aa9.78□□□□□ -0.84
SRRM1-219ENST00000495561 L3MBTL2Q969R5 705 aa9.78□□□□□ -0.84
SRRM1-219ENST00000495561 PCBP4P57723 403 aaKnown RBP9.77□□□□□ -0.85
SRRM1-219ENST00000495561 TBCELQ5QJ74 424 aa9.77□□□□□ -0.85
SRRM1-219ENST00000495561 SLC9A9Q8IVB4 645 aa9.77□□□□□ -0.85
SRRM1-219ENST00000495561 TNS4Q8IZW8 715 aa9.77□□□□□ -0.85
SRRM1-219ENST00000495561 ADAMTS19Q8TE59 1207 aa9.77□□□□□ -0.85
SRRM1-219ENST00000495561 MARK1Q9P0L2 795 aa9.77□□□□□ -0.85
SRRM1-219ENST00000495561 PRR12Q9ULL5 1215 aa9.77□□□□□ -0.85
SRRM1-219ENST00000495561 POM121CA8CG34 1229 aa9.76□□□□□ -0.85
SRRM1-219ENST00000495561 EML1O00423 815 aa9.76□□□□□ -0.85
SRRM1-219ENST00000495561 NOS2P35228 1153 aa9.76□□□□□ -0.85
SRRM1-219ENST00000495561 LAMC2Q13753 1193 aa9.76□□□□□ -0.85
SRRM1-219ENST00000495561 K7ELQ4 463 aaPredicted RBP9.75□□□□□ -0.85
SRRM1-219ENST00000495561 RAD21O60216 631 aa9.75□□□□□ -0.85
SRRM1-219ENST00000495561 NOP53Q9NZM5 478 aaKnown RBP9.75□□□□□ -0.85
SRRM1-219ENST00000495561 ZNF232Q9UNY5 417 aa9.75□□□□□ -0.85
SRRM1-219ENST00000495561 C1QTNF9BB2RNN3 333 aa9.74□□□□□ -0.85
SRRM1-219ENST00000495561 SH3PXD2AQ5TCZ1 1133 aa9.74□□□□□ -0.85
SRRM1-219ENST00000495561 LRRC69Q6ZNQ3 347 aa9.74□□□□□ -0.85
SRRM1-219ENST00000495561 TRIM50Q86XT4 487 aa9.74□□□□□ -0.85
SRRM1-219ENST00000495561 C7orf43Q8WVR3 580 aa9.74□□□□□ -0.85
SRRM1-219ENST00000495561 KIAA1024Q9UPX6 916 aa9.74□□□□□ -0.85
SRRM1-219ENST00000495561 ZBTB7BO15156 539 aaPredicted RBP9.73□□□□□ -0.85
SRRM1-219ENST00000495561 CD163Q86VB7 1156 aa9.73□□□□□ -0.85
SRRM1-219ENST00000495561 PLEKHM2Q8IWE5 1019 aa9.73□□□□□ -0.85
SRRM1-219ENST00000495561 TPCN2Q8NHX9 752 aa9.73□□□□□ -0.85
SRRM1-219ENST00000495561 SERTM1A2A2V5 107 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms