RNA–Protein interactions for RNA: ENST00000495530.5

PTPRE-211, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-211ENST00000495530 SYTL4Q96C24 671 aaPredicted RBP18.9■□□□□ 0.62
PTPRE-211ENST00000495530 CHMP4AQ9BY43 222 aa18.9■□□□□ 0.62
PTPRE-211ENST00000495530 TUBGCP6Q96RT7 1819 aa18.89■□□□□ 0.61
PTPRE-211ENST00000495530 ZNF827Q17R98 1081 aa18.89■□□□□ 0.61
PTPRE-211ENST00000495530 ZNF790Q6PG37 636 aa18.89■□□□□ 0.61
PTPRE-211ENST00000495530 SLC34A2O95436 690 aa18.88■□□□□ 0.61
PTPRE-211ENST00000495530 EXOSC9Q06265 439 aaKnown RBP18.88■□□□□ 0.61
PTPRE-211ENST00000495530 TNS4Q8IZW8 715 aa18.88■□□□□ 0.61
PTPRE-211ENST00000495530 PIGBQ92521 554 aa18.88■□□□□ 0.61
PTPRE-211ENST00000495530 SOS1Q07889 1333 aaPredicted RBP18.88■□□□□ 0.61
PTPRE-211ENST00000495530 MRC1P22897 1456 aa18.88■□□□□ 0.61
PTPRE-211ENST00000495530 ZNF428Q96B54 188 aa18.87■□□□□ 0.61
PTPRE-211ENST00000495530 ACSBG1Q96GR2 724 aa18.87■□□□□ 0.61
PTPRE-211ENST00000495530 WDR90Q96KV7 1748 aa18.86■□□□□ 0.61
PTPRE-211ENST00000495530 EIF4A1P60842 406 aaKnown RBP18.86■□□□□ 0.61
PTPRE-211ENST00000495530 PCNTO95613 3336 aa18.86■□□□□ 0.61
PTPRE-211ENST00000495530 SMARCC1Q92922 1105 aaPredicted RBP18.85■□□□□ 0.61
PTPRE-211ENST00000495530 FMNL2Q96PY5 1086 aa18.85■□□□□ 0.61
PTPRE-211ENST00000495530 VIRMAQ69YN4 1812 aaKnown RBP18.85■□□□□ 0.61
PTPRE-211ENST00000495530 KIF3CO14782 793 aa18.84■□□□□ 0.61
PTPRE-211ENST00000495530 SLC39A6Q13433 755 aa18.84■□□□□ 0.61
PTPRE-211ENST00000495530 TWISTNBQ3B726 338 aaPredicted RBP18.84■□□□□ 0.61
PTPRE-211ENST00000495530 HOXB7P09629 217 aa18.83■□□□□ 0.6
PTPRE-211ENST00000495530 C8orf58Q8NAV2 365 aa18.83■□□□□ 0.6
PTPRE-211ENST00000495530 AKT1S1Q96B36 256 aa18.83■□□□□ 0.6
PTPRE-211ENST00000495530 PNPLA7Q6ZV29 1317 aa18.82■□□□□ 0.6
PTPRE-211ENST00000495530 KCNQ3O43525 872 aa18.82■□□□□ 0.6
PTPRE-211ENST00000495530 ATG3Q9NT62 314 aa18.82■□□□□ 0.6
PTPRE-211ENST00000495530 RCAN3Q9UKA8 241 aa18.82■□□□□ 0.6
PTPRE-211ENST00000495530 ASAP1Q9ULH1 1129 aa18.82■□□□□ 0.6
PTPRE-211ENST00000495530 SIPA1L3O60292 1781 aaPredicted RBP18.81■□□□□ 0.6
PTPRE-211ENST00000495530 ELL2O00472 640 aaPredicted RBP18.81■□□□□ 0.6
PTPRE-211ENST00000495530 VAMP4O75379 141 aa18.81■□□□□ 0.6
PTPRE-211ENST00000495530 SNRPA1P09661 255 aaKnown RBP18.81■□□□□ 0.6
PTPRE-211ENST00000495530 ZNF496Q96IT1 587 aaPredicted RBP18.81■□□□□ 0.6
PTPRE-211ENST00000495530 TEX13AQ9BXU3 409 aaPredicted RBP18.81■□□□□ 0.6
PTPRE-211ENST00000495530 LRRC4BQ9NT99 713 aa18.81■□□□□ 0.6
PTPRE-211ENST00000495530 VSIG10Q8N0Z9 540 aa18.8■□□□□ 0.6
PTPRE-211ENST00000495530 TSPYL6Q8N831 410 aa18.8■□□□□ 0.6
PTPRE-211ENST00000495530 ALDH1L2Q3SY69 923 aa18.79■□□□□ 0.6
PTPRE-211ENST00000495530 TOGARAM1Q9Y4F4 1720 aa18.79■□□□□ 0.6
PTPRE-211ENST00000495530 HEG1Q9ULI3 1381 aa18.79■□□□□ 0.6
PTPRE-211ENST00000495530 ITGB4P16144 1822 aa18.79■□□□□ 0.6
PTPRE-211ENST00000495530 PTCD1O75127 700 aaKnown RBP18.78■□□□□ 0.6
PTPRE-211ENST00000495530 TOMM70O94826 608 aa18.78■□□□□ 0.6
PTPRE-211ENST00000495530 HMGB2P26583 209 aaKnown RBP18.78■□□□□ 0.6
PTPRE-211ENST00000495530 SLC27A3Q5K4L6 730 aa18.78■□□□□ 0.6
PTPRE-211ENST00000495530 CCDC30Q5VVM6 783 aa18.78■□□□□ 0.6
PTPRE-211ENST00000495530 JMYQ8N9B5 988 aa18.78■□□□□ 0.6
PTPRE-211ENST00000495530 TFCP2L1Q9NZI6 479 aa18.78■□□□□ 0.6
PTPRE-211ENST00000495530 KDM3BQ7LBC6 1761 aa18.78■□□□□ 0.6
PTPRE-211ENST00000495530 DOT1LQ8TEK3 1739 aa18.77■□□□□ 0.6
PTPRE-211ENST00000495530 KRT24Q2M2I5 525 aa18.77■□□□□ 0.6
PTPRE-211ENST00000495530 RBM42Q9BTD8 480 aaKnown RBP18.77■□□□□ 0.6
PTPRE-211ENST00000495530 RARSP54136 660 aaKnown RBP18.76■□□□□ 0.59
PTPRE-211ENST00000495530 KLRG1Q96E93 195 aa18.76■□□□□ 0.59
PTPRE-211ENST00000495530 STK31Q9BXU1 1019 aa18.75■□□□□ 0.59
PTPRE-211ENST00000495530 CD2APQ9Y5K6 639 aa18.75■□□□□ 0.59
PTPRE-211ENST00000495530 PALLDQ8WX93 1383 aa18.74■□□□□ 0.59
PTPRE-211ENST00000495530 EIF2S2P20042 333 aaKnown RBP18.74■□□□□ 0.59
PTPRE-211ENST00000495530 HDGFL1Q5TGJ6 251 aa18.74■□□□□ 0.59
PTPRE-211ENST00000495530 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.74■□□□□ 0.59
PTPRE-211ENST00000495530 LOC102724428A0A0B4J2F2 783 aa18.73■□□□□ 0.59
PTPRE-211ENST00000495530 STARD3NLO95772 234 aa18.73■□□□□ 0.59
PTPRE-211ENST00000495530 SIK1P57059 783 aa18.73■□□□□ 0.59
PTPRE-211ENST00000495530 PCDH10Q9P2E7 1040 aa18.73■□□□□ 0.59
PTPRE-211ENST00000495530 ATP6V1AP38606 617 aa18.72■□□□□ 0.59
PTPRE-211ENST00000495530 BRPF1P55201 1214 aaPredicted RBP18.72■□□□□ 0.59
PTPRE-211ENST00000495530 SSH1Q8WYL5 1049 aa18.72■□□□□ 0.59
PTPRE-211ENST00000495530 SMC4Q9NTJ3 1288 aa18.72■□□□□ 0.59
PTPRE-211ENST00000495530 DBF4Q9UBU7 674 aaPredicted RBP18.72■□□□□ 0.59
PTPRE-211ENST00000495530 USP16Q9Y5T5 823 aa18.71■□□□□ 0.59
PTPRE-211ENST00000495530 LY75O60449 1722 aa18.71■□□□□ 0.59
PTPRE-211ENST00000495530 KCPQ6ZWJ8 1503 aa18.7■□□□□ 0.58
PTPRE-211ENST00000495530 IPO8O15397 1037 aaKnown RBP18.7■□□□□ 0.58
PTPRE-211ENST00000495530 SLC4A2P04920 1241 aa18.7■□□□□ 0.58
PTPRE-211ENST00000495530 SUPT16HQ9Y5B9 1047 aaKnown RBP18.7■□□□□ 0.58
PTPRE-211ENST00000495530 ERBB4Q15303 1308 aa18.7■□□□□ 0.58
PTPRE-211ENST00000495530 PRAMEF22A3QJZ6 481 aa18.69■□□□□ 0.58
PTPRE-211ENST00000495530 BCAR3O75815 825 aa18.69■□□□□ 0.58
PTPRE-211ENST00000495530 NECTIN2Q92692 538 aa18.69■□□□□ 0.58
PTPRE-211ENST00000495530 UBR2Q8IWV8 1755 aa18.68■□□□□ 0.58
PTPRE-211ENST00000495530 DNAJC10Q8IXB1 793 aa18.68■□□□□ 0.58
PTPRE-211ENST00000495530 MRPL50Q8N5N7 158 aaKnown RBP18.68■□□□□ 0.58
PTPRE-211ENST00000495530 DDX21Q9NR30 783 aaKnown RBP eCLIP18.68■□□□□ 0.58
PTPRE-211ENST00000495530 HYPKQ9NX55 129 aa18.68■□□□□ 0.58
PTPRE-211ENST00000495530 WWC3Q9ULE0 1092 aa18.68■□□□□ 0.58
PTPRE-211ENST00000495530 KIF16BQ96L93 1317 aa18.68■□□□□ 0.58
PTPRE-211ENST00000495530 CANXP27824 592 aaKnown RBP18.67■□□□□ 0.58
PTPRE-211ENST00000495530 SLC4A9Q96Q91 983 aa18.67■□□□□ 0.58
PTPRE-211ENST00000495530 BCL2L13Q9BXK5 485 aa18.67■□□□□ 0.58
PTPRE-211ENST00000495530 CCNL1Q9UK58 526 aaPredicted RBP18.67■□□□□ 0.58
PTPRE-211ENST00000495530 TCERG1O14776 1098 aaKnown RBP18.66■□□□□ 0.58
PTPRE-211ENST00000495530 MS4A1P11836 297 aa18.66■□□□□ 0.58
PTPRE-211ENST00000495530 ARHGAP45Q92619 1136 aa18.66■□□□□ 0.58
PTPRE-211ENST00000495530 CHPF2Q9P2E5 772 aa18.66■□□□□ 0.58
PTPRE-211ENST00000495530 CICQ96RK0 1608 aaPredicted RBP18.66■□□□□ 0.58
PTPRE-211ENST00000495530 CYP19A1P11511 503 aaPredicted RBP18.65■□□□□ 0.58
PTPRE-211ENST00000495530 NPM2Q86SE8 214 aaKnown RBP18.65■□□□□ 0.58
PTPRE-211ENST00000495530 FRAT1Q92837 279 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms