RNA–Protein interactions for RNA: ENST00000495484.5

PCDH15-223, Transcript of protocadherin related 15, human

TSL 5 BASIC

Gene PCDH15, Length 1,896 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-223	ENST00000495484	TOGARAM1	Q9Y4F4	1720 aa		11.73	□□□□□ -0.53
PCDH15-223	ENST00000495484	HMGB2	P26583	209 aa	Known RBP	11.72	□□□□□ -0.53
PCDH15-223	ENST00000495484	FKBP5	Q13451	457 aa	Predicted RBP	11.72	□□□□□ -0.53
PCDH15-223	ENST00000495484	POTEA	Q6S8J7	498 aa		11.72	□□□□□ -0.53
PCDH15-223	ENST00000495484	PANK1	Q8TE04	598 aa		11.72	□□□□□ -0.53
PCDH15-223	ENST00000495484	CLUAP1	Q96AJ1	413 aa		11.72	□□□□□ -0.53
PCDH15-223	ENST00000495484	KCP	Q6ZWJ8	1503 aa		11.72	□□□□□ -0.53
PCDH15-223	ENST00000495484	VIRMA	Q69YN4	1812 aa	Known RBP	11.72	□□□□□ -0.53
PCDH15-223	ENST00000495484	DDX58	O95786	925 aa	Known RBP	11.72	□□□□□ -0.53
PCDH15-223	ENST00000495484	FAM182B	Q5T319	152 aa		11.72	□□□□□ -0.53
PCDH15-223	ENST00000495484	CRBN	Q96SW2	442 aa		11.72	□□□□□ -0.53
PCDH15-223	ENST00000495484	DDX19B	Q9UMR2	479 aa		11.72	□□□□□ -0.53
PCDH15-223	ENST00000495484	PALLD	Q8WX93	1383 aa		11.72	□□□□□ -0.53
PCDH15-223	ENST00000495484	LOC102724428	A0A0B4J2F2	783 aa		11.71	□□□□□ -0.53
PCDH15-223	ENST00000495484	SIK1	P57059	783 aa		11.71	□□□□□ -0.53
PCDH15-223	ENST00000495484	MVP	Q14764	893 aa	Known RBP	11.71	□□□□□ -0.53
PCDH15-223	ENST00000495484	PDIA6	Q15084	440 aa		11.71	□□□□□ -0.53
PCDH15-223	ENST00000495484	G2E3	Q7L622	706 aa		11.71	□□□□□ -0.53
PCDH15-223	ENST00000495484	EXOC6	Q8TAG9	804 aa		11.71	□□□□□ -0.53
PCDH15-223	ENST00000495484	PPP4R2	Q9NY27	417 aa		11.71	□□□□□ -0.53
PCDH15-223	ENST00000495484	ABCC4	O15439	1325 aa		11.71	□□□□□ -0.54
PCDH15-223	ENST00000495484	PAPPA	Q13219	1627 aa		11.71	□□□□□ -0.54
PCDH15-223	ENST00000495484	RLBP1	P12271	317 aa		11.7	□□□□□ -0.54
PCDH15-223	ENST00000495484	ATP6V1A	P38606	617 aa		11.7	□□□□□ -0.54
PCDH15-223	ENST00000495484	ILDR1	Q86SU0	546 aa	Predicted RBP	11.7	□□□□□ -0.54
PCDH15-223	ENST00000495484	DNAJC10	Q8IXB1	793 aa		11.7	□□□□□ -0.54
PCDH15-223	ENST00000495484	PHAX	Q9H814	394 aa	Known RBP	11.7	□□□□□ -0.54
PCDH15-223	ENST00000495484	COG6	Q9Y2V7	657 aa		11.7	□□□□□ -0.54
PCDH15-223	ENST00000495484	CCT4	P50991	539 aa	Known RBP	11.7	□□□□□ -0.54
PCDH15-223	ENST00000495484	INTS3	Q68E01	1043 aa	Known RBP	11.7	□□□□□ -0.54
PCDH15-223	ENST00000495484	ITPRIP	Q8IWB1	547 aa		11.7	□□□□□ -0.54
PCDH15-223	ENST00000495484	TMEM57	Q8N5G2	664 aa		11.7	□□□□□ -0.54
PCDH15-223	ENST00000495484	DOT1L	Q8TEK3	1739 aa		11.7	□□□□□ -0.54
PCDH15-223	ENST00000495484	CYP19A1	P11511	503 aa	Predicted RBP	11.69	□□□□□ -0.54
PCDH15-223	ENST00000495484	MYL6B	P14649	208 aa		11.69	□□□□□ -0.54
PCDH15-223	ENST00000495484	SLC4A9	Q96Q91	983 aa		11.69	□□□□□ -0.54
PCDH15-223	ENST00000495484	UBR2	Q8IWV8	1755 aa		11.68	□□□□□ -0.54
PCDH15-223	ENST00000495484	A1BG	P04217	495 aa		11.68	□□□□□ -0.54
PCDH15-223	ENST00000495484	PROSER3	Q2NL68	480 aa		11.68	□□□□□ -0.54
PCDH15-223	ENST00000495484	KSR2	Q6VAB6	950 aa		11.68	□□□□□ -0.54
PCDH15-223	ENST00000495484	NPM2	Q86SE8	214 aa	Known RBP	11.68	□□□□□ -0.54
PCDH15-223	ENST00000495484	TNN	Q9UQP3	1299 aa		11.68	□□□□□ -0.54
PCDH15-223	ENST00000495484	ITGB4	P16144	1822 aa		11.68	□□□□□ -0.54
PCDH15-223	ENST00000495484	RGS12	O14924	1447 aa		11.68	□□□□□ -0.54
PCDH15-223	ENST00000495484	ANXA1	P04083	346 aa		11.68	□□□□□ -0.54
PCDH15-223	ENST00000495484	COPS6	Q7L5N1	327 aa		11.68	□□□□□ -0.54
PCDH15-223	ENST00000495484	DNAAF4	Q8WXU2	420 aa		11.68	□□□□□ -0.54
PCDH15-223	ENST00000495484	PI4KAP2	A4QPH2	592 aa		11.67	□□□□□ -0.54
PCDH15-223	ENST00000495484	NBPF26	B4DH59	902 aa		11.67	□□□□□ -0.54
PCDH15-223	ENST00000495484	AIMP1	Q12904	312 aa	Known RBP	11.67	□□□□□ -0.54
PCDH15-223	ENST00000495484	NBPF14	Q5TI25	921 aa		11.67	□□□□□ -0.54
PCDH15-223	ENST00000495484	NBPF10	Q6P3W6	841 aa	Known RBP	11.67	□□□□□ -0.54
PCDH15-223	ENST00000495484	SLC4A10	Q6U841	1118 aa		11.67	□□□□□ -0.54
PCDH15-223	ENST00000495484	ANKRD13D	Q6ZTN6	518 aa		11.67	□□□□□ -0.54
PCDH15-223	ENST00000495484	LRP10	Q7Z4F1	713 aa		11.67	□□□□□ -0.54
PCDH15-223	ENST00000495484	NBPF15	Q8N660	670 aa		11.67	□□□□□ -0.54
PCDH15-223	ENST00000495484	PI4KAP1	Q8N8J0	262 aa		11.67	□□□□□ -0.54
PCDH15-223	ENST00000495484	XAGE3	Q8WTP9	111 aa		11.67	□□□□□ -0.54
PCDH15-223	ENST00000495484	TRIM37	O94972	964 aa		11.66	□□□□□ -0.54
PCDH15-223	ENST00000495484	IL6ST	P40189	918 aa	Predicted RBP	11.66	□□□□□ -0.54
PCDH15-223	ENST00000495484	RIC3	Q7Z5B4	369 aa		11.66	□□□□□ -0.54
PCDH15-223	ENST00000495484	NHS	Q6T4R5	1651 aa		11.66	□□□□□ -0.54
PCDH15-223	ENST00000495484		F6X3S4	739 aa		11.66	□□□□□ -0.54
PCDH15-223	ENST00000495484	PTF1A	Q7RTS3	328 aa		11.66	□□□□□ -0.54
PCDH15-223	ENST00000495484	PLBD2	Q8NHP8	589 aa		11.66	□□□□□ -0.54
PCDH15-223	ENST00000495484	CCDC87	Q9NVE4	849 aa		11.66	□□□□□ -0.54
PCDH15-223	ENST00000495484	CCNL1	Q9UK58	526 aa	Predicted RBP	11.66	□□□□□ -0.54
PCDH15-223	ENST00000495484	KAT6B	Q8WYB5	2073 aa		11.65	□□□□□ -0.54
PCDH15-223	ENST00000495484	ZBTB7B	O15156	539 aa	Predicted RBP	11.65	□□□□□ -0.54
PCDH15-223	ENST00000495484	NEXN	Q0ZGT2	675 aa		11.65	□□□□□ -0.54
PCDH15-223	ENST00000495484	SLC27A3	Q5K4L6	730 aa		11.65	□□□□□ -0.54
PCDH15-223	ENST00000495484	RC3H1	Q5TC82	1133 aa	Known RBP	11.65	□□□□□ -0.54
PCDH15-223	ENST00000495484	CCDC136	Q96JN2	1154 aa		11.65	□□□□□ -0.54
PCDH15-223	ENST00000495484	SRCIN1	Q9C0H9	1055 aa		11.65	□□□□□ -0.54
PCDH15-223	ENST00000495484	MAP3K2	Q9Y2U5	619 aa		11.65	□□□□□ -0.54
PCDH15-223	ENST00000495484	PXDNL	A1KZ92	1463 aa		11.64	□□□□□ -0.55
PCDH15-223	ENST00000495484	CACNA1F	O60840	1977 aa		11.64	□□□□□ -0.55
PCDH15-223	ENST00000495484	CRKL	P46109	303 aa	Known RBP	11.64	□□□□□ -0.55
PCDH15-223	ENST00000495484	ITPK1	Q13572	414 aa		11.64	□□□□□ -0.55
PCDH15-223	ENST00000495484	ZBTB40	Q9NUA8	1239 aa		11.64	□□□□□ -0.55
PCDH15-223	ENST00000495484	PLSCR1	O15162	318 aa		11.63	□□□□□ -0.55
PCDH15-223	ENST00000495484	ALDH1L1	O75891	902 aa		11.63	□□□□□ -0.55
PCDH15-223	ENST00000495484	PIP4K2A	P48426	406 aa	Predicted RBP	11.63	□□□□□ -0.55
PCDH15-223	ENST00000495484	BEND3	Q5T5X7	828 aa		11.63	□□□□□ -0.55
PCDH15-223	ENST00000495484	INTS5	Q6P9B9	1019 aa	Known RBP	11.63	□□□□□ -0.55
PCDH15-223	ENST00000495484	KIF6	Q6ZMV9	814 aa		11.63	□□□□□ -0.55
PCDH15-223	ENST00000495484	LINS1	Q8NG48	757 aa		11.63	□□□□□ -0.55
PCDH15-223	ENST00000495484	HDAC5	Q9UQL6	1122 aa		11.63	□□□□□ -0.55
PCDH15-223	ENST00000495484	ATP10D	Q9P241	1426 aa		11.63	□□□□□ -0.55
PCDH15-223	ENST00000495484	C5	P01031	1676 aa		11.63	□□□□□ -0.55
PCDH15-223	ENST00000495484	GNAI3	P08754	354 aa		11.63	□□□□□ -0.55
PCDH15-223	ENST00000495484	METTL22	Q9BUU2	404 aa	Predicted RBP	11.63	□□□□□ -0.55
PCDH15-223	ENST00000495484	ZBTB1	Q9Y2K1	713 aa		11.63	□□□□□ -0.55
PCDH15-223	ENST00000495484	CNTNAP4	Q9C0A0	1308 aa		11.63	□□□□□ -0.55
PCDH15-223	ENST00000495484	ADCY9	O60503	1353 aa		11.63	□□□□□ -0.55
PCDH15-223	ENST00000495484	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.63	□□□□□ -0.55
PCDH15-223	ENST00000495484	LAMB4	A4D0S4	1761 aa		11.63	□□□□□ -0.55
PCDH15-223	ENST00000495484		A0A087WZG4	1122 aa		11.62	□□□□□ -0.55
PCDH15-223	ENST00000495484	EIF5	P55010	431 aa	Known RBP	11.62	□□□□□ -0.55
PCDH15-223	ENST00000495484	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.62	□□□□□ -0.55

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