RNA–Protein interactions for RNA: ENST00000494852.1

COL4A2-209, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-209ENST00000494852 SLC52A2Q9HAB3 445 aa21.67■■□□□ 1.06
COL4A2-209ENST00000494852 EIF4G2P78344 907 aaKnown RBP eCLIP21.66■■□□□ 1.06
COL4A2-209ENST00000494852 SMC1BQ8NDV3 1235 aa21.66■■□□□ 1.06
COL4A2-209ENST00000494852 CYP19A1P11511 503 aaPredicted RBP21.65■■□□□ 1.06
COL4A2-209ENST00000494852 NARFQ9UHQ1 456 aa21.65■■□□□ 1.06
COL4A2-209ENST00000494852 PCNTO95613 3336 aa21.65■■□□□ 1.06
COL4A2-209ENST00000494852 NFIXQ14938 502 aa21.63■■□□□ 1.05
COL4A2-209ENST00000494852 LGR6Q9HBX8 967 aa21.63■■□□□ 1.05
COL4A2-209ENST00000494852 HSPA5P11021 654 aaKnown RBP21.62■■□□□ 1.05
COL4A2-209ENST00000494852 LMNB1P20700 586 aa21.62■■□□□ 1.05
COL4A2-209ENST00000494852 NRXN2Q9P2S2 1712 aa21.62■■□□□ 1.05
COL4A2-209ENST00000494852 MRC1P22897 1456 aa21.62■■□□□ 1.05
COL4A2-209ENST00000494852 COL15A1P39059 1388 aa21.61■■□□□ 1.05
COL4A2-209ENST00000494852 RNMTO43148 476 aaKnown RBP21.61■■□□□ 1.05
COL4A2-209ENST00000494852 RASSF7Q02833 373 aa21.61■■□□□ 1.05
COL4A2-209ENST00000494852 COL13A1Q5TAT6 717 aaPredicted RBP21.61■■□□□ 1.05
COL4A2-209ENST00000494852 KNSTRNQ9Y448 316 aa21.61■■□□□ 1.05
COL4A2-209ENST00000494852 AFDNP55196 1824 aaKnown RBP21.6■■□□□ 1.05
COL4A2-209ENST00000494852 GLTPD2A6NH11 291 aa21.6■■□□□ 1.05
COL4A2-209ENST00000494852 SLC39A6Q13433 755 aa21.6■■□□□ 1.05
COL4A2-209ENST00000494852 VSIG10Q8N0Z9 540 aa21.6■■□□□ 1.05
COL4A2-209ENST00000494852 TTLL6Q8N841 843 aa21.6■■□□□ 1.05
COL4A2-209ENST00000494852 BCL2L12Q9HB09 334 aa21.6■■□□□ 1.05
COL4A2-209ENST00000494852 SERPINB2P05120 415 aa21.59■■□□□ 1.05
COL4A2-209ENST00000494852 VEGFAP15692 232 aaPredicted RBP21.59■■□□□ 1.05
COL4A2-209ENST00000494852 ZBTB1Q9Y2K1 713 aa21.59■■□□□ 1.05
COL4A2-209ENST00000494852 DLEC1Q9Y238 1755 aa21.59■■□□□ 1.05
COL4A2-209ENST00000494852 PRELPP51888 382 aa21.58■■□□□ 1.05
COL4A2-209ENST00000494852 H0YIN7 160 aa21.56■■□□□ 1.04
COL4A2-209ENST00000494852 C2CD5Q86YS7 1000 aa21.56■■□□□ 1.04
COL4A2-209ENST00000494852 MTHFSDQ2M296 383 aaKnown RBP21.54■■□□□ 1.04
COL4A2-209ENST00000494852 AMER1Q5JTC6 1135 aaPredicted RBP21.54■■□□□ 1.04
COL4A2-209ENST00000494852 NFKBIEO00221 500 aa21.53■■□□□ 1.04
COL4A2-209ENST00000494852 HMOX1P09601 288 aa21.53■■□□□ 1.04
COL4A2-209ENST00000494852 EIF5P55010 431 aaKnown RBP21.53■■□□□ 1.04
COL4A2-209ENST00000494852 PDZRN3Q9UPQ7 1066 aa21.53■■□□□ 1.04
COL4A2-209ENST00000494852 VIRMAQ69YN4 1812 aaKnown RBP21.52■■□□□ 1.04
COL4A2-209ENST00000494852 CARMIL3Q8ND23 1372 aa21.52■■□□□ 1.04
COL4A2-209ENST00000494852 A0A087WZG4 1122 aa21.52■■□□□ 1.04
COL4A2-209ENST00000494852 STARD3NLO95772 234 aa21.52■■□□□ 1.04
COL4A2-209ENST00000494852 CANXP27824 592 aaKnown RBP21.52■■□□□ 1.04
COL4A2-209ENST00000494852 UBR2Q8IWV8 1755 aa21.51■■□□□ 1.03
COL4A2-209ENST00000494852 DPY19L2Q6NUT2 758 aa21.51■■□□□ 1.03
COL4A2-209ENST00000494852 TNS4Q8IZW8 715 aa21.51■■□□□ 1.03
COL4A2-209ENST00000494852 TIAM2Q8IVF5 1701 aa21.51■■□□□ 1.03
COL4A2-209ENST00000494852 POTECB2RU33 542 aa21.5■■□□□ 1.03
COL4A2-209ENST00000494852 PDE6BP35913 854 aa21.49■■□□□ 1.03
COL4A2-209ENST00000494852 BICDL1Q6ZP65 573 aa21.49■■□□□ 1.03
COL4A2-209ENST00000494852 TTC5Q8N0Z6 440 aa21.49■■□□□ 1.03
COL4A2-209ENST00000494852 BRIP1Q9BX63 1249 aa21.49■■□□□ 1.03
COL4A2-209ENST00000494852 CCDC88AQ3V6T2 1871 aa21.49■■□□□ 1.03
COL4A2-209ENST00000494852 DIAPH1O60610 1272 aaKnown RBP21.48■■□□□ 1.03
COL4A2-209ENST00000494852 TEX13AQ9BXU3 409 aaPredicted RBP21.48■■□□□ 1.03
COL4A2-209ENST00000494852 TBC1D9BQ66K14 1250 aa21.47■■□□□ 1.03
COL4A2-209ENST00000494852 ZNF622Q969S3 477 aaKnown RBP eCLIP21.47■■□□□ 1.03
COL4A2-209ENST00000494852 HSPA1AP0DMV8 641 aaKnown RBP21.46■■□□□ 1.03
COL4A2-209ENST00000494852 HSPA1BP0DMV9 641 aaKnown RBP21.46■■□□□ 1.03
COL4A2-209ENST00000494852 C21orf2O43822 256 aa21.45■■□□□ 1.02
COL4A2-209ENST00000494852 CAPN15O75808 1086 aa21.45■■□□□ 1.02
COL4A2-209ENST00000494852 ERFEQ4G0M1 354 aa21.45■■□□□ 1.02
COL4A2-209ENST00000494852 PRR5LQ6MZQ0 368 aa21.45■■□□□ 1.02
COL4A2-209ENST00000494852 ZNF790Q6PG37 636 aa21.45■■□□□ 1.02
COL4A2-209ENST00000494852 ZNF496Q96IT1 587 aaPredicted RBP21.45■■□□□ 1.02
COL4A2-209ENST00000494852 LTBP3Q9NS15 1303 aa21.45■■□□□ 1.02
COL4A2-209ENST00000494852 ANKRD31Q8N7Z5 1873 aa21.45■■□□□ 1.02
COL4A2-209ENST00000494852 IL6STP40189 918 aaPredicted RBP21.44■■□□□ 1.02
COL4A2-209ENST00000494852 HEG1Q9ULI3 1381 aa21.44■■□□□ 1.02
COL4A2-209ENST00000494852 FER1L6Q2WGJ9 1857 aa21.43■■□□□ 1.02
COL4A2-209ENST00000494852 DICER1Q9UPY3 1922 aaKnown RBP21.43■■□□□ 1.02
COL4A2-209ENST00000494852 TBC1D2BQ9UPU7 963 aa21.43■■□□□ 1.02
COL4A2-209ENST00000494852 SCN7AQ01118 1682 aa21.43■■□□□ 1.02
COL4A2-209ENST00000494852 PER1O15534 1290 aaPredicted RBP21.42■■□□□ 1.02
COL4A2-209ENST00000494852 TEFQ10587 303 aa21.42■■□□□ 1.02
COL4A2-209ENST00000494852 IL17REQ8NFR9 667 aa21.42■■□□□ 1.02
COL4A2-209ENST00000494852 GNAT3A8MTJ3 354 aa21.41■■□□□ 1.02
COL4A2-209ENST00000494852 CNKSR1Q969H4 720 aa21.41■■□□□ 1.02
COL4A2-209ENST00000494852 SETDB2Q96T68 719 aa21.41■■□□□ 1.02
COL4A2-209ENST00000494852 TAOK3Q9H2K8 898 aa21.41■■□□□ 1.02
COL4A2-209ENST00000494852 CREBZFQ9NS37 354 aa21.41■■□□□ 1.02
COL4A2-209ENST00000494852 ZNF219Q9P2Y4 722 aaPredicted RBP21.41■■□□□ 1.02
COL4A2-209ENST00000494852 COL11A2P13942 1736 aaPredicted RBP21.41■■□□□ 1.02
COL4A2-209ENST00000494852 STYK1Q6J9G0 422 aa21.4■■□□□ 1.02
COL4A2-209ENST00000494852 CHADLQ6NUI6 762 aa21.4■■□□□ 1.02
COL4A2-209ENST00000494852 GAS2L2Q8NHY3 880 aa21.4■■□□□ 1.02
COL4A2-209ENST00000494852 KIF7Q2M1P5 1343 aa21.39■■□□□ 1.01
COL4A2-209ENST00000494852 SOGA3Q5TF21 947 aa21.39■■□□□ 1.01
COL4A2-209ENST00000494852 CCDC24Q8N4L8 307 aa21.39■■□□□ 1.01
COL4A2-209ENST00000494852 CNBD1Q8NA66 436 aa21.39■■□□□ 1.01
COL4A2-209ENST00000494852 FMNL2Q96PY5 1086 aa21.39■■□□□ 1.01
COL4A2-209ENST00000494852 ZNF330Q9Y3S2 320 aaPredicted RBP21.39■■□□□ 1.01
COL4A2-209ENST00000494852 CAMTA2O94983 1202 aa21.38■■□□□ 1.01
COL4A2-209ENST00000494852 SRGNP10124 158 aa21.38■■□□□ 1.01
COL4A2-209ENST00000494852 NPM2Q86SE8 214 aaKnown RBP21.38■■□□□ 1.01
COL4A2-209ENST00000494852 SIPA1L3O60292 1781 aaPredicted RBP21.38■■□□□ 1.01
COL4A2-209ENST00000494852 DDNO94850 711 aaPredicted RBP21.37■■□□□ 1.01
COL4A2-209ENST00000494852 A1BGP04217 495 aa21.37■■□□□ 1.01
COL4A2-209ENST00000494852 ST5P78524 1137 aa21.37■■□□□ 1.01
COL4A2-209ENST00000494852 CC2D1BQ5T0F9 858 aaKnown RBP21.37■■□□□ 1.01
COL4A2-209ENST00000494852 PRPF40BQ6NWY9 871 aaKnown RBP21.37■■□□□ 1.01
COL4A2-209ENST00000494852 MASTLQ96GX5 879 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms