RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 ZBTB1Q9Y2K1 713 aa31.28■■■□□ 2.6
COL27A1-208ENST00000494780 UBR2Q8IWV8 1755 aa31.28■■■□□ 2.6
COL27A1-208ENST00000494780 TTC5Q8N0Z6 440 aa31.27■■■□□ 2.6
COL27A1-208ENST00000494780 ARFGEF1Q9Y6D6 1849 aa31.26■■■□□ 2.6
COL27A1-208ENST00000494780 GNAT3A8MTJ3 354 aa31.26■■■□□ 2.59
COL27A1-208ENST00000494780 KIF3CO14782 793 aa31.25■■■□□ 2.59
COL27A1-208ENST00000494780 DALRD3Q5D0E6 543 aaKnown RBP31.25■■■□□ 2.59
COL27A1-208ENST00000494780 TEFQ10587 303 aa31.24■■■□□ 2.59
COL27A1-208ENST00000494780 IL17REQ8NFR9 667 aa31.24■■■□□ 2.59
COL27A1-208ENST00000494780 STARD3NLO95772 234 aa31.23■■■□□ 2.59
COL27A1-208ENST00000494780 NFIXQ14938 502 aa31.23■■■□□ 2.59
COL27A1-208ENST00000494780 HSPA6P17066 643 aa31.22■■■□□ 2.59
COL27A1-208ENST00000494780 CHRNA5P30532 468 aa31.22■■■□□ 2.59
COL27A1-208ENST00000494780 CFAP53Q96M91 514 aa31.21■■■□□ 2.59
COL27A1-208ENST00000494780 CANXP27824 592 aaKnown RBP31.2■■■□□ 2.59
COL27A1-208ENST00000494780 ZNF790Q6PG37 636 aa31.2■■■□□ 2.59
COL27A1-208ENST00000494780 BCL2L12Q9HB09 334 aa31.2■■■□□ 2.59
COL27A1-208ENST00000494780 ZNF496Q96IT1 587 aaPredicted RBP31.19■■■□□ 2.58
COL27A1-208ENST00000494780 TEX13AQ9BXU3 409 aaPredicted RBP31.19■■■□□ 2.58
COL27A1-208ENST00000494780 HEG1Q9ULI3 1381 aa31.18■■■□□ 2.58
COL27A1-208ENST00000494780 A0A087WZG4 1122 aa31.18■■■□□ 2.58
COL27A1-208ENST00000494780 C9orf131Q5VYM1 1079 aa31.18■■■□□ 2.58
COL27A1-208ENST00000494780 NRXN2Q9P2S2 1712 aa31.18■■■□□ 2.58
COL27A1-208ENST00000494780 EIF5P55010 431 aaKnown RBP31.17■■■□□ 2.58
COL27A1-208ENST00000494780 SIPA1L3O60292 1781 aaPredicted RBP31.17■■■□□ 2.58
COL27A1-208ENST00000494780 SERPINB2P05120 415 aa31.16■■■□□ 2.58
COL27A1-208ENST00000494780 PRKAR2BP31323 418 aa31.16■■■□□ 2.58
COL27A1-208ENST00000494780 AFDNP55196 1824 aaKnown RBP31.16■■■□□ 2.58
COL27A1-208ENST00000494780 CEMIPQ8WUJ3 1361 aa31.16■■■□□ 2.58
COL27A1-208ENST00000494780 PHACTR3Q96KR7 559 aa31.15■■■□□ 2.58
COL27A1-208ENST00000494780 RSPH6AQ9H0K4 717 aa31.15■■■□□ 2.58
COL27A1-208ENST00000494780 NUDCQ9Y266 331 aa31.15■■■□□ 2.58
COL27A1-208ENST00000494780 FMNL2Q96PY5 1086 aa31.13■■■□□ 2.57
COL27A1-208ENST00000494780 TOMM70O94826 608 aa31.12■■■□□ 2.57
COL27A1-208ENST00000494780 NMRK2Q9NPI5 230 aa31.1■■■□□ 2.57
COL27A1-208ENST00000494780 RNF181Q9P0P0 153 aa31.1■■■□□ 2.57
COL27A1-208ENST00000494780 PPP2R1AP30153 589 aa31.09■■■□□ 2.57
COL27A1-208ENST00000494780 IL6STP40189 918 aaPredicted RBP31.09■■■□□ 2.57
COL27A1-208ENST00000494780 BTBD11A6QL63 1104 aa31.08■■■□□ 2.57
COL27A1-208ENST00000494780 BICDL1Q6ZP65 573 aa31.08■■■□□ 2.57
COL27A1-208ENST00000494780 U2AF1L5P0DN76 240 aaPredicted RBP31.07■■■□□ 2.56
COL27A1-208ENST00000494780 U2AF1Q01081 240 aaKnown RBP eCLIP31.07■■■□□ 2.56
COL27A1-208ENST00000494780 DLEC1Q9Y238 1755 aa31.07■■■□□ 2.56
COL27A1-208ENST00000494780 C2CD5Q86YS7 1000 aa31.06■■■□□ 2.56
COL27A1-208ENST00000494780 ZNF330Q9Y3S2 320 aaPredicted RBP31.06■■■□□ 2.56
COL27A1-208ENST00000494780 CEP350Q5VT06 3117 aa31.06■■■□□ 2.56
COL27A1-208ENST00000494780 SCN7AQ01118 1682 aa31.06■■■□□ 2.56
COL27A1-208ENST00000494780 KDM2BQ8NHM5 1336 aa31.05■■■□□ 2.56
COL27A1-208ENST00000494780 H0YIN7 160 aa31.05■■■□□ 2.56
COL27A1-208ENST00000494780 TBC1D9BQ66K14 1250 aa31.05■■■□□ 2.56
COL27A1-208ENST00000494780 TTLL6Q8N841 843 aa31.05■■■□□ 2.56
COL27A1-208ENST00000494780 TBC1D2BQ9UPU7 963 aa31.05■■■□□ 2.56
COL27A1-208ENST00000494780 CARMIL3Q8ND23 1372 aa31.05■■■□□ 2.56
COL27A1-208ENST00000494780 KCNQ3O43525 872 aa31.04■■■□□ 2.56
COL27A1-208ENST00000494780 A1BGP04217 495 aa31.04■■■□□ 2.56
COL27A1-208ENST00000494780 NPM2Q86SE8 214 aaKnown RBP31.04■■■□□ 2.56
COL27A1-208ENST00000494780 RTF1Q92541 710 aaKnown RBP31.04■■■□□ 2.56
COL27A1-208ENST00000494780 SBF1O95248 1867 aa31.04■■■□□ 2.56
COL27A1-208ENST00000494780 APLP1P51693 650 aa31.02■■■□□ 2.56
COL27A1-208ENST00000494780 PDZRN3Q9UPQ7 1066 aa31.02■■■□□ 2.56
COL27A1-208ENST00000494780 ZC3H4Q9UPT8 1303 aaKnown RBP31■■■□□ 2.55
COL27A1-208ENST00000494780 RASSF7Q02833 373 aa31■■■□□ 2.55
COL27A1-208ENST00000494780 C16orf71Q8IYS4 520 aaPredicted RBP31■■■□□ 2.55
COL27A1-208ENST00000494780 RBM46Q8TBY0 533 aaKnown RBP31■■■□□ 2.55
COL27A1-208ENST00000494780 BRIP1Q9BX63 1249 aa31■■■□□ 2.55
COL27A1-208ENST00000494780 HTATSF1O43719 755 aaKnown RBP30.99■■■□□ 2.55
COL27A1-208ENST00000494780 MCM10Q7L590 875 aa30.99■■■□□ 2.55
COL27A1-208ENST00000494780 CAMTA2O94983 1202 aa30.98■■■□□ 2.55
COL27A1-208ENST00000494780 LMNB1P20700 586 aa30.98■■■□□ 2.55
COL27A1-208ENST00000494780 PDE6BP35913 854 aa30.98■■■□□ 2.55
COL27A1-208ENST00000494780 PRR5LQ6MZQ0 368 aa30.98■■■□□ 2.55
COL27A1-208ENST00000494780 USP16Q9Y5T5 823 aa30.98■■■□□ 2.55
COL27A1-208ENST00000494780 SETDB2Q96T68 719 aa30.97■■■□□ 2.55
COL27A1-208ENST00000494780 ANKRD31Q8N7Z5 1873 aa30.96■■■□□ 2.55
COL27A1-208ENST00000494780 SNRPA1P09661 255 aaKnown RBP30.96■■■□□ 2.55
COL27A1-208ENST00000494780 DZIP3Q86Y13 1208 aaKnown RBP30.96■■■□□ 2.55
COL27A1-208ENST00000494780 RRAGCQ9HB90 399 aa30.95■■■□□ 2.55
COL27A1-208ENST00000494780 TNRC6CQ9HCJ0 1690 aaKnown RBP30.94■■■□□ 2.54
COL27A1-208ENST00000494780 ZNF622Q969S3 477 aaKnown RBP eCLIP30.94■■■□□ 2.54
COL27A1-208ENST00000494780 BCORQ6W2J9 1755 aa30.93■■■□□ 2.54
COL27A1-208ENST00000494780 DCTN1Q14203 1278 aa30.93■■■□□ 2.54
COL27A1-208ENST00000494780 PRAMEF22A3QJZ6 481 aa30.92■■■□□ 2.54
COL27A1-208ENST00000494780 PRELPP51888 382 aa30.92■■■□□ 2.54
COL27A1-208ENST00000494780 FSTL1Q12841 308 aa30.92■■■□□ 2.54
COL27A1-208ENST00000494780 CNBD1Q8NA66 436 aa30.92■■■□□ 2.54
COL27A1-208ENST00000494780 NFKBIEO00221 500 aa30.91■■■□□ 2.54
COL27A1-208ENST00000494780 CCDC24Q8N4L8 307 aa30.91■■■□□ 2.54
COL27A1-208ENST00000494780 NPHP1O15259 732 aa30.9■■■□□ 2.54
COL27A1-208ENST00000494780 PIP4K2AP48426 406 aaPredicted RBP30.9■■■□□ 2.54
COL27A1-208ENST00000494780 ST5P78524 1137 aa30.9■■■□□ 2.54
COL27A1-208ENST00000494780 CLEC4GQ6UXB4 293 aa30.9■■■□□ 2.54
COL27A1-208ENST00000494780 TAF7Q15545 349 aaPredicted RBP30.89■■■□□ 2.54
COL27A1-208ENST00000494780 COL11A2P13942 1736 aaPredicted RBP30.88■■■□□ 2.53
COL27A1-208ENST00000494780 GLTPD2A6NH11 291 aa30.88■■■□□ 2.53
COL27A1-208ENST00000494780 ZNF652Q9Y2D9 606 aa30.88■■■□□ 2.53
COL27A1-208ENST00000494780 NEFMP07197 916 aa30.87■■■□□ 2.53
COL27A1-208ENST00000494780 DNAJC5GQ8N7S2 189 aa30.87■■■□□ 2.53
COL27A1-208ENST00000494780 RGL2O15211 777 aa30.86■■■□□ 2.53
COL27A1-208ENST00000494780 C21orf2O43822 256 aa30.86■■■□□ 2.53
COL27A1-208ENST00000494780 STYK1Q6J9G0 422 aa30.86■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms