RNA–Protein interactions for RNA: ENST00000494727.1

ACSS2-223, Transcript of acyl-CoA synthetase short chain family member 2, human

TSL 2

Gene ACSS2, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSS2-223	ENST00000494727	CFAP44	Q96MT7	982 aa		13.34	□□□□□ -0.27
ACSS2-223	ENST00000494727	TMOD3	Q9NYL9	352 aa		13.34	□□□□□ -0.27
ACSS2-223	ENST00000494727	C1orf141	Q5JVX7	400 aa		13.33	□□□□□ -0.28
ACSS2-223	ENST00000494727	PIGB	Q92521	554 aa		13.33	□□□□□ -0.28
ACSS2-223	ENST00000494727	KDM6A	O15550	1401 aa	Predicted RBP	13.32	□□□□□ -0.28
ACSS2-223	ENST00000494727	PPP2R1A	P30153	589 aa		13.32	□□□□□ -0.28
ACSS2-223	ENST00000494727	DDX10	Q13206	875 aa	Known RBP	13.32	□□□□□ -0.28
ACSS2-223	ENST00000494727	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.32	□□□□□ -0.28
ACSS2-223	ENST00000494727	KDR	P35968	1356 aa		13.32	□□□□□ -0.28
ACSS2-223	ENST00000494727	SRCAP	Q6ZRS2	3230 aa		13.31	□□□□□ -0.28
ACSS2-223	ENST00000494727	CASZ1	Q86V15	1759 aa		13.31	□□□□□ -0.28
ACSS2-223	ENST00000494727	AMOT	Q4VCS5	1084 aa		13.31	□□□□□ -0.28
ACSS2-223	ENST00000494727	SLC27A3	Q5K4L6	730 aa		13.31	□□□□□ -0.28
ACSS2-223	ENST00000494727	MICALL2	Q8IY33	904 aa		13.31	□□□□□ -0.28
ACSS2-223	ENST00000494727	CFAP53	Q96M91	514 aa		13.31	□□□□□ -0.28
ACSS2-223	ENST00000494727	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.31	□□□□□ -0.28
ACSS2-223	ENST00000494727	LY75	O60449	1722 aa		13.3	□□□□□ -0.28
ACSS2-223	ENST00000494727	ITGB4	P16144	1822 aa		13.3	□□□□□ -0.28
ACSS2-223	ENST00000494727		G3V3G9	751 aa		13.3	□□□□□ -0.28
ACSS2-223	ENST00000494727	SPON1	Q9HCB6	807 aa		13.3	□□□□□ -0.28
ACSS2-223	ENST00000494727	TFCP2L1	Q9NZI6	479 aa		13.3	□□□□□ -0.28
ACSS2-223	ENST00000494727	ASAP1	Q9ULH1	1129 aa		13.3	□□□□□ -0.28
ACSS2-223	ENST00000494727	HSP90AB1	P08238	724 aa	Known RBP	13.29	□□□□□ -0.28
ACSS2-223	ENST00000494727	CABP4	P57796	275 aa		13.29	□□□□□ -0.28
ACSS2-223	ENST00000494727	PLCB2	Q00722	1185 aa		13.28	□□□□□ -0.28
ACSS2-223	ENST00000494727	SMARCC1	Q92922	1105 aa	Predicted RBP	13.28	□□□□□ -0.28
ACSS2-223	ENST00000494727	DCAF5	Q96JK2	942 aa		13.28	□□□□□ -0.28
ACSS2-223	ENST00000494727	PLEKHG2	Q9H7P9	1386 aa		13.28	□□□□□ -0.28
ACSS2-223	ENST00000494727	MTHFSD	Q2M296	383 aa	Known RBP	13.27	□□□□□ -0.29
ACSS2-223	ENST00000494727	SMIM5	Q71RC9	77 aa		13.27	□□□□□ -0.29
ACSS2-223	ENST00000494727	PNPLA7	Q6ZV29	1317 aa		13.27	□□□□□ -0.29
ACSS2-223	ENST00000494727	C5	P01031	1676 aa		13.27	□□□□□ -0.29
ACSS2-223	ENST00000494727	LOC102724428	A0A0B4J2F2	783 aa		13.26	□□□□□ -0.29
ACSS2-223	ENST00000494727	PHF14	O94880	888 aa		13.26	□□□□□ -0.29
ACSS2-223	ENST00000494727	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.26	□□□□□ -0.29
ACSS2-223	ENST00000494727	PRKAR2B	P31323	418 aa		13.26	□□□□□ -0.29
ACSS2-223	ENST00000494727	SIK1	P57059	783 aa		13.26	□□□□□ -0.29
ACSS2-223	ENST00000494727	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
ACSS2-223	ENST00000494727	AKAP4	Q5JQC9	854 aa		13.26	□□□□□ -0.29
ACSS2-223	ENST00000494727	MAMSTR	Q6ZN01	415 aa		13.26	□□□□□ -0.29
ACSS2-223	ENST00000494727	TUBGCP6	Q96RT7	1819 aa		13.26	□□□□□ -0.29
ACSS2-223	ENST00000494727	ATG3	Q9NT62	314 aa		13.26	□□□□□ -0.29
ACSS2-223	ENST00000494727	ERVV-2	B6SEH9	535 aa		13.25	□□□□□ -0.29
ACSS2-223	ENST00000494727	ZEB1	P37275	1124 aa	Predicted RBP	13.25	□□□□□ -0.29
ACSS2-223	ENST00000494727	ATP6V1A	P38606	617 aa		13.25	□□□□□ -0.29
ACSS2-223	ENST00000494727	LINC00116	Q8NCU8	138 aa		13.25	□□□□□ -0.29
ACSS2-223	ENST00000494727	AK7	Q96M32	723 aa		13.25	□□□□□ -0.29
ACSS2-223	ENST00000494727	LGR6	Q9HBX8	967 aa		13.25	□□□□□ -0.29
ACSS2-223	ENST00000494727	NUDC	Q9Y266	331 aa		13.25	□□□□□ -0.29
ACSS2-223	ENST00000494727	ITPK1	Q13572	414 aa		13.24	□□□□□ -0.29
ACSS2-223	ENST00000494727	MSL1	Q68DK7	614 aa		13.24	□□□□□ -0.29
ACSS2-223	ENST00000494727	NFATC2IP	Q8NCF5	419 aa		13.24	□□□□□ -0.29
ACSS2-223	ENST00000494727	MTFR1L	Q9H019	292 aa		13.24	□□□□□ -0.29
ACSS2-223	ENST00000494727	C4B	P0C0L5	1744 aa		13.24	□□□□□ -0.29
ACSS2-223	ENST00000494727	RNMT	O43148	476 aa	Known RBP	13.23	□□□□□ -0.29
ACSS2-223	ENST00000494727	PTCD1	O75127	700 aa	Known RBP	13.23	□□□□□ -0.29
ACSS2-223	ENST00000494727	C3orf67	Q6ZVT6	689 aa		13.23	□□□□□ -0.29
ACSS2-223	ENST00000494727	RSPH6A	Q9H0K4	717 aa		13.23	□□□□□ -0.29
ACSS2-223	ENST00000494727	MAP3K5	Q99683	1374 aa		13.22	□□□□□ -0.29
ACSS2-223	ENST00000494727	PTGER2	P43116	358 aa		13.22	□□□□□ -0.29
ACSS2-223	ENST00000494727	AMIGO3	Q86WK7	504 aa		13.22	□□□□□ -0.29
ACSS2-223	ENST00000494727	COL23A1	Q86Y22	540 aa	Predicted RBP	13.22	□□□□□ -0.29
ACSS2-223	ENST00000494727	SCUBE2	Q9NQ36	999 aa		13.22	□□□□□ -0.29
ACSS2-223	ENST00000494727	GNPAT	O15228	680 aa		13.21	□□□□□ -0.29
ACSS2-223	ENST00000494727	SLC39A6	Q13433	755 aa		13.21	□□□□□ -0.29
ACSS2-223	ENST00000494727	GAS2L2	Q8NHY3	880 aa		13.21	□□□□□ -0.29
ACSS2-223	ENST00000494727	OTUD5	Q96G74	571 aa		13.21	□□□□□ -0.29
ACSS2-223	ENST00000494727	PHACTR3	Q96KR7	559 aa		13.21	□□□□□ -0.29
ACSS2-223	ENST00000494727	SLC4A9	Q96Q91	983 aa		13.21	□□□□□ -0.29
ACSS2-223	ENST00000494727	SLC52A2	Q9HAB3	445 aa		13.21	□□□□□ -0.29
ACSS2-223	ENST00000494727	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.21	□□□□□ -0.29
ACSS2-223	ENST00000494727	TAF1L	Q8IZX4	1826 aa		13.2	□□□□□ -0.3
ACSS2-223	ENST00000494727	SCN11A	Q9UI33	1791 aa		13.2	□□□□□ -0.3
ACSS2-223	ENST00000494727	MRC1	P22897	1456 aa		13.2	□□□□□ -0.3
ACSS2-223	ENST00000494727	QSER1	Q2KHR3	1735 aa		13.19	□□□□□ -0.3
ACSS2-223	ENST00000494727	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.18	□□□□□ -0.3
ACSS2-223	ENST00000494727	GNAT3	A8MTJ3	354 aa		13.18	□□□□□ -0.3
ACSS2-223	ENST00000494727	POLD1	P28340	1107 aa		13.18	□□□□□ -0.3
ACSS2-223	ENST00000494727	RALBP1	Q15311	655 aa		13.18	□□□□□ -0.3
ACSS2-223	ENST00000494727	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.18	□□□□□ -0.3
ACSS2-223	ENST00000494727	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.17	□□□□□ -0.3
ACSS2-223	ENST00000494727	TEF	Q10587	303 aa		13.17	□□□□□ -0.3
ACSS2-223	ENST00000494727	ARX	Q96QS3	562 aa		13.17	□□□□□ -0.3
ACSS2-223	ENST00000494727	DCTN1	Q14203	1278 aa		13.16	□□□□□ -0.3
ACSS2-223	ENST00000494727	MCM10	Q7L590	875 aa		13.16	□□□□□ -0.3
ACSS2-223	ENST00000494727	IL17RE	Q8NFR9	667 aa		13.16	□□□□□ -0.3
ACSS2-223	ENST00000494727	SLC16A10	Q8TF71	515 aa		13.16	□□□□□ -0.3
ACSS2-223	ENST00000494727	VIRMA	Q69YN4	1812 aa	Known RBP	13.16	□□□□□ -0.3
ACSS2-223	ENST00000494727	ADAMTS7	Q9UKP4	1686 aa		13.15	□□□□□ -0.3
ACSS2-223	ENST00000494727	KCP	Q6ZWJ8	1503 aa		13.15	□□□□□ -0.3
ACSS2-223	ENST00000494727	UBR3	Q6ZT12	1888 aa		13.15	□□□□□ -0.3
ACSS2-223	ENST00000494727	FCHSD2	O94868	740 aa		13.15	□□□□□ -0.3
ACSS2-223	ENST00000494727	NEFM	P07197	916 aa		13.15	□□□□□ -0.3
ACSS2-223	ENST00000494727	SSFA2	P28290	1259 aa		13.15	□□□□□ -0.3
ACSS2-223	ENST00000494727	CRKL	P46109	303 aa	Known RBP	13.15	□□□□□ -0.3
ACSS2-223	ENST00000494727	DNAJC10	Q8IXB1	793 aa		13.15	□□□□□ -0.3
ACSS2-223	ENST00000494727	TTC5	Q8N0Z6	440 aa		13.15	□□□□□ -0.3
ACSS2-223	ENST00000494727	RTF1	Q92541	710 aa	Known RBP	13.15	□□□□□ -0.3
ACSS2-223	ENST00000494727	RTCB	Q9Y3I0	505 aa	Known RBP	13.15	□□□□□ -0.3
ACSS2-223	ENST00000494727	TJP1	Q07157	1748 aa		13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms