RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 PCDH11YQ9BZA8 1340 aa13.26□□□□□ -0.29
PRPF4B-209ENST00000494674 KCPQ6ZWJ8 1503 aa13.26□□□□□ -0.29
PRPF4B-209ENST00000494674 DDRGK1Q96HY6 314 aa13.26□□□□□ -0.29
PRPF4B-209ENST00000494674 ZNF496Q96IT1 587 aaPredicted RBP13.26□□□□□ -0.29
PRPF4B-209ENST00000494674 PHLPP1O60346 1717 aa13.26□□□□□ -0.29
PRPF4B-209ENST00000494674 ARFGEF2Q9Y6D5 1785 aa13.26□□□□□ -0.29
PRPF4B-209ENST00000494674 NKX1-1Q15270 411 aaPredicted RBP13.25□□□□□ -0.29
PRPF4B-209ENST00000494674 PLEKHM2Q8IWE5 1019 aa13.25□□□□□ -0.29
PRPF4B-209ENST00000494674 ZCRB1Q8TBF4 217 aaKnown RBP13.25□□□□□ -0.29
PRPF4B-209ENST00000494674 TBC1D32Q96NH3 1257 aa13.25□□□□□ -0.29
PRPF4B-209ENST00000494674 SRCIN1Q9C0H9 1055 aa13.25□□□□□ -0.29
PRPF4B-209ENST00000494674 DDX21Q9NR30 783 aaKnown RBP eCLIP13.25□□□□□ -0.29
PRPF4B-209ENST00000494674 LRRFIP2Q9Y608 721 aaKnown RBP13.25□□□□□ -0.29
PRPF4B-209ENST00000494674 ITGB4P16144 1822 aa13.25□□□□□ -0.29
PRPF4B-209ENST00000494674 NRAPQ86VF7 1730 aa13.25□□□□□ -0.29
PRPF4B-209ENST00000494674 DISP2A7MBM2 1401 aa13.25□□□□□ -0.29
PRPF4B-209ENST00000494674 PNMA6EA0A0J9YXQ4 647 aa13.25□□□□□ -0.29
PRPF4B-209ENST00000494674 HMMRO75330 724 aa13.25□□□□□ -0.29
PRPF4B-209ENST00000494674 IL2RBP14784 551 aa13.25□□□□□ -0.29
PRPF4B-209ENST00000494674 ATP8B2P98198 1209 aa13.25□□□□□ -0.29
PRPF4B-209ENST00000494674 LRP10Q7Z4F1 713 aa13.24□□□□□ -0.29
PRPF4B-209ENST00000494674 C16orf71Q8IYS4 520 aaPredicted RBP13.24□□□□□ -0.29
PRPF4B-209ENST00000494674 OTUD7AQ8TE49 926 aaPredicted RBP13.24□□□□□ -0.29
PRPF4B-209ENST00000494674 STRN4Q9NRL3 753 aa13.24□□□□□ -0.29
PRPF4B-209ENST00000494674 HYPKQ9NX55 129 aa13.24□□□□□ -0.29
PRPF4B-209ENST00000494674 TNS2Q63HR2 1409 aa13.23□□□□□ -0.29
PRPF4B-209ENST00000494674 NUP188Q5SRE5 1749 aa13.23□□□□□ -0.29
PRPF4B-209ENST00000494674 UBTFL1P0CB47 393 aaPredicted RBP13.23□□□□□ -0.29
PRPF4B-209ENST00000494674 GSPT1P15170 499 aaKnown RBP13.23□□□□□ -0.29
PRPF4B-209ENST00000494674 KSR2Q6VAB6 950 aa13.23□□□□□ -0.29
PRPF4B-209ENST00000494674 AFDNP55196 1824 aaKnown RBP13.23□□□□□ -0.29
PRPF4B-209ENST00000494674 IBTKQ9P2D0 1353 aaPredicted RBP13.23□□□□□ -0.29
PRPF4B-209ENST00000494674 SMARCA5O60264 1052 aaPredicted RBP13.22□□□□□ -0.29
PRPF4B-209ENST00000494674 NBPF7P0C2Y1 421 aaPredicted RBP13.22□□□□□ -0.29
PRPF4B-209ENST00000494674 ERICH6Q7L0X2 663 aa13.22□□□□□ -0.29
PRPF4B-209ENST00000494674 MAP3K2Q9Y2U5 619 aa13.22□□□□□ -0.29
PRPF4B-209ENST00000494674 CABP4P57796 275 aa13.22□□□□□ -0.29
PRPF4B-209ENST00000494674 SSH3Q8TE77 659 aa13.22□□□□□ -0.29
PRPF4B-209ENST00000494674 SALL3Q9BXA9 1300 aa13.21□□□□□ -0.29
PRPF4B-209ENST00000494674 ERVV-2B6SEH9 535 aa13.21□□□□□ -0.3
PRPF4B-209ENST00000494674 ALDH1L1O75891 902 aa13.21□□□□□ -0.3
PRPF4B-209ENST00000494674 SNRPA1P09661 255 aaKnown RBP13.21□□□□□ -0.3
PRPF4B-209ENST00000494674 POLA2Q14181 598 aa13.21□□□□□ -0.3
PRPF4B-209ENST00000494674 TTC22Q5TAA0 569 aa13.21□□□□□ -0.3
PRPF4B-209ENST00000494674 FMNL2Q96PY5 1086 aa13.21□□□□□ -0.3
PRPF4B-209ENST00000494674 BTG4Q9NY30 223 aa13.21□□□□□ -0.3
PRPF4B-209ENST00000494674 EXOC6BQ9Y2D4 811 aa13.21□□□□□ -0.3
PRPF4B-209ENST00000494674 LRP6O75581 1613 aa13.21□□□□□ -0.3
PRPF4B-209ENST00000494674 EVA1CP58658 441 aa13.2□□□□□ -0.3
PRPF4B-209ENST00000494674 TTC5Q8N0Z6 440 aa13.2□□□□□ -0.3
PRPF4B-209ENST00000494674 USP16Q9Y5T5 823 aa13.2□□□□□ -0.3
PRPF4B-209ENST00000494674 APBB1O00213 710 aa13.19□□□□□ -0.3
PRPF4B-209ENST00000494674 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.19□□□□□ -0.3
PRPF4B-209ENST00000494674 UTYO14607 1347 aa13.19□□□□□ -0.3
PRPF4B-209ENST00000494674 MFAP1P55081 439 aaKnown RBP13.19□□□□□ -0.3
PRPF4B-209ENST00000494674 TBC1D9Q6ZT07 1266 aa13.19□□□□□ -0.3
PRPF4B-209ENST00000494674 UPF2Q9HAU5 1272 aaKnown RBP13.19□□□□□ -0.3
PRPF4B-209ENST00000494674 SLC4A3P48751 1232 aa13.18□□□□□ -0.3
PRPF4B-209ENST00000494674 C1QBPQ07021 282 aaKnown RBP13.18□□□□□ -0.3
PRPF4B-209ENST00000494674 MTX1Q13505 466 aa13.18□□□□□ -0.3
PRPF4B-209ENST00000494674 CWF19L2Q2TBE0 894 aaKnown RBP13.18□□□□□ -0.3
PRPF4B-209ENST00000494674 PPP1R42Q7Z4L9 355 aa13.18□□□□□ -0.3
PRPF4B-209ENST00000494674 LINS1Q8NG48 757 aa13.18□□□□□ -0.3
PRPF4B-209ENST00000494674 XAGE3Q8WTP9 111 aa13.18□□□□□ -0.3
PRPF4B-209ENST00000494674 OSBPL3Q9H4L5 887 aa13.18□□□□□ -0.3
PRPF4B-209ENST00000494674 TJP1Q07157 1748 aa13.18□□□□□ -0.3
PRPF4B-209ENST00000494674 NWD2Q9ULI1 1742 aa13.18□□□□□ -0.3
PRPF4B-209ENST00000494674 DDX58O95786 925 aaKnown RBP13.17□□□□□ -0.3
PRPF4B-209ENST00000494674 IGKV5-2P06315 115 aa13.17□□□□□ -0.3
PRPF4B-209ENST00000494674 MYL6BP14649 208 aa13.17□□□□□ -0.3
PRPF4B-209ENST00000494674 C22orf23Q9BZE7 217 aa13.17□□□□□ -0.3
PRPF4B-209ENST00000494674 AK9Q5TCS8 1911 aa13.16□□□□□ -0.3
PRPF4B-209ENST00000494674 CDC45O75419 566 aa13.16□□□□□ -0.3
PRPF4B-209ENST00000494674 AIMP1Q12904 312 aaKnown RBP13.16□□□□□ -0.3
PRPF4B-209ENST00000494674 DDX54Q8TDD1 881 aaKnown RBP13.16□□□□□ -0.3
PRPF4B-209ENST00000494674 KAZALD1Q96I82 304 aa13.16□□□□□ -0.3
PRPF4B-209ENST00000494674 LRRCC1Q9C099 1032 aa13.16□□□□□ -0.3
PRPF4B-209ENST00000494674 DOT1LQ8TEK3 1739 aa13.16□□□□□ -0.3
PRPF4B-209ENST00000494674 ERBB4Q15303 1308 aa13.16□□□□□ -0.3
PRPF4B-209ENST00000494674 NBPF26B4DH59 902 aa13.16□□□□□ -0.3
PRPF4B-209ENST00000494674 PIP4K2AP48426 406 aaPredicted RBP13.16□□□□□ -0.3
PRPF4B-209ENST00000494674 PDE1AP54750 535 aa13.16□□□□□ -0.3
PRPF4B-209ENST00000494674 NBPF14Q5TI25 921 aa13.16□□□□□ -0.3
PRPF4B-209ENST00000494674 NBPF10Q6P3W6 841 aaKnown RBP13.16□□□□□ -0.3
PRPF4B-209ENST00000494674 COPS6Q7L5N1 327 aa13.16□□□□□ -0.3
PRPF4B-209ENST00000494674 NBPF15Q8N660 670 aa13.16□□□□□ -0.3
PRPF4B-209ENST00000494674 USP35Q9P2H5 1018 aa13.16□□□□□ -0.3
PRPF4B-209ENST00000494674 GRM8O00222 908 aa13.15□□□□□ -0.3
PRPF4B-209ENST00000494674 SRGAP3O43295 1099 aa13.15□□□□□ -0.3
PRPF4B-209ENST00000494674 SDSP20132 328 aa13.15□□□□□ -0.3
PRPF4B-209ENST00000494674 RBM25P49756 843 aaKnown RBP13.15□□□□□ -0.3
PRPF4B-209ENST00000494674 NEURL1BA8MQ27 555 aa13.14□□□□□ -0.31
PRPF4B-209ENST00000494674 METTL22Q9BUU2 404 aaPredicted RBP13.14□□□□□ -0.31
PRPF4B-209ENST00000494674 RIC3Q7Z5B4 369 aa13.13□□□□□ -0.31
PRPF4B-209ENST00000494674 C9orf78Q9NZ63 289 aaPredicted RBP13.13□□□□□ -0.31
PRPF4B-209ENST00000494674 STAP2Q9UGK3 403 aa13.13□□□□□ -0.31
PRPF4B-209ENST00000494674 RAB11FIP3O75154 756 aa13.13□□□□□ -0.31
PRPF4B-209ENST00000494674 ANKRD13DQ6ZTN6 518 aa13.13□□□□□ -0.31
PRPF4B-209ENST00000494674 SUCLG2Q96I99 432 aa13.13□□□□□ -0.31
PRPF4B-209ENST00000494674 BCL11AQ9H165 835 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms