RNA–Protein interactions for RNA: ENST00000494340.1

LINC02008-202, Transcript of long intergenic non-protein coding RNA 2008, humanhuman

TSL 2

Gene LINC02008, Length 524 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02008-202ENST00000494340 DDR1Q08345 913 aa12.98□□□□□ -0.33
LINC02008-202ENST00000494340 IL17REQ8NFR9 667 aa12.98□□□□□ -0.33
LINC02008-202ENST00000494340 RSPH6AQ9H0K4 717 aa12.98□□□□□ -0.33
LINC02008-202ENST00000494340 GPBP1L1Q9HC44 474 aaPredicted RBP12.98□□□□□ -0.33
LINC02008-202ENST00000494340 ZBTB1Q9Y2K1 713 aa12.98□□□□□ -0.33
LINC02008-202ENST00000494340 HEG1Q9ULI3 1381 aa12.97□□□□□ -0.33
LINC02008-202ENST00000494340 A0A087WZG4 1122 aa12.97□□□□□ -0.33
LINC02008-202ENST00000494340 KCNA3P22001 575 aa12.97□□□□□ -0.33
LINC02008-202ENST00000494340 PPP2R1AP30153 589 aa12.97□□□□□ -0.33
LINC02008-202ENST00000494340 USPL1Q5W0Q7 1092 aa12.97□□□□□ -0.33
LINC02008-202ENST00000494340 ZNF790Q6PG37 636 aa12.97□□□□□ -0.33
LINC02008-202ENST00000494340 PIM2Q9P1W9 311 aa12.97□□□□□ -0.33
LINC02008-202ENST00000494340 BCS1LQ9Y276 419 aa12.97□□□□□ -0.33
LINC02008-202ENST00000494340 AFDNP55196 1824 aaKnown RBP12.97□□□□□ -0.33
LINC02008-202ENST00000494340 SENP3-EIF4A1A0A087X0R7 540 aa12.96□□□□□ -0.33
LINC02008-202ENST00000494340 FCHSD2O94868 740 aa12.96□□□□□ -0.33
LINC02008-202ENST00000494340 PRKAR2BP31323 418 aa12.96□□□□□ -0.33
LINC02008-202ENST00000494340 EIF5P55010 431 aaKnown RBP12.96□□□□□ -0.33
LINC02008-202ENST00000494340 DLEC1Q9Y238 1755 aa12.95□□□□□ -0.34
LINC02008-202ENST00000494340 HTATSF1O43719 755 aaKnown RBP12.95□□□□□ -0.34
LINC02008-202ENST00000494340 ZNF496Q96IT1 587 aaPredicted RBP12.95□□□□□ -0.34
LINC02008-202ENST00000494340 FMNL2Q96PY5 1086 aa12.95□□□□□ -0.34
LINC02008-202ENST00000494340 SCN7AQ01118 1682 aa12.95□□□□□ -0.34
LINC02008-202ENST00000494340 IL6STP40189 918 aaPredicted RBP12.94□□□□□ -0.34
LINC02008-202ENST00000494340 NFIXQ14938 502 aa12.94□□□□□ -0.34
LINC02008-202ENST00000494340 DALRD3Q5D0E6 543 aaKnown RBP12.94□□□□□ -0.34
LINC02008-202ENST00000494340 PHACTR3Q96KR7 559 aa12.94□□□□□ -0.34
LINC02008-202ENST00000494340 BCL2L12Q9HB09 334 aa12.94□□□□□ -0.34
LINC02008-202ENST00000494340 WWC3Q9ULE0 1092 aa12.94□□□□□ -0.34
LINC02008-202ENST00000494340 BTBD11A6QL63 1104 aa12.93□□□□□ -0.34
LINC02008-202ENST00000494340 U2AF1L5P0DN76 240 aaPredicted RBP12.93□□□□□ -0.34
LINC02008-202ENST00000494340 U2AF1Q01081 240 aaKnown RBP eCLIP12.93□□□□□ -0.34
LINC02008-202ENST00000494340 CNGB1Q14028 1251 aaPredicted RBP12.93□□□□□ -0.34
LINC02008-202ENST00000494340 PDZRN3Q9UPQ7 1066 aa12.93□□□□□ -0.34
LINC02008-202ENST00000494340 SERPINB2P05120 415 aa12.92□□□□□ -0.34
LINC02008-202ENST00000494340 CANXP27824 592 aaKnown RBP12.92□□□□□ -0.34
LINC02008-202ENST00000494340 ARHGAP27Q6ZUM4 889 aa12.92□□□□□ -0.34
LINC02008-202ENST00000494340 RTF1Q92541 710 aaKnown RBP12.92□□□□□ -0.34
LINC02008-202ENST00000494340 RGL2O15211 777 aa12.91□□□□□ -0.34
LINC02008-202ENST00000494340 BCORQ6W2J9 1755 aa12.91□□□□□ -0.34
LINC02008-202ENST00000494340 ZC3H4Q9UPT8 1303 aaKnown RBP12.9□□□□□ -0.34
LINC02008-202ENST00000494340 KIF3CO14782 793 aa12.9□□□□□ -0.34
LINC02008-202ENST00000494340 SBF1O95248 1867 aa12.9□□□□□ -0.34
LINC02008-202ENST00000494340 NEFMP07197 916 aa12.89□□□□□ -0.35
LINC02008-202ENST00000494340 CHRNA5P30532 468 aa12.89□□□□□ -0.35
LINC02008-202ENST00000494340 NPM2Q86SE8 214 aaKnown RBP12.89□□□□□ -0.35
LINC02008-202ENST00000494340 ZNF526Q8TF50 670 aaPredicted RBP12.89□□□□□ -0.35
LINC02008-202ENST00000494340 CARMIL3Q8ND23 1372 aa12.89□□□□□ -0.35
LINC02008-202ENST00000494340 SNRPA1P09661 255 aaKnown RBP12.88□□□□□ -0.35
LINC02008-202ENST00000494340 HSPA6P17066 643 aa12.88□□□□□ -0.35
LINC02008-202ENST00000494340 C9orf131Q5VYM1 1079 aa12.88□□□□□ -0.35
LINC02008-202ENST00000494340 PNNQ9H307 717 aaKnown RBP12.88□□□□□ -0.35
LINC02008-202ENST00000494340 ANKRD31Q8N7Z5 1873 aa12.87□□□□□ -0.35
LINC02008-202ENST00000494340 LAMB4A4D0S4 1761 aa12.87□□□□□ -0.35
LINC02008-202ENST00000494340 H0YIN7 160 aa12.87□□□□□ -0.35
LINC02008-202ENST00000494340 CAMTA2O94983 1202 aa12.87□□□□□ -0.35
LINC02008-202ENST00000494340 TBC1D9BQ66K14 1250 aa12.87□□□□□ -0.35
LINC02008-202ENST00000494340 CLEC4GQ6UXB4 293 aa12.87□□□□□ -0.35
LINC02008-202ENST00000494340 TTLL6Q8N841 843 aa12.87□□□□□ -0.35
LINC02008-202ENST00000494340 PNISRQ8TF01 805 aaKnown RBP12.87□□□□□ -0.35
LINC02008-202ENST00000494340 BRIP1Q9BX63 1249 aa12.87□□□□□ -0.35
LINC02008-202ENST00000494340 DLG5Q8TDM6 1919 aa12.87□□□□□ -0.35
LINC02008-202ENST00000494340 KCNQ3O43525 872 aa12.86□□□□□ -0.35
LINC02008-202ENST00000494340 TOMM70O94826 608 aa12.86□□□□□ -0.35
LINC02008-202ENST00000494340 A1BGP04217 495 aa12.86□□□□□ -0.35
LINC02008-202ENST00000494340 PDE6BP35913 854 aa12.86□□□□□ -0.35
LINC02008-202ENST00000494340 TAF7Q15545 349 aaPredicted RBP12.86□□□□□ -0.35
LINC02008-202ENST00000494340 MCM10Q7L590 875 aa12.86□□□□□ -0.35
LINC02008-202ENST00000494340 C2CD5Q86YS7 1000 aa12.86□□□□□ -0.35
LINC02008-202ENST00000494340 TBC1D2BQ9UPU7 963 aa12.86□□□□□ -0.35
LINC02008-202ENST00000494340 USP16Q9Y5T5 823 aa12.86□□□□□ -0.35
LINC02008-202ENST00000494340 KDM3BQ7LBC6 1761 aa12.86□□□□□ -0.35
LINC02008-202ENST00000494340 TNRC6CQ9HCJ0 1690 aaKnown RBP12.86□□□□□ -0.35
LINC02008-202ENST00000494340 KDM2BQ8NHM5 1336 aa12.86□□□□□ -0.35
LINC02008-202ENST00000494340 CEP350Q5VT06 3117 aa12.85□□□□□ -0.35
LINC02008-202ENST00000494340 PRR5LQ6MZQ0 368 aa12.85□□□□□ -0.35
LINC02008-202ENST00000494340 DZIP3Q86Y13 1208 aaKnown RBP12.85□□□□□ -0.35
LINC02008-202ENST00000494340 PLEKHF1Q96S99 279 aa12.85□□□□□ -0.35
LINC02008-202ENST00000494340 SETDB2Q96T68 719 aa12.85□□□□□ -0.35
LINC02008-202ENST00000494340 RNF181Q9P0P0 153 aa12.85□□□□□ -0.35
LINC02008-202ENST00000494340 ZNF652Q9Y2D9 606 aa12.85□□□□□ -0.35
LINC02008-202ENST00000494340 ARFGEF2Q9Y6D5 1785 aa12.84□□□□□ -0.35
LINC02008-202ENST00000494340 BICDL1Q6ZP65 573 aa12.84□□□□□ -0.35
LINC02008-202ENST00000494340 ZNF330Q9Y3S2 320 aaPredicted RBP12.84□□□□□ -0.35
LINC02008-202ENST00000494340 COL11A2P13942 1736 aaPredicted RBP12.84□□□□□ -0.35
LINC02008-202ENST00000494340 LMNB1P20700 586 aa12.83□□□□□ -0.36
LINC02008-202ENST00000494340 ST5P78524 1137 aa12.83□□□□□ -0.36
LINC02008-202ENST00000494340 RALBP1Q15311 655 aa12.83□□□□□ -0.36
LINC02008-202ENST00000494340 NFE2L2Q16236 605 aa12.83□□□□□ -0.36
LINC02008-202ENST00000494340 CNBD1Q8NA66 436 aa12.83□□□□□ -0.36
LINC02008-202ENST00000494340 RBM46Q8TBY0 533 aaKnown RBP12.83□□□□□ -0.36
LINC02008-202ENST00000494340 FER1L6Q2WGJ9 1857 aa12.82□□□□□ -0.36
LINC02008-202ENST00000494340 DCTN1Q14203 1278 aa12.82□□□□□ -0.36
LINC02008-202ENST00000494340 STYK1Q6J9G0 422 aa12.82□□□□□ -0.36
LINC02008-202ENST00000494340 LTBP3Q9NS15 1303 aa12.82□□□□□ -0.36
LINC02008-202ENST00000494340 DICER1Q9UPY3 1922 aaKnown RBP12.82□□□□□ -0.36
LINC02008-202ENST00000494340 PRAMEF22A3QJZ6 481 aa12.81□□□□□ -0.36
LINC02008-202ENST00000494340 APLP1P51693 650 aa12.81□□□□□ -0.36
LINC02008-202ENST00000494340 FSTL1Q12841 308 aa12.81□□□□□ -0.36
LINC02008-202ENST00000494340 SOGA3Q5TF21 947 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms