RNA–Protein interactions for RNA: ENST00000494300.1

NXF3-206, Transcript of nuclear RNA export factor 3, humanhuman

TSL 3

Gene NXF3, Length 543 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-206ENST00000494300 CSB-PGBD3P0DP91 1061 aa8.11□□□□□ -1.11
NXF3-206ENST00000494300 RXRBP28702 533 aa8.11□□□□□ -1.11
NXF3-206ENST00000494300 CHRNA2Q15822 529 aa8.11□□□□□ -1.11
NXF3-206ENST00000494300 UNC5CLQ8IV45 518 aa8.11□□□□□ -1.11
NXF3-206ENST00000494300 QTRT2Q9H974 415 aaKnown RBP8.11□□□□□ -1.11
NXF3-206ENST00000494300 STRN4Q9NRL3 753 aa8.11□□□□□ -1.11
NXF3-206ENST00000494300 USTQ9Y2C2 406 aa8.11□□□□□ -1.11
NXF3-206ENST00000494300 CPDO75976 1380 aa8.1□□□□□ -1.11
NXF3-206ENST00000494300 NRKQ7Z2Y5 1582 aa8.1□□□□□ -1.11
NXF3-206ENST00000494300 WASHC2AQ641Q2 1341 aa8.1□□□□□ -1.11
NXF3-206ENST00000494300 FYB1O15117 783 aa8.1□□□□□ -1.11
NXF3-206ENST00000494300 MLLT3P42568 568 aaPredicted RBP8.1□□□□□ -1.11
NXF3-206ENST00000494300 AMPHP49418 695 aa8.1□□□□□ -1.11
NXF3-206ENST00000494300 PDIA6Q15084 440 aa8.1□□□□□ -1.11
NXF3-206ENST00000494300 DRC1Q96MC2 740 aa8.1□□□□□ -1.11
NXF3-206ENST00000494300 PCMTD1Q96MG8 357 aaPredicted RBP8.1□□□□□ -1.11
NXF3-206ENST00000494300 CARD14Q9BXL6 1004 aa8.1□□□□□ -1.11
NXF3-206ENST00000494300 COG6Q9Y2V7 657 aa8.1□□□□□ -1.11
NXF3-206ENST00000494300 PIK3C2AO00443 1686 aa8.1□□□□□ -1.11
NXF3-206ENST00000494300 NSD2O96028 1365 aa8.1□□□□□ -1.11
NXF3-206ENST00000494300 MYOM1P52179 1685 aa8.09□□□□□ -1.11
NXF3-206ENST00000494300 SPDYE16A6NNV3 312 aaPredicted RBP8.09□□□□□ -1.11
NXF3-206ENST00000494300 RBM6P78332 1123 aaKnown RBP8.09□□□□□ -1.11
NXF3-206ENST00000494300 CNGB1Q14028 1251 aaPredicted RBP8.09□□□□□ -1.11
NXF3-206ENST00000494300 MORC1Q86VD1 984 aa8.09□□□□□ -1.11
NXF3-206ENST00000494300 IVNS1ABPQ9Y6Y0 642 aa8.09□□□□□ -1.11
NXF3-206ENST00000494300 PHRF1Q9P1Y6 1649 aaKnown RBP8.09□□□□□ -1.11
NXF3-206ENST00000494300 COL14A1Q05707 1796 aaKnown RBP8.09□□□□□ -1.11
NXF3-206ENST00000494300 AATKQ6ZMQ8 1374 aa8.09□□□□□ -1.12
NXF3-206ENST00000494300 SLIT3O75094 1523 aa8.08□□□□□ -1.12
NXF3-206ENST00000494300 NCLP19338 710 aaKnown RBP8.08□□□□□ -1.12
NXF3-206ENST00000494300 TNNT2P45379 298 aaPredicted RBP8.08□□□□□ -1.12
NXF3-206ENST00000494300 FOSBP53539 338 aa8.08□□□□□ -1.12
NXF3-206ENST00000494300 VPS72Q15906 364 aa8.08□□□□□ -1.12
NXF3-206ENST00000494300 ARHGEF25Q86VW2 580 aa8.08□□□□□ -1.12
NXF3-206ENST00000494300 OVOS2A0A0J9YW53 1432 aa8.08□□□□□ -1.12
NXF3-206ENST00000494300 OVOS2Q6IE36 1432 aa8.08□□□□□ -1.12
NXF3-206ENST00000494300 SMG6Q86US8 1419 aaKnown RBP8.08□□□□□ -1.12
NXF3-206ENST00000494300 ABCA3Q99758 1704 aa8.08□□□□□ -1.12
NXF3-206ENST00000494300 MARF1Q9Y4F3 1742 aaKnown RBP8.07□□□□□ -1.12
NXF3-206ENST00000494300 POTEAQ6S8J7 498 aa8.07□□□□□ -1.12
NXF3-206ENST00000494300 TOM1L2Q6ZVM7 507 aa8.07□□□□□ -1.12
NXF3-206ENST00000494300 DDX12PQ92771 950 aa8.07□□□□□ -1.12
NXF3-206ENST00000494300 GJD4Q96KN9 370 aaPredicted RBP8.07□□□□□ -1.12
NXF3-206ENST00000494300 KRTAP3-3Q9BYR6 98 aa8.07□□□□□ -1.12
NXF3-206ENST00000494300 KRTAP3-2Q9BYR7 98 aa8.07□□□□□ -1.12
NXF3-206ENST00000494300 AXIN2Q9Y2T1 843 aa8.07□□□□□ -1.12
NXF3-206ENST00000494300 SLIT2O94813 1529 aa8.07□□□□□ -1.12
NXF3-206ENST00000494300 ATRNO75882 1429 aa8.06□□□□□ -1.12
NXF3-206ENST00000494300 PBX2P40425 430 aa8.06□□□□□ -1.12
NXF3-206ENST00000494300 IRX6P78412 446 aaPredicted RBP8.06□□□□□ -1.12
NXF3-206ENST00000494300 CC2D1BQ5T0F9 858 aaKnown RBP8.06□□□□□ -1.12
NXF3-206ENST00000494300 SREK1Q8WXA9 508 aaKnown RBP8.06□□□□□ -1.12
NXF3-206ENST00000494300 ZDHHC16Q969W1 377 aa8.06□□□□□ -1.12
NXF3-206ENST00000494300 LTV1Q96GA3 475 aaPredicted RBP8.06□□□□□ -1.12
NXF3-206ENST00000494300 NLRP2Q9NX02 1062 aa8.06□□□□□ -1.12
NXF3-206ENST00000494300 RGS17Q9UGC6 210 aaPredicted RBP8.06□□□□□ -1.12
NXF3-206ENST00000494300 ZNF330Q9Y3S2 320 aaPredicted RBP8.06□□□□□ -1.12
NXF3-206ENST00000494300 RTL1A6NKG5 1358 aa8.06□□□□□ -1.12
NXF3-206ENST00000494300 BCL9LQ86UU0 1499 aa8.06□□□□□ -1.12
NXF3-206ENST00000494300 KIF20BQ96Q89 1820 aa8.06□□□□□ -1.12
NXF3-206ENST00000494300 MAP3K19Q56UN5 1328 aa8.05□□□□□ -1.12
NXF3-206ENST00000494300 PLCH1Q4KWH8 1693 aa8.05□□□□□ -1.12
NXF3-206ENST00000494300 BLMP54132 1417 aaPredicted RBP8.05□□□□□ -1.12
NXF3-206ENST00000494300 PHF14O94880 888 aa8.05□□□□□ -1.12
NXF3-206ENST00000494300 RRS1Q15050 365 aaKnown RBP8.05□□□□□ -1.12
NXF3-206ENST00000494300 ANKRD24Q8TF21 1146 aa8.05□□□□□ -1.12
NXF3-206ENST00000494300 IP6K1Q92551 441 aa8.05□□□□□ -1.12
NXF3-206ENST00000494300 MRRFQ96E11 262 aaKnown RBP8.05□□□□□ -1.12
NXF3-206ENST00000494300 PCDHGA10Q9Y5H3 936 aa8.05□□□□□ -1.12
NXF3-206ENST00000494300 NWD2Q9ULI1 1742 aa8.05□□□□□ -1.12
NXF3-206ENST00000494300 CRYBG1Q9Y4K1 1723 aa8.05□□□□□ -1.12
NXF3-206ENST00000494300 SPATA31A5Q5VU36 1347 aa8.04□□□□□ -1.12
NXF3-206ENST00000494300 SPATA31A7Q8IWB4 1347 aa8.04□□□□□ -1.12
NXF3-206ENST00000494300 WDR17Q8IZU2 1322 aa8.04□□□□□ -1.12
NXF3-206ENST00000494300 NFAT5O94916 1531 aa8.04□□□□□ -1.12
NXF3-206ENST00000494300 ABCC6O95255 1503 aa8.04□□□□□ -1.12
NXF3-206ENST00000494300 LOC102724159A0A0B4J2E5 919 aa8.04□□□□□ -1.12
NXF3-206ENST00000494300 ARHGAP33O14559 1287 aa8.04□□□□□ -1.12
NXF3-206ENST00000494300 HOXC9P31274 260 aa8.04□□□□□ -1.12
NXF3-206ENST00000494300 PTGER2P43116 358 aa8.04□□□□□ -1.12
NXF3-206ENST00000494300 DDX10Q13206 875 aaKnown RBP8.04□□□□□ -1.12
NXF3-206ENST00000494300 PWP2Q15269 919 aaKnown RBP8.04□□□□□ -1.12
NXF3-206ENST00000494300 FAM98CQ17RN3 349 aaKnown RBP8.04□□□□□ -1.12
NXF3-206ENST00000494300 TYW1BQ6NUM6 668 aa8.04□□□□□ -1.12
NXF3-206ENST00000494300 LARP1Q6PKG0 1096 aaKnown RBP8.04□□□□□ -1.12
NXF3-206ENST00000494300 POTEEQ6S8J3 1075 aa8.04□□□□□ -1.12
NXF3-206ENST00000494300 TCP11L2Q8N4U5 519 aa8.04□□□□□ -1.12
NXF3-206ENST00000494300 CCDC102AQ96A19 550 aa8.04□□□□□ -1.12
NXF3-206ENST00000494300 KCNK17Q96T54 332 aa8.04□□□□□ -1.12
NXF3-206ENST00000494300 THRAP3Q9Y2W1 955 aaKnown RBP8.04□□□□□ -1.12
NXF3-206ENST00000494300 FLT4P35916 1363 aa8.04□□□□□ -1.12
NXF3-206ENST00000494300 KIF24Q5T7B8 1368 aa8.04□□□□□ -1.12
NXF3-206ENST00000494300 COL5A2P05997 1499 aaPredicted RBP8.04□□□□□ -1.12
NXF3-206ENST00000494300 USP54Q70EL1 1684 aa8.04□□□□□ -1.12
NXF3-206ENST00000494300 CRB1P82279 1406 aa8.03□□□□□ -1.12
NXF3-206ENST00000494300 CDK12Q9NYV4 1490 aaPredicted RBP8.03□□□□□ -1.12
NXF3-206ENST00000494300 GRXCR2A6NFK2 248 aa8.03□□□□□ -1.12
NXF3-206ENST00000494300 PSEN2P49810 448 aa8.03□□□□□ -1.12
NXF3-206ENST00000494300 SH3D19Q5HYK7 790 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms