RNA–Protein interactions for RNA: ENST00000494062.2

SPART-209, Transcript of spartin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPART, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPART-209ENST00000494062 NPHP3Q7Z494 1330 aa22.58■■□□□ 1.21
SPART-209ENST00000494062 SSH3Q8TE77 659 aa22.57■■□□□ 1.2
SPART-209ENST00000494062 SIL1Q9H173 461 aa22.57■■□□□ 1.2
SPART-209ENST00000494062 REC8O95072 547 aa22.57■■□□□ 1.2
SPART-209ENST00000494062 PHKG2P15735 406 aa22.57■■□□□ 1.2
SPART-209ENST00000494062 TNPO1Q92973 898 aaKnown RBP22.56■■□□□ 1.2
SPART-209ENST00000494062 DNAJC5Q9H3Z4 198 aa22.56■■□□□ 1.2
SPART-209ENST00000494062 PRDM11Q9NQV5 511 aa22.56■■□□□ 1.2
SPART-209ENST00000494062 STRN4Q9NRL3 753 aa22.56■■□□□ 1.2
SPART-209ENST00000494062 FOXD4L5Q5VV16 416 aaPredicted RBP22.55■■□□□ 1.2
SPART-209ENST00000494062 KLHDC4Q8TBB5 520 aa22.55■■□□□ 1.2
SPART-209ENST00000494062 FOXD4L4Q8WXT5 416 aaPredicted RBP22.55■■□□□ 1.2
SPART-209ENST00000494062 IL25Q9H293 177 aa22.55■■□□□ 1.2
SPART-209ENST00000494062 SPG7Q9UQ90 795 aa22.55■■□□□ 1.2
SPART-209ENST00000494062 USP16Q9Y5T5 823 aa22.55■■□□□ 1.2
SPART-209ENST00000494062 RGPD5Q99666 1765 aa22.55■■□□□ 1.2
SPART-209ENST00000494062 CYP27B1O15528 508 aa22.55■■□□□ 1.2
SPART-209ENST00000494062 HOXB7P09629 217 aa22.55■■□□□ 1.2
SPART-209ENST00000494062 KSR2Q6VAB6 950 aa22.55■■□□□ 1.2
SPART-209ENST00000494062 SLC52A2Q9HAB3 445 aa22.55■■□□□ 1.2
SPART-209ENST00000494062 SSFA2P28290 1259 aa22.54■■□□□ 1.2
SPART-209ENST00000494062 RABEP1Q15276 862 aa22.54■■□□□ 1.2
SPART-209ENST00000494062 TTC5Q8N0Z6 440 aa22.54■■□□□ 1.2
SPART-209ENST00000494062 XAGE3Q8WTP9 111 aa22.54■■□□□ 1.2
SPART-209ENST00000494062 SLIT3O75094 1523 aa22.54■■□□□ 1.2
SPART-209ENST00000494062 TOM1L2Q6ZVM7 507 aa22.54■■□□□ 1.2
SPART-209ENST00000494062 MED1Q15648 1581 aaPredicted RBP22.53■■□□□ 1.2
SPART-209ENST00000494062 COPS6Q7L5N1 327 aa22.53■■□□□ 1.2
SPART-209ENST00000494062 OSBPL3Q9H4L5 887 aa22.53■■□□□ 1.2
SPART-209ENST00000494062 PALD1Q9ULE6 856 aa22.53■■□□□ 1.2
SPART-209ENST00000494062 USP54Q70EL1 1684 aa22.53■■□□□ 1.2
SPART-209ENST00000494062 IFNL2Q8IZJ0 200 aa22.53■■□□□ 1.2
SPART-209ENST00000494062 ESYT1Q9BSJ8 1104 aa22.53■■□□□ 1.2
SPART-209ENST00000494062 MEGF6O75095 1541 aa22.53■■□□□ 1.2
SPART-209ENST00000494062 SALL3Q9BXA9 1300 aa22.53■■□□□ 1.2
SPART-209ENST00000494062 DDX54Q8TDD1 881 aaKnown RBP22.52■■□□□ 1.2
SPART-209ENST00000494062 CHMLP26374 656 aa22.52■■□□□ 1.2
SPART-209ENST00000494062 NEK4P51957 841 aa22.52■■□□□ 1.2
SPART-209ENST00000494062 BRINP3Q76B58 766 aa22.52■■□□□ 1.2
SPART-209ENST00000494062 SUCLG2Q96I99 432 aa22.52■■□□□ 1.19
SPART-209ENST00000494062 MYD88Q99836 296 aa22.52■■□□□ 1.19
SPART-209ENST00000494062 UPF3BQ9BZI7 483 aaKnown RBP22.52■■□□□ 1.19
SPART-209ENST00000494062 ZNF335Q9H4Z2 1342 aaPredicted RBP22.51■■□□□ 1.19
SPART-209ENST00000494062 TRAK2O60296 914 aa22.51■■□□□ 1.19
SPART-209ENST00000494062 ZGPATQ8N5A5 531 aaKnown RBP22.51■■□□□ 1.19
SPART-209ENST00000494062 ATP5J2-PTCD1G3V325 749 aa22.51■■□□□ 1.19
SPART-209ENST00000494062 PTCD1O75127 700 aaKnown RBP22.51■■□□□ 1.19
SPART-209ENST00000494062 CABP4P57796 275 aa22.51■■□□□ 1.19
SPART-209ENST00000494062 PKP1Q13835 747 aa22.5■■□□□ 1.19
SPART-209ENST00000494062 POLA2Q14181 598 aa22.5■■□□□ 1.19
SPART-209ENST00000494062 PDIA6Q15084 440 aa22.5■■□□□ 1.19
SPART-209ENST00000494062 KIF1BPQ96EK5 621 aa22.5■■□□□ 1.19
SPART-209ENST00000494062 DDX21Q9NR30 783 aaKnown RBP eCLIP22.5■■□□□ 1.19
SPART-209ENST00000494062 HYPKQ9NX55 129 aa22.5■■□□□ 1.19
SPART-209ENST00000494062 BICC1Q9H694 974 aaKnown RBP22.5■■□□□ 1.19
SPART-209ENST00000494062 KDM6AO15550 1401 aaPredicted RBP22.5■■□□□ 1.19
SPART-209ENST00000494062 ZNF330Q9Y3S2 320 aaPredicted RBP22.49■■□□□ 1.19
SPART-209ENST00000494062 CCDC9Q9Y3X0 531 aaKnown RBP22.49■■□□□ 1.19
SPART-209ENST00000494062 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.49■■□□□ 1.19
SPART-209ENST00000494062 SPATA31A3Q5VYP0 1347 aa22.49■■□□□ 1.19
SPART-209ENST00000494062 DDX58O95786 925 aaKnown RBP22.49■■□□□ 1.19
SPART-209ENST00000494062 CHAMP1Q96JM3 812 aa22.48■■□□□ 1.19
SPART-209ENST00000494062 GRM8O00222 908 aa22.48■■□□□ 1.19
SPART-209ENST00000494062 ST18O60284 1047 aa22.48■■□□□ 1.19
SPART-209ENST00000494062 CWC27Q6UX04 472 aaKnown RBP22.48■■□□□ 1.19
SPART-209ENST00000494062 LARP6Q9BRS8 491 aaKnown RBP22.48■■□□□ 1.19
SPART-209ENST00000494062 TRPM3Q9HCF6 1732 aaPredicted RBP22.47■■□□□ 1.19
SPART-209ENST00000494062 DDIT3P35638 169 aa22.47■■□□□ 1.19
SPART-209ENST00000494062 CHMP4AQ9BY43 222 aa22.47■■□□□ 1.19
SPART-209ENST00000494062 CCDC8Q9H0W5 538 aaPredicted RBP22.47■■□□□ 1.19
SPART-209ENST00000494062 DTNBO60941 627 aa22.47■■□□□ 1.19
SPART-209ENST00000494062 IGKV5-2P06315 115 aa22.47■■□□□ 1.19
SPART-209ENST00000494062 RAB11FIP3O75154 756 aa22.46■■□□□ 1.19
SPART-209ENST00000494062 AACSQ86V21 672 aa22.46■■□□□ 1.19
SPART-209ENST00000494062 CLASRPQ8N2M8 674 aaKnown RBP22.45■■□□□ 1.18
SPART-209ENST00000494062 LINS1Q8NG48 757 aa22.45■■□□□ 1.18
SPART-209ENST00000494062 PI4K2BQ8TCG2 481 aa22.45■■□□□ 1.18
SPART-209ENST00000494062 TNS3Q68CZ2 1445 aa22.45■■□□□ 1.18
SPART-209ENST00000494062 STRCP1A6NGW2 1772 aa22.45■■□□□ 1.18
SPART-209ENST00000494062 NEXNQ0ZGT2 675 aa22.45■■□□□ 1.18
SPART-209ENST00000494062 KAZALD1Q96I82 304 aa22.45■■□□□ 1.18
SPART-209ENST00000494062 STAP2Q9UGK3 403 aa22.45■■□□□ 1.18
SPART-209ENST00000494062 PXDNLA1KZ92 1463 aa22.45■■□□□ 1.18
SPART-209ENST00000494062 NCAPD2Q15021 1401 aa22.45■■□□□ 1.18
SPART-209ENST00000494062 IFIT2P09913 472 aaKnown RBP22.44■■□□□ 1.18
SPART-209ENST00000494062 RAB3GAP1Q15042 981 aa22.44■■□□□ 1.18
SPART-209ENST00000494062 NCOA3Q9Y6Q9 1424 aa22.44■■□□□ 1.18
SPART-209ENST00000494062 SLAIN2Q9P270 581 aa22.44■■□□□ 1.18
SPART-209ENST00000494062 FOXD4L6Q3SYB3 417 aaPredicted RBP22.44■■□□□ 1.18
SPART-209ENST00000494062 EPHA10Q5JZY3 1008 aa22.44■■□□□ 1.18
SPART-209ENST00000494062 FOXD4L3Q6VB84 417 aaPredicted RBP22.44■■□□□ 1.18
SPART-209ENST00000494062 DCAF5Q96JK2 942 aa22.44■■□□□ 1.18
SPART-209ENST00000494062 LMO7Q8WWI1 1683 aa22.43■■□□□ 1.18
SPART-209ENST00000494062 ALDH1L1O75891 902 aa22.43■■□□□ 1.18
SPART-209ENST00000494062 CHMP3Q9Y3E7 222 aa22.43■■□□□ 1.18
SPART-209ENST00000494062 KDM3BQ7LBC6 1761 aa22.43■■□□□ 1.18
SPART-209ENST00000494062 SNRPA1P09661 255 aaKnown RBP22.42■■□□□ 1.18
SPART-209ENST00000494062 UBE3BQ7Z3V4 1068 aa22.42■■□□□ 1.18
SPART-209ENST00000494062 EVA1CP58658 441 aa22.42■■□□□ 1.18
SPART-209ENST00000494062 ANKRD13DQ6ZTN6 518 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms