RNA–Protein interactions for RNA: ENST00000493699.1

HLA-E-203, Transcript of major histocompatibility complex, class I, E, humanhuman

Gene HLA-E, Length 907 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-E-203ENST00000493699 HTATSF1O43719 755 aaKnown RBP29.34■■■□□ 2.29
HLA-E-203ENST00000493699 ZPR1O75312 459 aa29.34■■■□□ 2.29
HLA-E-203ENST00000493699 DDR1Q08345 913 aa29.34■■■□□ 2.29
HLA-E-203ENST00000493699 MCM10Q7L590 875 aa29.34■■■□□ 2.29
HLA-E-203ENST00000493699 TEX13AQ9BXU3 409 aaPredicted RBP29.34■■■□□ 2.29
HLA-E-203ENST00000493699 NARFQ9UHQ1 456 aa29.34■■■□□ 2.29
HLA-E-203ENST00000493699 COL15A1P39059 1388 aa29.34■■■□□ 2.29
HLA-E-203ENST00000493699 RTF1Q92541 710 aaKnown RBP29.33■■■□□ 2.29
HLA-E-203ENST00000493699 FMNL2Q96PY5 1086 aa29.33■■■□□ 2.29
HLA-E-203ENST00000493699 WWC3Q9ULE0 1092 aa29.33■■■□□ 2.29
HLA-E-203ENST00000493699 KIAA1551Q9HCM1 1747 aa29.33■■■□□ 2.29
HLA-E-203ENST00000493699 EIF5P55010 431 aaKnown RBP29.32■■■□□ 2.28
HLA-E-203ENST00000493699 A0A0G2JLW4 131 aa29.31■■■□□ 2.28
HLA-E-203ENST00000493699 CANXP27824 592 aaKnown RBP29.31■■■□□ 2.28
HLA-E-203ENST00000493699 DDX10Q13206 875 aaKnown RBP29.31■■■□□ 2.28
HLA-E-203ENST00000493699 PLEKHF1Q96S99 279 aa29.31■■■□□ 2.28
HLA-E-203ENST00000493699 POLRMTO00411 1230 aaKnown RBP29.3■■■□□ 2.28
HLA-E-203ENST00000493699 DCTN1Q14203 1278 aa29.3■■■□□ 2.28
HLA-E-203ENST00000493699 RALBP1Q15311 655 aa29.3■■■□□ 2.28
HLA-E-203ENST00000493699 BCL2L12Q9HB09 334 aa29.3■■■□□ 2.28
HLA-E-203ENST00000493699 DPEP1P16444 411 aa29.28■■■□□ 2.28
HLA-E-203ENST00000493699 N4BP2Q86UW6 1770 aaPredicted RBP29.27■■■□□ 2.28
HLA-E-203ENST00000493699 KCNA3P22001 575 aa29.27■■■□□ 2.28
HLA-E-203ENST00000493699 NFIXQ14938 502 aa29.26■■■□□ 2.27
HLA-E-203ENST00000493699 A1BGP04217 495 aa29.24■■■□□ 2.27
HLA-E-203ENST00000493699 IL6STP40189 918 aaPredicted RBP29.24■■■□□ 2.27
HLA-E-203ENST00000493699 USP16Q9Y5T5 823 aa29.24■■■□□ 2.27
HLA-E-203ENST00000493699 A0A087WZG4 1122 aa29.23■■■□□ 2.27
HLA-E-203ENST00000493699 NEFMP07197 916 aa29.23■■■□□ 2.27
HLA-E-203ENST00000493699 TAF7Q15545 349 aaPredicted RBP29.23■■■□□ 2.27
HLA-E-203ENST00000493699 BCS1LQ9Y276 419 aa29.22■■■□□ 2.27
HLA-E-203ENST00000493699 PRAMEF22A3QJZ6 481 aa29.21■■■□□ 2.27
HLA-E-203ENST00000493699 PNNQ9H307 717 aaKnown RBP29.21■■■□□ 2.27
HLA-E-203ENST00000493699 SNRPA1P09661 255 aaKnown RBP29.2■■■□□ 2.26
HLA-E-203ENST00000493699 NFE2L2Q16236 605 aa29.2■■■□□ 2.26
HLA-E-203ENST00000493699 BRCA1P38398 1863 aaKnown RBP29.19■■■□□ 2.26
HLA-E-203ENST00000493699 DLG5Q8TDM6 1919 aa29.18■■■□□ 2.26
HLA-E-203ENST00000493699 ADCY9O60503 1353 aa29.18■■■□□ 2.26
HLA-E-203ENST00000493699 TBC1D2BQ9UPU7 963 aa29.18■■■□□ 2.26
HLA-E-203ENST00000493699 NRXN2Q9P2S2 1712 aa29.17■■■□□ 2.26
HLA-E-203ENST00000493699 SERPINB2P05120 415 aa29.17■■■□□ 2.26
HLA-E-203ENST00000493699 MIS18AQ9NYP9 233 aa29.17■■■□□ 2.26
HLA-E-203ENST00000493699 PIM2Q9P1W9 311 aa29.17■■■□□ 2.26
HLA-E-203ENST00000493699 AFDNP55196 1824 aaKnown RBP29.16■■■□□ 2.26
HLA-E-203ENST00000493699 ZNF330Q9Y3S2 320 aaPredicted RBP29.16■■■□□ 2.26
HLA-E-203ENST00000493699 MYBBP1AQ9BQG0 1328 aaKnown RBP29.16■■■□□ 2.26
HLA-E-203ENST00000493699 CHRNA5P30532 468 aa29.15■■■□□ 2.26
HLA-E-203ENST00000493699 TBC1D9BQ66K14 1250 aa29.15■■■□□ 2.26
HLA-E-203ENST00000493699 ATP10DQ9P241 1426 aa29.14■■■□□ 2.26
HLA-E-203ENST00000493699 MAPK8IP3Q9UPT6 1336 aa29.14■■■□□ 2.25
HLA-E-203ENST00000493699 CAMTA2O94983 1202 aa29.13■■■□□ 2.25
HLA-E-203ENST00000493699 PIP4K2AP48426 406 aaPredicted RBP29.13■■■□□ 2.25
HLA-E-203ENST00000493699 BICDL1Q6ZP65 573 aa29.13■■■□□ 2.25
HLA-E-203ENST00000493699 PNISRQ8TF01 805 aaKnown RBP29.12■■■□□ 2.25
HLA-E-203ENST00000493699 THUMPD2Q9BTF0 503 aaKnown RBP29.12■■■□□ 2.25
HLA-E-203ENST00000493699 DALRD3Q5D0E6 543 aaKnown RBP29.11■■■□□ 2.25
HLA-E-203ENST00000493699 NPM2Q86SE8 214 aaKnown RBP29.11■■■□□ 2.25
HLA-E-203ENST00000493699 SCN7AQ01118 1682 aa29.11■■■□□ 2.25
HLA-E-203ENST00000493699 NBPF26B4DH59 902 aa29.1■■■□□ 2.25
HLA-E-203ENST00000493699 NBPF10Q6P3W6 841 aaKnown RBP29.1■■■□□ 2.25
HLA-E-203ENST00000493699 ARHGAP27Q6ZUM4 889 aa29.1■■■□□ 2.25
HLA-E-203ENST00000493699 DZIP3Q86Y13 1208 aaKnown RBP29.1■■■□□ 2.25
HLA-E-203ENST00000493699 NBPF15Q8N660 670 aa29.1■■■□□ 2.25
HLA-E-203ENST00000493699 C1QTNF8P60827 252 aa29.09■■■□□ 2.25
HLA-E-203ENST00000493699 ARFGEF1Q9Y6D6 1849 aa29.08■■■□□ 2.25
HLA-E-203ENST00000493699 GIGYF1O75420 1035 aaPredicted RBP29.08■■■□□ 2.25
HLA-E-203ENST00000493699 EIF4A1P60842 406 aaKnown RBP29.07■■■□□ 2.24
HLA-E-203ENST00000493699 KDM3BQ7LBC6 1761 aa29.07■■■□□ 2.24
HLA-E-203ENST00000493699 CARMIL3Q8ND23 1372 aa29.07■■■□□ 2.24
HLA-E-203ENST00000493699 RIPK4P57078 832 aa29.06■■■□□ 2.24
HLA-E-203ENST00000493699 PRKRIP1Q9H875 184 aaPredicted RBP29.06■■■□□ 2.24
HLA-E-203ENST00000493699 TMPOP42166 694 aaKnown RBP29.05■■■□□ 2.24
HLA-E-203ENST00000493699 CLEC4GQ6UXB4 293 aa29.05■■■□□ 2.24
HLA-E-203ENST00000493699 SETDB2Q96T68 719 aa29.05■■■□□ 2.24
HLA-E-203ENST00000493699 PRR5LQ6MZQ0 368 aa29.04■■■□□ 2.24
HLA-E-203ENST00000493699 GPBP1L1Q9HC44 474 aaPredicted RBP29.04■■■□□ 2.24
HLA-E-203ENST00000493699 BCORQ6W2J9 1755 aa29.03■■■□□ 2.24
HLA-E-203ENST00000493699 C2CD5Q86YS7 1000 aa29.02■■■□□ 2.24
HLA-E-203ENST00000493699 BRIP1Q9BX63 1249 aa29.02■■■□□ 2.24
HLA-E-203ENST00000493699 RGL2O15211 777 aa29.01■■■□□ 2.23
HLA-E-203ENST00000493699 H0YIN7 160 aa29■■■□□ 2.23
HLA-E-203ENST00000493699 ZNF526Q8TF50 670 aaPredicted RBP29■■■□□ 2.23
HLA-E-203ENST00000493699 DLEC1Q9Y238 1755 aa28.99■■■□□ 2.23
HLA-E-203ENST00000493699 CCDC146Q8IYE0 955 aa28.99■■■□□ 2.23
HLA-E-203ENST00000493699 CCDC24Q8N4L8 307 aa28.99■■■□□ 2.23
HLA-E-203ENST00000493699 TTLL6Q8N841 843 aa28.99■■■□□ 2.23
HLA-E-203ENST00000493699 ADAMTS8Q9UP79 889 aa28.99■■■□□ 2.23
HLA-E-203ENST00000493699 LAMB4A4D0S4 1761 aa28.98■■■□□ 2.23
HLA-E-203ENST00000493699 ANKRD31Q8N7Z5 1873 aa28.98■■■□□ 2.23
HLA-E-203ENST00000493699 PDE6BP35913 854 aa28.98■■■□□ 2.23
HLA-E-203ENST00000493699 BABAM1Q9NWV8 329 aa28.98■■■□□ 2.23
HLA-E-203ENST00000493699 PDZRN3Q9UPQ7 1066 aa28.98■■■□□ 2.23
HLA-E-203ENST00000493699 ZNF652Q9Y2D9 606 aa28.98■■■□□ 2.23
HLA-E-203ENST00000493699 LMOD3Q0VAK6 560 aa28.97■■■□□ 2.23
HLA-E-203ENST00000493699 CNBD1Q8NA66 436 aa28.97■■■□□ 2.23
HLA-E-203ENST00000493699 RUNDC1Q96C34 613 aa28.97■■■□□ 2.23
HLA-E-203ENST00000493699 TSPYL4Q9UJ04 414 aa28.97■■■□□ 2.23
HLA-E-203ENST00000493699 WDR43Q15061 677 aaKnown RBP eCLIP28.96■■■□□ 2.23
HLA-E-203ENST00000493699 C9orf131Q5VYM1 1079 aa28.96■■■□□ 2.23
HLA-E-203ENST00000493699 RRP7AQ9Y3A4 280 aaKnown RBP28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms