RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 DDX58O95786 925 aaKnown RBP13.35□□□□□ -0.27
PHACTR4-204ENST00000493669 PNMA6EA0A0J9YXQ4 647 aa13.34□□□□□ -0.27
PHACTR4-204ENST00000493669 RAB11FIP3O75154 756 aa13.34□□□□□ -0.27
PHACTR4-204ENST00000493669 POLA2Q14181 598 aa13.34□□□□□ -0.27
PHACTR4-204ENST00000493669 TBC1D2Q9BYX2 928 aa13.34□□□□□ -0.27
PHACTR4-204ENST00000493669 CYP27B1O15528 508 aa13.34□□□□□ -0.27
PHACTR4-204ENST00000493669 CASC1Q6TDU7 716 aa13.34□□□□□ -0.27
PHACTR4-204ENST00000493669 C16orf71Q8IYS4 520 aaPredicted RBP13.34□□□□□ -0.27
PHACTR4-204ENST00000493669 SMARCA5O60264 1052 aaPredicted RBP13.33□□□□□ -0.27
PHACTR4-204ENST00000493669 SALL3Q9BXA9 1300 aa13.33□□□□□ -0.27
PHACTR4-204ENST00000493669 C5P01031 1676 aa13.33□□□□□ -0.28
PHACTR4-204ENST00000493669 AOX1Q06278 1338 aa13.33□□□□□ -0.28
PHACTR4-204ENST00000493669 PCDH11XQ9BZA7 1347 aa13.33□□□□□ -0.28
PHACTR4-204ENST00000493669 PCDH11YQ9BZA8 1340 aa13.33□□□□□ -0.28
PHACTR4-204ENST00000493669 SNX21Q969T3 373 aa13.33□□□□□ -0.28
PHACTR4-204ENST00000493669 EXOC6BQ9Y2D4 811 aa13.33□□□□□ -0.28
PHACTR4-204ENST00000493669 PDE1AP54750 535 aa13.32□□□□□ -0.28
PHACTR4-204ENST00000493669 MTX1Q13505 466 aa13.32□□□□□ -0.28
PHACTR4-204ENST00000493669 NFATC2IPQ8NCF5 419 aa13.32□□□□□ -0.28
PHACTR4-204ENST00000493669 OTUD7AQ8TE49 926 aaPredicted RBP13.32□□□□□ -0.28
PHACTR4-204ENST00000493669 HSP90AB4PQ58FF6 505 aa13.32□□□□□ -0.28
PHACTR4-204ENST00000493669 TTC5Q8N0Z6 440 aa13.32□□□□□ -0.28
PHACTR4-204ENST00000493669 CARD10Q9BWT7 1032 aa13.32□□□□□ -0.28
PHACTR4-204ENST00000493669 MAP3K2Q9Y2U5 619 aa13.32□□□□□ -0.28
PHACTR4-204ENST00000493669 SNRPA1P09661 255 aaKnown RBP13.31□□□□□ -0.28
PHACTR4-204ENST00000493669 PDIA6Q15084 440 aa13.31□□□□□ -0.28
PHACTR4-204ENST00000493669 LINS1Q8NG48 757 aa13.31□□□□□ -0.28
PHACTR4-204ENST00000493669 STAP2Q9UGK3 403 aa13.31□□□□□ -0.28
PHACTR4-204ENST00000493669 LAMB4A4D0S4 1761 aa13.31□□□□□ -0.28
PHACTR4-204ENST00000493669 APBB1O00213 710 aa13.31□□□□□ -0.28
PHACTR4-204ENST00000493669 ANXA1P04083 346 aa13.31□□□□□ -0.28
PHACTR4-204ENST00000493669 SDSP20132 328 aa13.31□□□□□ -0.28
PHACTR4-204ENST00000493669 PROSER3Q2NL68 480 aa13.31□□□□□ -0.28
PHACTR4-204ENST00000493669 PPP1R42Q7Z4L9 355 aa13.31□□□□□ -0.28
PHACTR4-204ENST00000493669 FMNL2Q96PY5 1086 aa13.31□□□□□ -0.28
PHACTR4-204ENST00000493669 UTYO14607 1347 aa13.31□□□□□ -0.28
PHACTR4-204ENST00000493669 TOM1L2Q6ZVM7 507 aa13.31□□□□□ -0.28
PHACTR4-204ENST00000493669 NBPF7P0C2Y1 421 aaPredicted RBP13.3□□□□□ -0.28
PHACTR4-204ENST00000493669 CABP4P57796 275 aa13.3□□□□□ -0.28
PHACTR4-204ENST00000493669 HSCBQ8IWL3 235 aa13.3□□□□□ -0.28
PHACTR4-204ENST00000493669 ZCRB1Q8TBF4 217 aaKnown RBP13.3□□□□□ -0.28
PHACTR4-204ENST00000493669 TUBGCP6Q96RT7 1819 aa13.3□□□□□ -0.28
PHACTR4-204ENST00000493669 MX1P20591 662 aa13.3□□□□□ -0.28
PHACTR4-204ENST00000493669 SLC39A6Q13433 755 aa13.3□□□□□ -0.28
PHACTR4-204ENST00000493669 NKX1-1Q15270 411 aaPredicted RBP13.3□□□□□ -0.28
PHACTR4-204ENST00000493669 ERBB4Q15303 1308 aa13.29□□□□□ -0.28
PHACTR4-204ENST00000493669 PRAMEF22A3QJZ6 481 aa13.29□□□□□ -0.28
PHACTR4-204ENST00000493669 ERVV-2B6SEH9 535 aa13.29□□□□□ -0.28
PHACTR4-204ENST00000493669 ZNF496Q96IT1 587 aaPredicted RBP13.29□□□□□ -0.28
PHACTR4-204ENST00000493669 LARP1Q6PKG0 1096 aaKnown RBP13.29□□□□□ -0.28
PHACTR4-204ENST00000493669 ANTXR1Q9H6X2 564 aa13.29□□□□□ -0.28
PHACTR4-204ENST00000493669 GLI3P10071 1580 aa13.29□□□□□ -0.28
PHACTR4-204ENST00000493669 SRGAP3O43295 1099 aa13.28□□□□□ -0.28
PHACTR4-204ENST00000493669 IL2RBP14784 551 aa13.28□□□□□ -0.28
PHACTR4-204ENST00000493669 NFKBIBQ15653 356 aa13.28□□□□□ -0.28
PHACTR4-204ENST00000493669 KIF1BPQ96EK5 621 aa13.28□□□□□ -0.28
PHACTR4-204ENST00000493669 C9orf78Q9NZ63 289 aaPredicted RBP13.28□□□□□ -0.28
PHACTR4-204ENST00000493669 PAPPAQ13219 1627 aa13.28□□□□□ -0.28
PHACTR4-204ENST00000493669 REC8O95072 547 aa13.28□□□□□ -0.28
PHACTR4-204ENST00000493669 UBR2Q8IWV8 1755 aa13.27□□□□□ -0.28
PHACTR4-204ENST00000493669 SURF6O75683 361 aaKnown RBP13.27□□□□□ -0.28
PHACTR4-204ENST00000493669 NEXNQ0ZGT2 675 aa13.27□□□□□ -0.28
PHACTR4-204ENST00000493669 KIF2CQ99661 725 aa13.27□□□□□ -0.28
PHACTR4-204ENST00000493669 GRM8O00222 908 aa13.27□□□□□ -0.29
PHACTR4-204ENST00000493669 RHPN1Q8TCX5 695 aa13.26□□□□□ -0.29
PHACTR4-204ENST00000493669 SHANK3Q9BYB0 1731 aa13.26□□□□□ -0.29
PHACTR4-204ENST00000493669 AHDC1Q5TGY3 1603 aaPredicted RBP13.26□□□□□ -0.29
PHACTR4-204ENST00000493669 LRP10Q7Z4F1 713 aa13.26□□□□□ -0.29
PHACTR4-204ENST00000493669 RIC3Q7Z5B4 369 aa13.26□□□□□ -0.29
PHACTR4-204ENST00000493669 ERC1Q8IUD2 1116 aa13.26□□□□□ -0.29
PHACTR4-204ENST00000493669 USP26Q9BXU7 913 aa13.26□□□□□ -0.29
PHACTR4-204ENST00000493669 ERC2O15083 957 aa13.25□□□□□ -0.29
PHACTR4-204ENST00000493669 METTL22Q9BUU2 404 aaPredicted RBP13.25□□□□□ -0.29
PHACTR4-204ENST00000493669 COL22A1Q8NFW1 1626 aaPredicted RBP13.25□□□□□ -0.29
PHACTR4-204ENST00000493669 COL15A1P39059 1388 aa13.25□□□□□ -0.29
PHACTR4-204ENST00000493669 RABEP1Q15276 862 aa13.25□□□□□ -0.29
PHACTR4-204ENST00000493669 XAGE3Q8WTP9 111 aa13.25□□□□□ -0.29
PHACTR4-204ENST00000493669 USP42Q9H9J4 1324 aaKnown RBP13.25□□□□□ -0.29
PHACTR4-204ENST00000493669 COL14A1Q05707 1796 aaKnown RBP13.24□□□□□ -0.29
PHACTR4-204ENST00000493669 EVA1CP58658 441 aa13.24□□□□□ -0.29
PHACTR4-204ENST00000493669 TNS2Q63HR2 1409 aa13.24□□□□□ -0.29
PHACTR4-204ENST00000493669 EPB41L2O43491 1005 aaKnown RBP13.24□□□□□ -0.29
PHACTR4-204ENST00000493669 AIMP1Q12904 312 aaKnown RBP13.24□□□□□ -0.29
PHACTR4-204ENST00000493669 CWF19L2Q2TBE0 894 aaKnown RBP13.24□□□□□ -0.29
PHACTR4-204ENST00000493669 COPS6Q7L5N1 327 aa13.24□□□□□ -0.29
PHACTR4-204ENST00000493669 SLKQ9H2G2 1235 aaPredicted RBP13.24□□□□□ -0.29
PHACTR4-204ENST00000493669 KCPQ6ZWJ8 1503 aa13.24□□□□□ -0.29
PHACTR4-204ENST00000493669 USP16Q9Y5T5 823 aa13.24□□□□□ -0.29
PHACTR4-204ENST00000493669 NEURL1BA8MQ27 555 aa13.23□□□□□ -0.29
PHACTR4-204ENST00000493669 IGKV5-2P06315 115 aa13.23□□□□□ -0.29
PHACTR4-204ENST00000493669 ANKRD13DQ6ZTN6 518 aa13.23□□□□□ -0.29
PHACTR4-204ENST00000493669 BCL11AQ9H165 835 aa13.23□□□□□ -0.29
PHACTR4-204ENST00000493669 CHMP5Q9NZZ3 219 aa13.23□□□□□ -0.29
PHACTR4-204ENST00000493669 MYL6BP14649 208 aa13.23□□□□□ -0.29
PHACTR4-204ENST00000493669 TTC41PQ6P2S7 1318 aa13.23□□□□□ -0.29
PHACTR4-204ENST00000493669 GCKRQ14397 625 aa13.22□□□□□ -0.29
PHACTR4-204ENST00000493669 ARFGEF2Q9Y6D5 1785 aa13.22□□□□□ -0.29
PHACTR4-204ENST00000493669 SUCLG2Q96I99 432 aa13.22□□□□□ -0.29
PHACTR4-204ENST00000493669 IL1RAPL2Q9NP60 686 aa13.22□□□□□ -0.29
PHACTR4-204ENST00000493669 STRN4Q9NRL3 753 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms