RNA–Protein interactions for RNA: ENST00000493668.1

SHROOM2-204, Transcript of shroom family member 2, humanhuman

TSL 5

Gene SHROOM2, Length 855 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM2-204ENST00000493668 TEFQ10587 303 aa21.98■■□□□ 1.11
SHROOM2-204ENST00000493668 BCS1LQ9Y276 419 aa21.98■■□□□ 1.11
SHROOM2-204ENST00000493668 SCN7AQ01118 1682 aa21.98■■□□□ 1.11
SHROOM2-204ENST00000493668 C1QTNF8P60827 252 aa21.97■■□□□ 1.11
SHROOM2-204ENST00000493668 TTC5Q8N0Z6 440 aa21.97■■□□□ 1.11
SHROOM2-204ENST00000493668 ZNF496Q96IT1 587 aaPredicted RBP21.97■■□□□ 1.11
SHROOM2-204ENST00000493668 ZPR1O75312 459 aa21.96■■□□□ 1.11
SHROOM2-204ENST00000493668 U2AF1L5P0DN76 240 aaPredicted RBP21.96■■□□□ 1.11
SHROOM2-204ENST00000493668 U2AF1Q01081 240 aaKnown RBP eCLIP21.96■■□□□ 1.11
SHROOM2-204ENST00000493668 ZNF526Q8TF50 670 aaPredicted RBP21.96■■□□□ 1.11
SHROOM2-204ENST00000493668 CEMIPQ8WUJ3 1361 aa21.96■■□□□ 1.11
SHROOM2-204ENST00000493668 DLEC1Q9Y238 1755 aa21.95■■□□□ 1.1
SHROOM2-204ENST00000493668 POLRMTO00411 1230 aaKnown RBP21.95■■□□□ 1.1
SHROOM2-204ENST00000493668 CANXP27824 592 aaKnown RBP21.95■■□□□ 1.1
SHROOM2-204ENST00000493668 VSIG10Q8N0Z9 540 aa21.95■■□□□ 1.1
SHROOM2-204ENST00000493668 NUDCQ9Y266 331 aa21.95■■□□□ 1.1
SHROOM2-204ENST00000493668 HEG1Q9ULI3 1381 aa21.95■■□□□ 1.1
SHROOM2-204ENST00000493668 ZNF790Q6PG37 636 aa21.94■■□□□ 1.1
SHROOM2-204ENST00000493668 KCNQ3O43525 872 aa21.93■■□□□ 1.1
SHROOM2-204ENST00000493668 KCNA3P22001 575 aa21.93■■□□□ 1.1
SHROOM2-204ENST00000493668 TM4SF1P30408 202 aa21.93■■□□□ 1.1
SHROOM2-204ENST00000493668 BCORQ6W2J9 1755 aa21.93■■□□□ 1.1
SHROOM2-204ENST00000493668 BCL2L12Q9HB09 334 aa21.93■■□□□ 1.1
SHROOM2-204ENST00000493668 NARFQ9UHQ1 456 aa21.93■■□□□ 1.1
SHROOM2-204ENST00000493668 ANKRD31Q8N7Z5 1873 aa21.92■■□□□ 1.1
SHROOM2-204ENST00000493668 FCHSD2O94868 740 aa21.92■■□□□ 1.1
SHROOM2-204ENST00000493668 SBF1O95248 1867 aa21.92■■□□□ 1.1
SHROOM2-204ENST00000493668 SENP3-EIF4A1A0A087X0R7 540 aa21.91■■□□□ 1.1
SHROOM2-204ENST00000493668 CHRNA5P30532 468 aa21.91■■□□□ 1.1
SHROOM2-204ENST00000493668 NFIXQ14938 502 aa21.91■■□□□ 1.1
SHROOM2-204ENST00000493668 STARD3NLO95772 234 aa21.9■■□□□ 1.1
SHROOM2-204ENST00000493668 MCM10Q7L590 875 aa21.9■■□□□ 1.1
SHROOM2-204ENST00000493668 ZNF330Q9Y3S2 320 aaPredicted RBP21.9■■□□□ 1.1
SHROOM2-204ENST00000493668 DCTN1Q14203 1278 aa21.89■■□□□ 1.09
SHROOM2-204ENST00000493668 GPBP1L1Q9HC44 474 aaPredicted RBP21.89■■□□□ 1.09
SHROOM2-204ENST00000493668 CACNA1SQ13698 1873 aa21.89■■□□□ 1.09
SHROOM2-204ENST00000493668 CCDC88AQ3V6T2 1871 aa21.88■■□□□ 1.09
SHROOM2-204ENST00000493668 BTBD11A6QL63 1104 aa21.88■■□□□ 1.09
SHROOM2-204ENST00000493668 EIF5P55010 431 aaKnown RBP21.88■■□□□ 1.09
SHROOM2-204ENST00000493668 ARHGAP27Q6ZUM4 889 aa21.88■■□□□ 1.09
SHROOM2-204ENST00000493668 FMNL2Q96PY5 1086 aa21.88■■□□□ 1.09
SHROOM2-204ENST00000493668 COL11A2P13942 1736 aaPredicted RBP21.87■■□□□ 1.09
SHROOM2-204ENST00000493668 BICDL1Q6ZP65 573 aa21.87■■□□□ 1.09
SHROOM2-204ENST00000493668 LAMB4A4D0S4 1761 aa21.87■■□□□ 1.09
SHROOM2-204ENST00000493668 KDM3BQ7LBC6 1761 aa21.87■■□□□ 1.09
SHROOM2-204ENST00000493668 CARMIL3Q8ND23 1372 aa21.87■■□□□ 1.09
SHROOM2-204ENST00000493668 A1BGP04217 495 aa21.86■■□□□ 1.09
SHROOM2-204ENST00000493668 PIM2Q9P1W9 311 aa21.86■■□□□ 1.09
SHROOM2-204ENST00000493668 PRAMEF22A3QJZ6 481 aa21.85■■□□□ 1.09
SHROOM2-204ENST00000493668 SERPINB2P05120 415 aa21.85■■□□□ 1.09
SHROOM2-204ENST00000493668 PIP4K2AP48426 406 aaPredicted RBP21.85■■□□□ 1.09
SHROOM2-204ENST00000493668 RTF1Q92541 710 aaKnown RBP21.85■■□□□ 1.09
SHROOM2-204ENST00000493668 TEX13AQ9BXU3 409 aaPredicted RBP21.84■■□□□ 1.09
SHROOM2-204ENST00000493668 TBC1D2BQ9UPU7 963 aa21.84■■□□□ 1.09
SHROOM2-204ENST00000493668 DALRD3Q5D0E6 543 aaKnown RBP21.83■■□□□ 1.09
SHROOM2-204ENST00000493668 TBC1D9BQ66K14 1250 aa21.83■■□□□ 1.09
SHROOM2-204ENST00000493668 A0A087WZG4 1122 aa21.82■■□□□ 1.08
SHROOM2-204ENST00000493668 USP16Q9Y5T5 823 aa21.82■■□□□ 1.08
SHROOM2-204ENST00000493668 IL6STP40189 918 aaPredicted RBP21.8■■□□□ 1.08
SHROOM2-204ENST00000493668 CAMTA2O94983 1202 aa21.79■■□□□ 1.08
SHROOM2-204ENST00000493668 C9orf131Q5VYM1 1079 aa21.79■■□□□ 1.08
SHROOM2-204ENST00000493668 CCDC24Q8N4L8 307 aa21.79■■□□□ 1.08
SHROOM2-204ENST00000493668 TIAM2Q8IVF5 1701 aa21.78■■□□□ 1.08
SHROOM2-204ENST00000493668 MIS18AQ9NYP9 233 aa21.78■■□□□ 1.08
SHROOM2-204ENST00000493668 KIF3CO14782 793 aa21.77■■□□□ 1.08
SHROOM2-204ENST00000493668 C2CD5Q86YS7 1000 aa21.77■■□□□ 1.08
SHROOM2-204ENST00000493668 PLEKHF1Q96S99 279 aa21.77■■□□□ 1.08
SHROOM2-204ENST00000493668 HTATSF1O43719 755 aaKnown RBP21.76■■□□□ 1.07
SHROOM2-204ENST00000493668 SNRPA1P09661 255 aaKnown RBP21.76■■□□□ 1.07
SHROOM2-204ENST00000493668 RASSF7Q02833 373 aa21.76■■□□□ 1.07
SHROOM2-204ENST00000493668 DZIP3Q86Y13 1208 aaKnown RBP21.76■■□□□ 1.07
SHROOM2-204ENST00000493668 THUMPD2Q9BTF0 503 aaKnown RBP21.76■■□□□ 1.07
SHROOM2-204ENST00000493668 ARFGEF2Q9Y6D5 1785 aa21.76■■□□□ 1.07
SHROOM2-204ENST00000493668 TAF7Q15545 349 aaPredicted RBP21.75■■□□□ 1.07
SHROOM2-204ENST00000493668 RNF181Q9P0P0 153 aa21.75■■□□□ 1.07
SHROOM2-204ENST00000493668 NUP98P52948 1817 aa21.74■■□□□ 1.07
SHROOM2-204ENST00000493668 SLX4Q8IY92 1834 aa21.74■■□□□ 1.07
SHROOM2-204ENST00000493668 NEFMP07197 916 aa21.74■■□□□ 1.07
SHROOM2-204ENST00000493668 PRR5LQ6MZQ0 368 aa21.74■■□□□ 1.07
SHROOM2-204ENST00000493668 NPM2Q86SE8 214 aaKnown RBP21.74■■□□□ 1.07
SHROOM2-204ENST00000493668 NMRK2Q9NPI5 230 aa21.74■■□□□ 1.07
SHROOM2-204ENST00000493668 FER1L6Q2WGJ9 1857 aa21.74■■□□□ 1.07
SHROOM2-204ENST00000493668 TNRC6CQ9HCJ0 1690 aaKnown RBP21.73■■□□□ 1.07
SHROOM2-204ENST00000493668 NBPF26B4DH59 902 aa21.73■■□□□ 1.07
SHROOM2-204ENST00000493668 NFE2L2Q16236 605 aa21.73■■□□□ 1.07
SHROOM2-204ENST00000493668 NBPF10Q6P3W6 841 aaKnown RBP21.73■■□□□ 1.07
SHROOM2-204ENST00000493668 NBPF15Q8N660 670 aa21.73■■□□□ 1.07
SHROOM2-204ENST00000493668 DICER1Q9UPY3 1922 aaKnown RBP21.72■■□□□ 1.07
SHROOM2-204ENST00000493668 DDX10Q13206 875 aaKnown RBP21.72■■□□□ 1.07
SHROOM2-204ENST00000493668 H0YIN7 160 aa21.71■■□□□ 1.07
SHROOM2-204ENST00000493668 TTLL6Q8N841 843 aa21.71■■□□□ 1.07
SHROOM2-204ENST00000493668 SETDB2Q96T68 719 aa21.71■■□□□ 1.07
SHROOM2-204ENST00000493668 PRELPP51888 382 aa21.7■■□□□ 1.06
SHROOM2-204ENST00000493668 CNBD1Q8NA66 436 aa21.7■■□□□ 1.06
SHROOM2-204ENST00000493668 ZNF622Q969S3 477 aaKnown RBP eCLIP21.7■■□□□ 1.06
SHROOM2-204ENST00000493668 MAPK8IP3Q9UPT6 1336 aa21.7■■□□□ 1.06
SHROOM2-204ENST00000493668 NPHP1O15259 732 aa21.69■■□□□ 1.06
SHROOM2-204ENST00000493668 ZNF219Q9P2Y4 722 aaPredicted RBP21.69■■□□□ 1.06
SHROOM2-204ENST00000493668 RALBP1Q15311 655 aa21.68■■□□□ 1.06
SHROOM2-204ENST00000493668 BRIP1Q9BX63 1249 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms