RNA–Protein interactions for RNA: ENST00000493664.5

ZIC4-215, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 2,965 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-215ENST00000493664 ZBTB7CA1YPR0 619 aa17.05■□□□□ 0.32
ZIC4-215ENST00000493664 CEBPAP49715 358 aaPredicted RBP17.05■□□□□ 0.32
ZIC4-215ENST00000493664 ANAPC15P60006 121 aa17.05■□□□□ 0.32
ZIC4-215ENST00000493664 PPP1R42Q7Z4L9 355 aa17.05■□□□□ 0.32
ZIC4-215ENST00000493664 EIF2S2P20042 333 aaKnown RBP17.04■□□□□ 0.32
ZIC4-215ENST00000493664 RGPD8O14715 1765 aaPredicted RBP17.04■□□□□ 0.32
ZIC4-215ENST00000493664 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.04■□□□□ 0.32
ZIC4-215ENST00000493664 XRN1Q8IZH2 1706 aaKnown RBP17.04■□□□□ 0.32
ZIC4-215ENST00000493664 HDGFL1Q5TGJ6 251 aa17.04■□□□□ 0.32
ZIC4-215ENST00000493664 INTS4Q96HW7 963 aaKnown RBP17.04■□□□□ 0.32
ZIC4-215ENST00000493664 HS1BP3Q53T59 392 aa17.03■□□□□ 0.32
ZIC4-215ENST00000493664 USP48Q86UV5 1035 aa17.03■□□□□ 0.32
ZIC4-215ENST00000493664 UBR1Q8IWV7 1749 aa17.03■□□□□ 0.32
ZIC4-215ENST00000493664 SOS1Q07889 1333 aaPredicted RBP17.03■□□□□ 0.32
ZIC4-215ENST00000493664 TTC21AQ8NDW8 1320 aa17.03■□□□□ 0.32
ZIC4-215ENST00000493664 ZKSCAN5Q9Y2L8 839 aa17.03■□□□□ 0.32
ZIC4-215ENST00000493664 AEBP2Q6ZN18 517 aaPredicted RBP17.02■□□□□ 0.32
ZIC4-215ENST00000493664 SRCIN1Q9C0H9 1055 aa17.02■□□□□ 0.32
ZIC4-215ENST00000493664 BCL11BQ9C0K0 894 aaPredicted RBP17.02■□□□□ 0.32
ZIC4-215ENST00000493664 FAM208AQ9UK61 1670 aaKnown RBP17.02■□□□□ 0.32
ZIC4-215ENST00000493664 NBPF7P0C2Y1 421 aaPredicted RBP17.02■□□□□ 0.31
ZIC4-215ENST00000493664 SRGAP3O43295 1099 aa17.01■□□□□ 0.31
ZIC4-215ENST00000493664 ANXA1P04083 346 aa17.01■□□□□ 0.31
ZIC4-215ENST00000493664 CPA1P15085 419 aa17.01■□□□□ 0.31
ZIC4-215ENST00000493664 HOXC9P31274 260 aa17.01■□□□□ 0.31
ZIC4-215ENST00000493664 HSPA4P34932 840 aa17.01■□□□□ 0.31
ZIC4-215ENST00000493664 TAF7Q15545 349 aaPredicted RBP17.01■□□□□ 0.31
ZIC4-215ENST00000493664 SSH3Q8TE77 659 aa17.01■□□□□ 0.31
ZIC4-215ENST00000493664 TSPY26PQ9H489 355 aa17.01■□□□□ 0.31
ZIC4-215ENST00000493664 SETD1BQ9UPS6 1966 aaKnown RBP17.01■□□□□ 0.31
ZIC4-215ENST00000493664 ZNF500O60304 480 aaPredicted RBP17.01■□□□□ 0.31
ZIC4-215ENST00000493664 RASEFQ8IZ41 740 aa17.01■□□□□ 0.31
ZIC4-215ENST00000493664 RHPN1Q8TCX5 695 aa17.01■□□□□ 0.31
ZIC4-215ENST00000493664 SPG7Q9UQ90 795 aa17.01■□□□□ 0.31
ZIC4-215ENST00000493664 CWC27Q6UX04 472 aaKnown RBP17■□□□□ 0.31
ZIC4-215ENST00000493664 C14orf37Q86TY3 774 aa17■□□□□ 0.31
ZIC4-215ENST00000493664 PI4K2BQ8TCG2 481 aa17■□□□□ 0.31
ZIC4-215ENST00000493664 CNPY2Q9Y2B0 182 aa16.99■□□□□ 0.31
ZIC4-215ENST00000493664 MAP3K5Q99683 1374 aa16.99■□□□□ 0.31
ZIC4-215ENST00000493664 HTATSF1O43719 755 aaKnown RBP16.99■□□□□ 0.31
ZIC4-215ENST00000493664 SNX14Q9Y5W7 946 aa16.99■□□□□ 0.31
ZIC4-215ENST00000493664 PTMAP06454 111 aaKnown RBP16.98■□□□□ 0.31
ZIC4-215ENST00000493664 WDR33Q9C0J8 1336 aaKnown RBP16.98■□□□□ 0.31
ZIC4-215ENST00000493664 PLEKHG1Q9ULL1 1385 aa16.98■□□□□ 0.31
ZIC4-215ENST00000493664 RPAP1Q9BWH6 1393 aaPredicted RBP16.98■□□□□ 0.31
ZIC4-215ENST00000493664 SGSM2O43147 1006 aa16.98■□□□□ 0.31
ZIC4-215ENST00000493664 AK2P54819 239 aa16.98■□□□□ 0.31
ZIC4-215ENST00000493664 ABTB2Q8N961 1025 aa16.98■□□□□ 0.31
ZIC4-215ENST00000493664 CCDC39Q9UFE4 941 aa16.98■□□□□ 0.31
ZIC4-215ENST00000493664 PIK3C2AO00443 1686 aa16.97■□□□□ 0.31
ZIC4-215ENST00000493664 KCNQ3O43525 872 aa16.97■□□□□ 0.31
ZIC4-215ENST00000493664 FAM13BQ9NYF5 915 aa16.97■□□□□ 0.31
ZIC4-215ENST00000493664 CHPF2Q9P2E5 772 aa16.97■□□□□ 0.31
ZIC4-215ENST00000493664 RAD50Q92878 1312 aa16.97■□□□□ 0.31
ZIC4-215ENST00000493664 PI4KAP2A4QPH2 592 aa16.97■□□□□ 0.31
ZIC4-215ENST00000493664 PI4KAP1Q8N8J0 262 aa16.97■□□□□ 0.31
ZIC4-215ENST00000493664 DDX54Q8TDD1 881 aaKnown RBP16.97■□□□□ 0.31
ZIC4-215ENST00000493664 LGR6Q9HBX8 967 aa16.97■□□□□ 0.31
ZIC4-215ENST00000493664 SYAP1Q96A49 352 aaPredicted RBP16.96■□□□□ 0.31
ZIC4-215ENST00000493664 ZNF830Q96NB3 372 aaPredicted RBP16.96■□□□□ 0.31
ZIC4-215ENST00000493664 CACNA1FO60840 1977 aa16.96■□□□□ 0.31
ZIC4-215ENST00000493664 RUFY3Q7L099 469 aa16.96■□□□□ 0.31
ZIC4-215ENST00000493664 LSG1Q9H089 658 aaKnown RBP16.96■□□□□ 0.31
ZIC4-215ENST00000493664 UQCRHLA0A096LP55 91 aa16.95■□□□□ 0.3
ZIC4-215ENST00000493664 LARGE1O95461 756 aa16.95■□□□□ 0.3
ZIC4-215ENST00000493664 UQCRHP07919 91 aa16.95■□□□□ 0.3
ZIC4-215ENST00000493664 POLA2Q14181 598 aa16.95■□□□□ 0.3
ZIC4-215ENST00000493664 EID1Q9Y6B2 187 aa16.95■□□□□ 0.3
ZIC4-215ENST00000493664 LRRC37A3O60309 1634 aa16.95■□□□□ 0.3
ZIC4-215ENST00000493664 AOX1Q06278 1338 aa16.95■□□□□ 0.3
ZIC4-215ENST00000493664 FIBPO43427 364 aa16.95■□□□□ 0.3
ZIC4-215ENST00000493664 RAB11FIP3O75154 756 aa16.95■□□□□ 0.3
ZIC4-215ENST00000493664 SYT1P21579 422 aa16.95■□□□□ 0.3
ZIC4-215ENST00000493664 OS9Q13438 667 aaPredicted RBP16.95■□□□□ 0.3
ZIC4-215ENST00000493664 KIF1BPQ96EK5 621 aa16.95■□□□□ 0.3
ZIC4-215ENST00000493664 IL17RAQ96F46 866 aa16.95■□□□□ 0.3
ZIC4-215ENST00000493664 TTC14Q96N46 770 aa16.95■□□□□ 0.3
ZIC4-215ENST00000493664 USP25Q9UHP3 1055 aa16.95■□□□□ 0.3
ZIC4-215ENST00000493664 CNTROBQ8N137 903 aa16.94■□□□□ 0.3
ZIC4-215ENST00000493664 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.94■□□□□ 0.3
ZIC4-215ENST00000493664 NWD1Q149M9 1564 aa16.94■□□□□ 0.3
ZIC4-215ENST00000493664 CASTP20810 708 aaKnown RBP16.94■□□□□ 0.3
ZIC4-215ENST00000493664 ARID3AQ99856 593 aa16.93■□□□□ 0.3
ZIC4-215ENST00000493664 PDCL3Q9H2J4 239 aa16.93■□□□□ 0.3
ZIC4-215ENST00000493664 STX6O43752 255 aa16.93■□□□□ 0.3
ZIC4-215ENST00000493664 ZSCAN22P10073 491 aaPredicted RBP16.93■□□□□ 0.3
ZIC4-215ENST00000493664 HCLS1P14317 486 aaPredicted RBP16.93■□□□□ 0.3
ZIC4-215ENST00000493664 ADCK5Q3MIX3 580 aa16.92■□□□□ 0.3
ZIC4-215ENST00000493664 BEND3Q5T5X7 828 aa16.92■□□□□ 0.3
ZIC4-215ENST00000493664 DNAAF4Q8WXU2 420 aa16.92■□□□□ 0.3
ZIC4-215ENST00000493664 DIP2AQ14689 1571 aa16.92■□□□□ 0.3
ZIC4-215ENST00000493664 PTH1RQ03431 593 aa16.92■□□□□ 0.3
ZIC4-215ENST00000493664 CCDC83Q8IWF9 413 aa16.92■□□□□ 0.3
ZIC4-215ENST00000493664 LIMCH1Q9UPQ0 1083 aa16.92■□□□□ 0.3
ZIC4-215ENST00000493664 PHF14O94880 888 aa16.92■□□□□ 0.3
ZIC4-215ENST00000493664 EIF4A1P60842 406 aaKnown RBP16.92■□□□□ 0.3
ZIC4-215ENST00000493664 PA2G4Q9UQ80 394 aaKnown RBP16.92■□□□□ 0.3
ZIC4-215ENST00000493664 SMC3Q9UQE7 1217 aa16.92■□□□□ 0.3
ZIC4-215ENST00000493664 PXDNLA1KZ92 1463 aa16.91■□□□□ 0.3
ZIC4-215ENST00000493664 RBM33Q96EV2 1170 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms