RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 EIF4A1P60842 406 aaKnown RBP9.08□□□□□ -0.96
SMARCE1-211ENST00000493660 NFKBIBQ15653 356 aa9.08□□□□□ -0.96
SMARCE1-211ENST00000493660 ZKSCAN2Q63HK3 967 aa9.08□□□□□ -0.96
SMARCE1-211ENST00000493660 B4GALNT3Q6L9W6 998 aa9.08□□□□□ -0.96
SMARCE1-211ENST00000493660 MRPL50Q8N5N7 158 aaKnown RBP9.08□□□□□ -0.96
SMARCE1-211ENST00000493660 DDRGK1Q96HY6 314 aa9.08□□□□□ -0.96
SMARCE1-211ENST00000493660 ATRNO75882 1429 aa9.08□□□□□ -0.96
SMARCE1-211ENST00000493660 EXOC5O00471 708 aa9.08□□□□□ -0.96
SMARCE1-211ENST00000493660 PLIN1O60240 522 aa9.08□□□□□ -0.96
SMARCE1-211ENST00000493660 L1TD1Q5T7N2 865 aaKnown RBP9.08□□□□□ -0.96
SMARCE1-211ENST00000493660 MEX3CQ5U5Q3 659 aaKnown RBP9.08□□□□□ -0.96
SMARCE1-211ENST00000493660 TEX2Q8IWB9 1127 aa9.08□□□□□ -0.96
SMARCE1-211ENST00000493660 FTSJ3Q8IY81 847 aaKnown RBP9.08□□□□□ -0.96
SMARCE1-211ENST00000493660 MIS18AQ9NYP9 233 aa9.08□□□□□ -0.96
SMARCE1-211ENST00000493660 CABP4P57796 275 aa9.07□□□□□ -0.96
SMARCE1-211ENST00000493660 USP21Q9UK80 565 aa9.07□□□□□ -0.96
SMARCE1-211ENST00000493660 CCDC30Q5VVM6 783 aa9.07□□□□□ -0.96
SMARCE1-211ENST00000493660 MAP7D2Q96T17 732 aa9.07□□□□□ -0.96
SMARCE1-211ENST00000493660 CICQ96RK0 1608 aaPredicted RBP9.07□□□□□ -0.96
SMARCE1-211ENST00000493660 CHRM1P11229 460 aaPredicted RBP9.06□□□□□ -0.96
SMARCE1-211ENST00000493660 DDB1Q16531 1140 aa9.06□□□□□ -0.96
SMARCE1-211ENST00000493660 ATF7IPQ6VMQ6 1270 aa9.06□□□□□ -0.96
SMARCE1-211ENST00000493660 BCL2L13Q9BXK5 485 aa9.06□□□□□ -0.96
SMARCE1-211ENST00000493660 KCPQ6ZWJ8 1503 aa9.06□□□□□ -0.96
SMARCE1-211ENST00000493660 PTPRCP08575 1304 aa9.06□□□□□ -0.96
SMARCE1-211ENST00000493660 ELL2O00472 640 aaPredicted RBP9.06□□□□□ -0.96
SMARCE1-211ENST00000493660 KRT24Q2M2I5 525 aa9.06□□□□□ -0.96
SMARCE1-211ENST00000493660 ZNF790Q6PG37 636 aa9.06□□□□□ -0.96
SMARCE1-211ENST00000493660 DHX37Q8IY37 1157 aaKnown RBP9.06□□□□□ -0.96
SMARCE1-211ENST00000493660 NFATC2IPQ8NCF5 419 aa9.06□□□□□ -0.96
SMARCE1-211ENST00000493660 DDX54Q8TDD1 881 aaKnown RBP9.06□□□□□ -0.96
SMARCE1-211ENST00000493660 CRBNQ96SW2 442 aa9.06□□□□□ -0.96
SMARCE1-211ENST00000493660 CCDC9Q9Y3X0 531 aaKnown RBP9.06□□□□□ -0.96
SMARCE1-211ENST00000493660 AFF2P51816 1311 aa9.05□□□□□ -0.96
SMARCE1-211ENST00000493660 DZIP1LQ8IYY4 767 aaKnown RBP9.05□□□□□ -0.96
SMARCE1-211ENST00000493660 EXOC6Q8TAG9 804 aa9.05□□□□□ -0.96
SMARCE1-211ENST00000493660 STK31Q9BXU1 1019 aa9.05□□□□□ -0.96
SMARCE1-211ENST00000493660 API5Q9BZZ5 524 aaKnown RBP9.05□□□□□ -0.96
SMARCE1-211ENST00000493660 NOB1Q9ULX3 412 aaKnown RBP9.05□□□□□ -0.96
SMARCE1-211ENST00000493660 ZNF831Q5JPB2 1677 aa9.05□□□□□ -0.96
SMARCE1-211ENST00000493660 UTP14CQ5TAP6 766 aaKnown RBP9.05□□□□□ -0.96
SMARCE1-211ENST00000493660 C20orf194Q5TEA3 1177 aa9.05□□□□□ -0.96
SMARCE1-211ENST00000493660 TTC5Q8N0Z6 440 aa9.05□□□□□ -0.96
SMARCE1-211ENST00000493660 BCCIPQ9P287 314 aaKnown RBP eCLIP9.05□□□□□ -0.96
SMARCE1-211ENST00000493660 BCL9O00512 1426 aa9.04□□□□□ -0.96
SMARCE1-211ENST00000493660 KCNQ3O43525 872 aa9.04□□□□□ -0.96
SMARCE1-211ENST00000493660 GIGYF1O75420 1035 aaPredicted RBP9.04□□□□□ -0.96
SMARCE1-211ENST00000493660 TRIM27P14373 513 aa9.04□□□□□ -0.96
SMARCE1-211ENST00000493660 FMNL2Q96PY5 1086 aa9.04□□□□□ -0.96
SMARCE1-211ENST00000493660 TRPC5Q9UL62 973 aaPredicted RBP9.04□□□□□ -0.96
SMARCE1-211ENST00000493660 PXDNLA1KZ92 1463 aa9.04□□□□□ -0.96
SMARCE1-211ENST00000493660 NHSQ6T4R5 1651 aa9.04□□□□□ -0.96
SMARCE1-211ENST00000493660 HDGFL1Q5TGJ6 251 aa9.03□□□□□ -0.96
SMARCE1-211ENST00000493660 TMOD3Q9NYL9 352 aa9.03□□□□□ -0.96
SMARCE1-211ENST00000493660 ABCC4O15439 1325 aa9.03□□□□□ -0.96
SMARCE1-211ENST00000493660 RGS12O14924 1447 aa9.03□□□□□ -0.96
SMARCE1-211ENST00000493660 SBF2Q86WG5 1849 aa9.03□□□□□ -0.96
SMARCE1-211ENST00000493660 HOXD11P31277 338 aaPredicted RBP9.03□□□□□ -0.96
SMARCE1-211ENST00000493660 MVPQ14764 893 aaKnown RBP9.03□□□□□ -0.96
SMARCE1-211ENST00000493660 ZFP91Q96JP5 570 aaPredicted RBP9.03□□□□□ -0.96
SMARCE1-211ENST00000493660 GJD4Q96KN9 370 aaPredicted RBP9.03□□□□□ -0.96
SMARCE1-211ENST00000493660 SNRPA1P09661 255 aaKnown RBP9.02□□□□□ -0.96
SMARCE1-211ENST00000493660 SAMD1Q6SPF0 538 aaPredicted RBP9.02□□□□□ -0.96
SMARCE1-211ENST00000493660 PANK1Q8TE04 598 aa9.02□□□□□ -0.96
SMARCE1-211ENST00000493660 FBXO41Q8TF61 875 aa9.02□□□□□ -0.96
SMARCE1-211ENST00000493660 ERBB4Q15303 1308 aa9.02□□□□□ -0.97
SMARCE1-211ENST00000493660 TJP1Q07157 1748 aa9.02□□□□□ -0.97
SMARCE1-211ENST00000493660 ONECUT3O60422 494 aaPredicted RBP9.02□□□□□ -0.97
SMARCE1-211ENST00000493660 SLC4A2P04920 1241 aa9.02□□□□□ -0.97
SMARCE1-211ENST00000493660 RLBP1P12271 317 aa9.02□□□□□ -0.97
SMARCE1-211ENST00000493660 FAM98CQ17RN3 349 aaKnown RBP9.02□□□□□ -0.97
SMARCE1-211ENST00000493660 DDX19BQ9UMR2 479 aa9.02□□□□□ -0.97
SMARCE1-211ENST00000493660 SLC39A6Q13433 755 aa9.01□□□□□ -0.97
SMARCE1-211ENST00000493660 MARCH10Q8NA82 808 aaPredicted RBP9.01□□□□□ -0.97
SMARCE1-211ENST00000493660 ZNF496Q96IT1 587 aaPredicted RBP9.01□□□□□ -0.97
SMARCE1-211ENST00000493660 DBF4Q9UBU7 674 aaPredicted RBP9.01□□□□□ -0.97
SMARCE1-211ENST00000493660 COG6Q9Y2V7 657 aa9.01□□□□□ -0.97
SMARCE1-211ENST00000493660 RREB1Q92766 1687 aa9.01□□□□□ -0.97
SMARCE1-211ENST00000493660 BRWD3Q6RI45 1802 aa9.01□□□□□ -0.97
SMARCE1-211ENST00000493660 TCERG1O14776 1098 aaKnown RBP9□□□□□ -0.97
SMARCE1-211ENST00000493660 FLIIQ13045 1269 aa9□□□□□ -0.97
SMARCE1-211ENST00000493660 INTS3Q68E01 1043 aaKnown RBP9□□□□□ -0.97
SMARCE1-211ENST00000493660 TMEM57Q8N5G2 664 aa9□□□□□ -0.97
SMARCE1-211ENST00000493660 PIGBQ92521 554 aa9□□□□□ -0.97
SMARCE1-211ENST00000493660 HYPKQ9NX55 129 aa9□□□□□ -0.97
SMARCE1-211ENST00000493660 TNNQ9UQP3 1299 aa9□□□□□ -0.97
SMARCE1-211ENST00000493660 KAT6BQ8WYB5 2073 aa9□□□□□ -0.97
SMARCE1-211ENST00000493660 BTAF1O14981 1849 aa9□□□□□ -0.97
SMARCE1-211ENST00000493660 ZNF772Q68DY9 489 aaPredicted RBP9□□□□□ -0.97
SMARCE1-211ENST00000493660 CLUAP1Q96AJ1 413 aa9□□□□□ -0.97
SMARCE1-211ENST00000493660 TEX13AQ9BXU3 409 aaPredicted RBP9□□□□□ -0.97
SMARCE1-211ENST00000493660 DDX21Q9NR30 783 aaKnown RBP eCLIP9□□□□□ -0.97
SMARCE1-211ENST00000493660 ARFGEF2Q9Y6D5 1785 aa8.99□□□□□ -0.97
SMARCE1-211ENST00000493660 EIF2S2P20042 333 aaKnown RBP8.99□□□□□ -0.97
SMARCE1-211ENST00000493660 NPM2Q86SE8 214 aaKnown RBP8.99□□□□□ -0.97
SMARCE1-211ENST00000493660 ITPRIPQ8IWB1 547 aa8.99□□□□□ -0.97
SMARCE1-211ENST00000493660 CHPF2Q9P2E5 772 aa8.99□□□□□ -0.97
SMARCE1-211ENST00000493660 COL5A3P25940 1745 aaPredicted RBP8.99□□□□□ -0.97
SMARCE1-211ENST00000493660 NUP188Q5SRE5 1749 aa8.99□□□□□ -0.97
SMARCE1-211ENST00000493660 ATP10DQ9P241 1426 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms