RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 NUDCQ9Y266 331 aa19.62■□□□□ 0.73
ATG4B-223ENST00000493618 ARFGEF1Q9Y6D6 1849 aa19.62■□□□□ 0.73
ATG4B-223ENST00000493618 ZPR1O75312 459 aa19.61■□□□□ 0.73
ATG4B-223ENST00000493618 CANXP27824 592 aaKnown RBP19.61■□□□□ 0.73
ATG4B-223ENST00000493618 TGFB2P61812 414 aa19.61■□□□□ 0.73
ATG4B-223ENST00000493618 BCS1LQ9Y276 419 aa19.61■□□□□ 0.73
ATG4B-223ENST00000493618 VSIG10Q8N0Z9 540 aa19.6■□□□□ 0.73
ATG4B-223ENST00000493618 ZNF496Q96IT1 587 aaPredicted RBP19.6■□□□□ 0.73
ATG4B-223ENST00000493618 GIGYF1O75420 1035 aaPredicted RBP19.59■□□□□ 0.73
ATG4B-223ENST00000493618 ZNF790Q6PG37 636 aa19.59■□□□□ 0.73
ATG4B-223ENST00000493618 ZNF526Q8TF50 670 aaPredicted RBP19.59■□□□□ 0.73
ATG4B-223ENST00000493618 HEG1Q9ULI3 1381 aa19.58■□□□□ 0.73
ATG4B-223ENST00000493618 KCNQ3O43525 872 aa19.58■□□□□ 0.72
ATG4B-223ENST00000493618 TM4SF1P30408 202 aa19.58■□□□□ 0.72
ATG4B-223ENST00000493618 C1QTNF8P60827 252 aa19.58■□□□□ 0.72
ATG4B-223ENST00000493618 NRXN2Q9P2S2 1712 aa19.58■□□□□ 0.72
ATG4B-223ENST00000493618 CEMIPQ8WUJ3 1361 aa19.57■□□□□ 0.72
ATG4B-223ENST00000493618 SCN7AQ01118 1682 aa19.57■□□□□ 0.72
ATG4B-223ENST00000493618 POLRMTO00411 1230 aaKnown RBP19.57■□□□□ 0.72
ATG4B-223ENST00000493618 NARFQ9UHQ1 456 aa19.57■□□□□ 0.72
ATG4B-223ENST00000493618 ADCY9O60503 1353 aa19.57■□□□□ 0.72
ATG4B-223ENST00000493618 BTBD11A6QL63 1104 aa19.56■□□□□ 0.72
ATG4B-223ENST00000493618 FCHSD2O94868 740 aa19.56■□□□□ 0.72
ATG4B-223ENST00000493618 STARD3NLO95772 234 aa19.56■□□□□ 0.72
ATG4B-223ENST00000493618 KCNA3P22001 575 aa19.56■□□□□ 0.72
ATG4B-223ENST00000493618 MCM10Q7L590 875 aa19.56■□□□□ 0.72
ATG4B-223ENST00000493618 BCL2L12Q9HB09 334 aa19.56■□□□□ 0.72
ATG4B-223ENST00000493618 ZNF330Q9Y3S2 320 aaPredicted RBP19.56■□□□□ 0.72
ATG4B-223ENST00000493618 CHRNA5P30532 468 aa19.55■□□□□ 0.72
ATG4B-223ENST00000493618 DCTN1Q14203 1278 aa19.55■□□□□ 0.72
ATG4B-223ENST00000493618 NFIXQ14938 502 aa19.55■□□□□ 0.72
ATG4B-223ENST00000493618 DLEC1Q9Y238 1755 aa19.55■□□□□ 0.72
ATG4B-223ENST00000493618 ARHGAP27Q6ZUM4 889 aa19.54■□□□□ 0.72
ATG4B-223ENST00000493618 FMNL2Q96PY5 1086 aa19.54■□□□□ 0.72
ATG4B-223ENST00000493618 BCORQ6W2J9 1755 aa19.53■□□□□ 0.72
ATG4B-223ENST00000493618 BICDL1Q6ZP65 573 aa19.53■□□□□ 0.72
ATG4B-223ENST00000493618 RTF1Q92541 710 aaKnown RBP19.53■□□□□ 0.72
ATG4B-223ENST00000493618 ANKRD31Q8N7Z5 1873 aa19.52■□□□□ 0.72
ATG4B-223ENST00000493618 A1BGP04217 495 aa19.52■□□□□ 0.72
ATG4B-223ENST00000493618 EIF5P55010 431 aaKnown RBP19.52■□□□□ 0.72
ATG4B-223ENST00000493618 GPBP1L1Q9HC44 474 aaPredicted RBP19.52■□□□□ 0.72
ATG4B-223ENST00000493618 PRAMEF22A3QJZ6 481 aa19.51■□□□□ 0.71
ATG4B-223ENST00000493618 TEX13AQ9BXU3 409 aaPredicted RBP19.51■□□□□ 0.71
ATG4B-223ENST00000493618 PIM2Q9P1W9 311 aa19.51■□□□□ 0.71
ATG4B-223ENST00000493618 TBC1D2BQ9UPU7 963 aa19.51■□□□□ 0.71
ATG4B-223ENST00000493618 SBF1O95248 1867 aa19.51■□□□□ 0.71
ATG4B-223ENST00000493618 CACNA1SQ13698 1873 aa19.5■□□□□ 0.71
ATG4B-223ENST00000493618 SERPINB2P05120 415 aa19.5■□□□□ 0.71
ATG4B-223ENST00000493618 PIP4K2AP48426 406 aaPredicted RBP19.5■□□□□ 0.71
ATG4B-223ENST00000493618 KDM3BQ7LBC6 1761 aa19.49■□□□□ 0.71
ATG4B-223ENST00000493618 A0A087WZG4 1122 aa19.49■□□□□ 0.71
ATG4B-223ENST00000493618 DALRD3Q5D0E6 543 aaKnown RBP19.49■□□□□ 0.71
ATG4B-223ENST00000493618 CCDC88AQ3V6T2 1871 aa19.49■□□□□ 0.71
ATG4B-223ENST00000493618 LAMB4A4D0S4 1761 aa19.49■□□□□ 0.71
ATG4B-223ENST00000493618 CARMIL3Q8ND23 1372 aa19.48■□□□□ 0.71
ATG4B-223ENST00000493618 TBC1D9BQ66K14 1250 aa19.48■□□□□ 0.71
ATG4B-223ENST00000493618 USP16Q9Y5T5 823 aa19.48■□□□□ 0.71
ATG4B-223ENST00000493618 COL11A2P13942 1736 aaPredicted RBP19.48■□□□□ 0.71
ATG4B-223ENST00000493618 IL6STP40189 918 aaPredicted RBP19.47■□□□□ 0.71
ATG4B-223ENST00000493618 MIS18AQ9NYP9 233 aa19.47■□□□□ 0.71
ATG4B-223ENST00000493618 CCDC24Q8N4L8 307 aa19.46■□□□□ 0.71
ATG4B-223ENST00000493618 HTATSF1O43719 755 aaKnown RBP19.45■□□□□ 0.7
ATG4B-223ENST00000493618 NEFMP07197 916 aa19.45■□□□□ 0.7
ATG4B-223ENST00000493618 DDX10Q13206 875 aaKnown RBP19.44■□□□□ 0.7
ATG4B-223ENST00000493618 NPM2Q86SE8 214 aaKnown RBP19.44■□□□□ 0.7
ATG4B-223ENST00000493618 C2CD5Q86YS7 1000 aa19.44■□□□□ 0.7
ATG4B-223ENST00000493618 PLEKHF1Q96S99 279 aa19.44■□□□□ 0.7
ATG4B-223ENST00000493618 CAMTA2O94983 1202 aa19.43■□□□□ 0.7
ATG4B-223ENST00000493618 SNRPA1P09661 255 aaKnown RBP19.43■□□□□ 0.7
ATG4B-223ENST00000493618 TAF7Q15545 349 aaPredicted RBP19.43■□□□□ 0.7
ATG4B-223ENST00000493618 C9orf131Q5VYM1 1079 aa19.43■□□□□ 0.7
ATG4B-223ENST00000493618 DZIP3Q86Y13 1208 aaKnown RBP19.43■□□□□ 0.7
ATG4B-223ENST00000493618 THUMPD2Q9BTF0 503 aaKnown RBP19.42■□□□□ 0.7
ATG4B-223ENST00000493618 NFE2L2Q16236 605 aa19.41■□□□□ 0.7
ATG4B-223ENST00000493618 NBPF26B4DH59 902 aa19.4■□□□□ 0.7
ATG4B-223ENST00000493618 H0YIN7 160 aa19.4■□□□□ 0.7
ATG4B-223ENST00000493618 KIF3CO14782 793 aa19.4■□□□□ 0.7
ATG4B-223ENST00000493618 RASSF7Q02833 373 aa19.4■□□□□ 0.7
ATG4B-223ENST00000493618 PRR5LQ6MZQ0 368 aa19.4■□□□□ 0.7
ATG4B-223ENST00000493618 NBPF10Q6P3W6 841 aaKnown RBP19.4■□□□□ 0.7
ATG4B-223ENST00000493618 NBPF15Q8N660 670 aa19.4■□□□□ 0.7
ATG4B-223ENST00000493618 RNF181Q9P0P0 153 aa19.4■□□□□ 0.7
ATG4B-223ENST00000493618 MAPK8IP3Q9UPT6 1336 aa19.4■□□□□ 0.7
ATG4B-223ENST00000493618 TIAM2Q8IVF5 1701 aa19.39■□□□□ 0.7
ATG4B-223ENST00000493618 SETDB2Q96T68 719 aa19.39■□□□□ 0.69
ATG4B-223ENST00000493618 NUP98P52948 1817 aa19.39■□□□□ 0.69
ATG4B-223ENST00000493618 NPHP1O15259 732 aa19.38■□□□□ 0.69
ATG4B-223ENST00000493618 RALBP1Q15311 655 aa19.38■□□□□ 0.69
ATG4B-223ENST00000493618 TTLL6Q8N841 843 aa19.38■□□□□ 0.69
ATG4B-223ENST00000493618 ARFGEF2Q9Y6D5 1785 aa19.38■□□□□ 0.69
ATG4B-223ENST00000493618 SLX4Q8IY92 1834 aa19.37■□□□□ 0.69
ATG4B-223ENST00000493618 ZNF622Q969S3 477 aaKnown RBP eCLIP19.37■□□□□ 0.691e-6■■□□□ 11.8
ATG4B-223ENST00000493618 NMRK2Q9NPI5 230 aa19.37■□□□□ 0.69
ATG4B-223ENST00000493618 ZNF219Q9P2Y4 722 aaPredicted RBP19.37■□□□□ 0.69
ATG4B-223ENST00000493618 CNBD1Q8NA66 436 aa19.36■□□□□ 0.69
ATG4B-223ENST00000493618 PNNQ9H307 717 aaKnown RBP19.36■□□□□ 0.69
ATG4B-223ENST00000493618 FER1L6Q2WGJ9 1857 aa19.36■□□□□ 0.69
ATG4B-223ENST00000493618 PDE6BP35913 854 aa19.35■□□□□ 0.69
ATG4B-223ENST00000493618 NGEFQ8N5V2 710 aa19.35■□□□□ 0.69
ATG4B-223ENST00000493618 PNISRQ8TF01 805 aaKnown RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms