RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 FAM182BQ5T319 152 aa8.6□□□□□ -1.03
CLIP4-212ENST00000493551 TBC1D9Q6ZT07 1266 aa8.6□□□□□ -1.03
CLIP4-212ENST00000493551 PPARGC1BQ86YN6 1023 aaKnown RBP8.6□□□□□ -1.03
CLIP4-212ENST00000493551 TRIM11Q96F44 468 aa8.6□□□□□ -1.03
CLIP4-212ENST00000493551 PLVAPQ9BX97 442 aa8.6□□□□□ -1.03
CLIP4-212ENST00000493551 SMARCA2P51531 1590 aa8.6□□□□□ -1.03
CLIP4-212ENST00000493551 NLRP8Q86W28 1048 aa8.59□□□□□ -1.03
CLIP4-212ENST00000493551 FCHSD1Q86WN1 690 aa8.59□□□□□ -1.03
CLIP4-212ENST00000493551 C1orf216Q8TAB5 229 aa8.59□□□□□ -1.03
CLIP4-212ENST00000493551 KRTAP4-12Q9BQ66 201 aa8.59□□□□□ -1.03
CLIP4-212ENST00000493551 ZCCHC2Q9C0B9 1178 aaKnown RBP8.59□□□□□ -1.03
CLIP4-212ENST00000493551 ATXN7O15265 892 aaPredicted RBP8.58□□□□□ -1.04
CLIP4-212ENST00000493551 FOXD4L6Q3SYB3 417 aaPredicted RBP8.58□□□□□ -1.04
CLIP4-212ENST00000493551 NKAPLQ5M9Q1 402 aa8.58□□□□□ -1.04
CLIP4-212ENST00000493551 FOXD4L3Q6VB84 417 aaPredicted RBP8.58□□□□□ -1.04
CLIP4-212ENST00000493551 ZFP64Q9NPA5 681 aa8.58□□□□□ -1.04
CLIP4-212ENST00000493551 ATAD2BQ9ULI0 1458 aa8.57□□□□□ -1.04
CLIP4-212ENST00000493551 SPDYE3A6NKU9 549 aa8.57□□□□□ -1.04
CLIP4-212ENST00000493551 PLA2G4AP47712 749 aa8.57□□□□□ -1.04
CLIP4-212ENST00000493551 TLR1Q15399 786 aa8.57□□□□□ -1.04
CLIP4-212ENST00000493551 CDCA7Q9BWT1 371 aaPredicted RBP8.57□□□□□ -1.04
CLIP4-212ENST00000493551 KLF15Q9UIH9 416 aa8.57□□□□□ -1.04
CLIP4-212ENST00000493551 NCAPD3P42695 1498 aa8.57□□□□□ -1.04
CLIP4-212ENST00000493551 ARTNQ5T4W7 220 aa8.56□□□□□ -1.04
CLIP4-212ENST00000493551 CCDC85AQ96PX6 553 aaPredicted RBP8.56□□□□□ -1.04
CLIP4-212ENST00000493551 HCN2Q9UL51 889 aa8.56□□□□□ -1.04
CLIP4-212ENST00000493551 DCDC2BA2VCK2 349 aa8.55□□□□□ -1.04
CLIP4-212ENST00000493551 MAPTP10636 758 aaKnown RBP8.55□□□□□ -1.04
CLIP4-212ENST00000493551 ATP4AP20648 1035 aa8.55□□□□□ -1.04
CLIP4-212ENST00000493551 PCMTD1Q96MG8 357 aaPredicted RBP8.55□□□□□ -1.04
CLIP4-212ENST00000493551 ETNK1Q9HBU6 452 aa8.55□□□□□ -1.04
CLIP4-212ENST00000493551 GOPCQ9HD26 462 aa8.55□□□□□ -1.04
CLIP4-212ENST00000493551 TPSG1Q9NRR2 321 aa8.55□□□□□ -1.04
CLIP4-212ENST00000493551 THOC2Q8NI27 1593 aaKnown RBP8.54□□□□□ -1.04
CLIP4-212ENST00000493551 DYRK3O43781 588 aa8.54□□□□□ -1.04
CLIP4-212ENST00000493551 CD33P20138 364 aa8.54□□□□□ -1.04
CLIP4-212ENST00000493551 TNP2Q05952 138 aa8.54□□□□□ -1.04
CLIP4-212ENST00000493551 PRRT3Q5FWE3 981 aa8.54□□□□□ -1.04
CLIP4-212ENST00000493551 ZNF468Q5VIY5 522 aaPredicted RBP8.54□□□□□ -1.04
CLIP4-212ENST00000493551 APBA3O96018 575 aa8.53□□□□□ -1.04
CLIP4-212ENST00000493551 NBPF11Q86T75 865 aa8.53□□□□□ -1.04
CLIP4-212ENST00000493551 CEP126Q9P2H0 1117 aa8.53□□□□□ -1.04
CLIP4-212ENST00000493551 KHNYNO15037 678 aaKnown RBP8.52□□□□□ -1.05
CLIP4-212ENST00000493551 GPR37L1O60883 481 aa8.52□□□□□ -1.05
CLIP4-212ENST00000493551 STAU1O95793 577 aaKnown RBP8.52□□□□□ -1.05
CLIP4-212ENST00000493551 USP4Q13107 963 aa8.52□□□□□ -1.05
CLIP4-212ENST00000493551 A0A1W2PNR3 127 aa8.51□□□□□ -1.05
CLIP4-212ENST00000493551 SOCS7O14512 581 aa8.51□□□□□ -1.05
CLIP4-212ENST00000493551 PCBP4P57723 403 aaKnown RBP8.51□□□□□ -1.05
CLIP4-212ENST00000493551 AIDAQ96BJ3 306 aa8.51□□□□□ -1.05
CLIP4-212ENST00000493551 NIFKQ9BYG3 293 aaKnown RBP8.51□□□□□ -1.05
CLIP4-212ENST00000493551 PRR12Q9ULL5 1215 aa8.51□□□□□ -1.05
CLIP4-212ENST00000493551 NDUFB9Q9Y6M9 179 aa8.51□□□□□ -1.05
CLIP4-212ENST00000493551 BAZ1BQ9UIG0 1483 aaKnown RBP8.51□□□□□ -1.05
CLIP4-212ENST00000493551 SMARCA4P51532 1647 aa8.51□□□□□ -1.05
CLIP4-212ENST00000493551 KIF21AQ7Z4S6 1674 aa8.5□□□□□ -1.05
CLIP4-212ENST00000493551 ELOA3CA0A087WX78 387 aaPredicted RBP8.5□□□□□ -1.05
CLIP4-212ENST00000493551 ELOA3DA6NLF2 546 aaPredicted RBP8.5□□□□□ -1.05
CLIP4-212ENST00000493551 FAM157BP0CG42 384 aa8.5□□□□□ -1.05
CLIP4-212ENST00000493551 NBPF1Q3BBV0 1214 aa8.5□□□□□ -1.05
CLIP4-212ENST00000493551 ELOA3BQ3SY89 546 aa8.5□□□□□ -1.05
CLIP4-212ENST00000493551 ARSJQ5FYB0 599 aaPredicted RBP8.5□□□□□ -1.05
CLIP4-212ENST00000493551 ELOA3Q8NG57 546 aa8.5□□□□□ -1.05
CLIP4-212ENST00000493551 DOLKQ9UPQ8 538 aa8.5□□□□□ -1.05
CLIP4-212ENST00000493551 ALAS2P22557 587 aa8.49□□□□□ -1.05
CLIP4-212ENST00000493551 NACC1Q96RE7 527 aa8.49□□□□□ -1.05
CLIP4-212ENST00000493551 HMGXB3Q12766 1538 aa8.49□□□□□ -1.05
CLIP4-212ENST00000493551 TATP17735 454 aaPredicted RBP8.48□□□□□ -1.05
CLIP4-212ENST00000493551 PRSS36Q5K4E3 855 aa8.48□□□□□ -1.05
CLIP4-212ENST00000493551 SIRT1Q96EB6 747 aa8.48□□□□□ -1.05
CLIP4-212ENST00000493551 BTBD11A6QL63 1104 aa8.47□□□□□ -1.05
CLIP4-212ENST00000493551 LAMC2Q13753 1193 aa8.47□□□□□ -1.05
CLIP4-212ENST00000493551 TSGA10IPQ3SY00 556 aa8.47□□□□□ -1.05
CLIP4-212ENST00000493551 ZDHHC3Q9NYG2 299 aa8.47□□□□□ -1.05
CLIP4-212ENST00000493551 MARK1Q9P0L2 795 aa8.47□□□□□ -1.05
CLIP4-212ENST00000493551 APBB1O00213 710 aa8.46□□□□□ -1.06
CLIP4-212ENST00000493551 INHAP05111 366 aa8.46□□□□□ -1.06
CLIP4-212ENST00000493551 SAMD5Q5TGI4 173 aa8.46□□□□□ -1.06
CLIP4-212ENST00000493551 GJA3Q9Y6H8 435 aa8.46□□□□□ -1.06
CLIP4-212ENST00000493551 SCNN1DP51172 638 aa8.45□□□□□ -1.06
CLIP4-212ENST00000493551 LRP8Q14114 963 aa8.45□□□□□ -1.06
CLIP4-212ENST00000493551 BANK1Q8NDB2 785 aa8.45□□□□□ -1.06
CLIP4-212ENST00000493551 EFSO43281 561 aa8.44□□□□□ -1.06
CLIP4-212ENST00000493551 SMTNP53814 917 aa8.44□□□□□ -1.06
CLIP4-212ENST00000493551 GDF10P55107 478 aa8.44□□□□□ -1.06
CLIP4-212ENST00000493551 ZIC5Q96T25 663 aa8.44□□□□□ -1.06
CLIP4-212ENST00000493551 MDFIQ99750 246 aa8.44□□□□□ -1.06
CLIP4-212ENST00000493551 PRDM6Q9NQX0 595 aa8.44□□□□□ -1.06
CLIP4-212ENST00000493551 LAMC3Q9Y6N6 1575 aa8.44□□□□□ -1.06
CLIP4-212ENST00000493551 TRIM28Q13263 835 aaKnown RBP8.43□□□□□ -1.06
CLIP4-212ENST00000493551 SLFNL1Q499Z3 407 aa8.43□□□□□ -1.06
CLIP4-212ENST00000493551 OXLD1Q5BKU9 147 aa8.43□□□□□ -1.06
CLIP4-212ENST00000493551 SYT9Q86SS6 491 aa8.43□□□□□ -1.06
CLIP4-212ENST00000493551 PHTF2Q8N3S3 785 aa8.43□□□□□ -1.06
CLIP4-212ENST00000493551 MTMR14Q8NCE2 650 aa8.43□□□□□ -1.06
CLIP4-212ENST00000493551 FAM229AH3BQW9 127 aa8.42□□□□□ -1.06
CLIP4-212ENST00000493551 M0R082 166 aa8.42□□□□□ -1.06
CLIP4-212ENST00000493551 H2AFB1P0C5Y9 115 aa8.42□□□□□ -1.06
CLIP4-212ENST00000493551 H2AFB2P0C5Z0 115 aa8.42□□□□□ -1.06
CLIP4-212ENST00000493551 ZNF295-AS1Q8N0V1 137 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms