RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 PHKG2P15735 406 aa7.67□□□□□ -1.18
NF1-215ENST00000493220 ZSCAN25Q6NSZ9 544 aa7.67□□□□□ -1.18
NF1-215ENST00000493220 PAXIP1Q6ZW49 1069 aaPredicted RBP7.67□□□□□ -1.18
NF1-215ENST00000493220 RPAP2Q8IXW5 612 aaPredicted RBP7.67□□□□□ -1.18
NF1-215ENST00000493220 ADGRB1O14514 1584 aa7.67□□□□□ -1.18
NF1-215ENST00000493220 ANKRD18BA2A2Z9 1011 aa7.67□□□□□ -1.18
NF1-215ENST00000493220 HSPA1LP34931 641 aa7.67□□□□□ -1.18
NF1-215ENST00000493220 FLIIQ13045 1269 aa7.67□□□□□ -1.18
NF1-215ENST00000493220 NBPF5PQ86XG9 351 aaPredicted RBP7.67□□□□□ -1.18
NF1-215ENST00000493220 MAP3K2Q9Y2U5 619 aa7.67□□□□□ -1.18
NF1-215ENST00000493220 OVOS2A0A0G2JMS6 1433 aa7.67□□□□□ -1.18
NF1-215ENST00000493220 OVOS2A0A0J9YW53 1432 aa7.67□□□□□ -1.18
NF1-215ENST00000493220 OVOS2Q6IE36 1432 aa7.67□□□□□ -1.18
NF1-215ENST00000493220 CNTROBQ8N137 903 aa7.67□□□□□ -1.18
NF1-215ENST00000493220 CRB1P82279 1406 aa7.66□□□□□ -1.18
NF1-215ENST00000493220 IGSF1Q8N6C5 1336 aa7.66□□□□□ -1.18
NF1-215ENST00000493220 RAB11FIP3O75154 756 aa7.66□□□□□ -1.18
NF1-215ENST00000493220 DDX46Q7L014 1031 aaKnown RBP7.66□□□□□ -1.18
NF1-215ENST00000493220 DZIP3Q86Y13 1208 aaKnown RBP7.66□□□□□ -1.18
NF1-215ENST00000493220 ERBB3P21860 1342 aa7.66□□□□□ -1.18
NF1-215ENST00000493220 CCDC152Q4G0S7 254 aa7.66□□□□□ -1.18
NF1-215ENST00000493220 VSIG10Q8N0Z9 540 aa7.66□□□□□ -1.18
NF1-215ENST00000493220 ARHGAP45Q92619 1136 aa7.66□□□□□ -1.18
NF1-215ENST00000493220 UTP14AQ9BVJ6 771 aaKnown RBP7.66□□□□□ -1.18
NF1-215ENST00000493220 NCAPD2Q15021 1401 aa7.66□□□□□ -1.18
NF1-215ENST00000493220 ANKRD13DQ6ZTN6 518 aa7.66□□□□□ -1.18
NF1-215ENST00000493220 MST1RQ04912 1400 aa7.66□□□□□ -1.18
NF1-215ENST00000493220 RARSP54136 660 aaKnown RBP7.66□□□□□ -1.18
NF1-215ENST00000493220 IFIT5Q13325 482 aaKnown RBP7.66□□□□□ -1.18
NF1-215ENST00000493220 ZNF790Q6PG37 636 aa7.66□□□□□ -1.18
NF1-215ENST00000493220 ZNF142P52746 1687 aaPredicted RBP7.66□□□□□ -1.18
NF1-215ENST00000493220 LRRCC1Q9C099 1032 aa7.65□□□□□ -1.18
NF1-215ENST00000493220 GNPATO15228 680 aa7.65□□□□□ -1.18
NF1-215ENST00000493220 ALDH1L1O75891 902 aa7.65□□□□□ -1.18
NF1-215ENST00000493220 PRIM1P49642 420 aaKnown RBP7.65□□□□□ -1.18
NF1-215ENST00000493220 CCDC87Q9NVE4 849 aa7.65□□□□□ -1.18
NF1-215ENST00000493220 CEP126Q9P2H0 1117 aa7.65□□□□□ -1.18
NF1-215ENST00000493220 BCAR3O75815 825 aa7.65□□□□□ -1.18
NF1-215ENST00000493220 SLC3A2P08195 630 aaKnown RBP7.65□□□□□ -1.18
NF1-215ENST00000493220 SLC39A6Q13433 755 aa7.65□□□□□ -1.18
NF1-215ENST00000493220 CAVIN4Q5BKX8 364 aa7.65□□□□□ -1.18
NF1-215ENST00000493220 RNF20Q5VTR2 975 aa7.65□□□□□ -1.18
NF1-215ENST00000493220 ZBTB3Q9H5J0 574 aa7.65□□□□□ -1.18
NF1-215ENST00000493220 TOMM22Q9NS69 142 aa7.65□□□□□ -1.18
NF1-215ENST00000493220 VPS72Q15906 364 aa7.65□□□□□ -1.19
NF1-215ENST00000493220 WASHC4Q2M389 1173 aa7.65□□□□□ -1.19
NF1-215ENST00000493220 SOS2Q07890 1332 aaPredicted RBP7.65□□□□□ -1.19
NF1-215ENST00000493220 PARP10Q53GL7 1025 aa7.65□□□□□ -1.19
NF1-215ENST00000493220 SEPT12Q8IYM1 358 aa7.65□□□□□ -1.19
NF1-215ENST00000493220 CHPF2Q9P2E5 772 aa7.65□□□□□ -1.19
NF1-215ENST00000493220 POLR1AO95602 1720 aaPredicted RBP7.65□□□□□ -1.19
NF1-215ENST00000493220 REC8O95072 547 aa7.64□□□□□ -1.19
NF1-215ENST00000493220 TPTE2Q6XPS3 522 aa7.64□□□□□ -1.19
NF1-215ENST00000493220 USP32Q8NFA0 1604 aa7.64□□□□□ -1.19
NF1-215ENST00000493220 IFIT1P09914 478 aaKnown RBP7.64□□□□□ -1.19
NF1-215ENST00000493220 SLC5A1P13866 664 aa7.64□□□□□ -1.19
NF1-215ENST00000493220 GNL2Q13823 731 aaKnown RBP7.64□□□□□ -1.19
NF1-215ENST00000493220 KSR2Q6VAB6 950 aa7.64□□□□□ -1.19
NF1-215ENST00000493220 FBXO41Q8TF61 875 aa7.64□□□□□ -1.19
NF1-215ENST00000493220 CTDP1Q9Y5B0 961 aaPredicted RBP7.64□□□□□ -1.19
NF1-215ENST00000493220 SRGAP3O43295 1099 aa7.64□□□□□ -1.19
NF1-215ENST00000493220 SYNE3Q6ZMZ3 975 aa7.64□□□□□ -1.19
NF1-215ENST00000493220 SSH1Q8WYL5 1049 aa7.64□□□□□ -1.19
NF1-215ENST00000493220 INTS3Q68E01 1043 aaKnown RBP7.64□□□□□ -1.19
NF1-215ENST00000493220 ANKIB1Q9P2G1 1089 aa7.64□□□□□ -1.19
NF1-215ENST00000493220 LRRC7Q96NW7 1537 aa7.64□□□□□ -1.19
NF1-215ENST00000493220 ARHGEF28Q8N1W1 1705 aaKnown RBP7.64□□□□□ -1.19
NF1-215ENST00000493220 SIGLEC1Q9BZZ2 1709 aa7.64□□□□□ -1.19
NF1-215ENST00000493220 METTL24Q5JXM2 366 aa7.63□□□□□ -1.19
NF1-215ENST00000493220 XAGE3Q8WTP9 111 aa7.63□□□□□ -1.19
NF1-215ENST00000493220 RBM17Q96I25 401 aaKnown RBP7.63□□□□□ -1.19
NF1-215ENST00000493220 PSMD1Q99460 953 aa7.63□□□□□ -1.19
NF1-215ENST00000493220 KIF3AQ9Y496 699 aa7.63□□□□□ -1.19
NF1-215ENST00000493220 APPP05067 770 aa7.63□□□□□ -1.19
NF1-215ENST00000493220 SLF2Q8IX21 1173 aa7.63□□□□□ -1.19
NF1-215ENST00000493220 PHACTR3Q96KR7 559 aa7.63□□□□□ -1.19
NF1-215ENST00000493220 TRDNQ13061 729 aa7.63□□□□□ -1.19
NF1-215ENST00000493220 GJD4Q96KN9 370 aaPredicted RBP7.63□□□□□ -1.19
NF1-215ENST00000493220 NIP7Q9Y221 180 aaKnown RBP eCLIP7.63□□□□□ -1.19
NF1-215ENST00000493220 KNDC1Q76NI1 1749 aa7.63□□□□□ -1.19
NF1-215ENST00000493220 USP19O94966 1318 aa7.63□□□□□ -1.19
NF1-215ENST00000493220 ERBB4Q15303 1308 aa7.63□□□□□ -1.19
NF1-215ENST00000493220 ZKSCAN1P17029 563 aaPredicted RBP7.63□□□□□ -1.19
NF1-215ENST00000493220 NLRP3Q96P20 1036 aa7.63□□□□□ -1.19
NF1-215ENST00000493220 ERICH2A1L162 156 aa7.62□□□□□ -1.19
NF1-215ENST00000493220 GPTP24298 496 aa7.62□□□□□ -1.19
NF1-215ENST00000493220 ZRSR1Q15695 479 aaKnown RBP7.62□□□□□ -1.19
NF1-215ENST00000493220 ZNF622Q969S3 477 aaKnown RBP eCLIP7.62□□□□□ -1.196e-7■□□□□ 8.1
NF1-215ENST00000493220 FSD1Q9BTV5 496 aa7.62□□□□□ -1.19
NF1-215ENST00000493220 COPS6Q7L5N1 327 aa7.62□□□□□ -1.19
NF1-215ENST00000493220 TMEM57Q8N5G2 664 aa7.62□□□□□ -1.19
NF1-215ENST00000493220 PLBD2Q8NHP8 589 aa7.62□□□□□ -1.19
NF1-215ENST00000493220 DDX21Q9NR30 783 aaKnown RBP eCLIP7.62□□□□□ -1.19
NF1-215ENST00000493220 ST18O60284 1047 aa7.62□□□□□ -1.19
NF1-215ENST00000493220 BARGINQ6ZT62 677 aa7.61□□□□□ -1.19
NF1-215ENST00000493220 DNAJC2Q99543 621 aaKnown RBP7.61□□□□□ -1.19
NF1-215ENST00000493220 SIL1Q9H173 461 aa7.61□□□□□ -1.19
NF1-215ENST00000493220 TMOD2Q9NZR1 351 aa7.61□□□□□ -1.19
NF1-215ENST00000493220 MRPL50Q8N5N7 158 aaKnown RBP7.61□□□□□ -1.19
NF1-215ENST00000493220 KIF1BPQ96EK5 621 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms