RNA–Protein interactions for RNA: ENST00000493199.1

NEK4-205, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 355 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-205ENST00000493199 LOC102724428A0A0B4J2F2 783 aa6.75□□□□□ -1.33
NEK4-205ENST00000493199 PSDA5PKW4 1024 aaPredicted RBP6.75□□□□□ -1.33
NEK4-205ENST00000493199 VAMP4O75379 141 aa6.75□□□□□ -1.33
NEK4-205ENST00000493199 TRIM37O94972 964 aa6.75□□□□□ -1.33
NEK4-205ENST00000493199 SIK1P57059 783 aa6.75□□□□□ -1.33
NEK4-205ENST00000493199 SLC39A6Q13433 755 aa6.75□□□□□ -1.33
NEK4-205ENST00000493199 FKBP5Q13451 457 aaPredicted RBP6.75□□□□□ -1.33
NEK4-205ENST00000493199 PDE3AQ14432 1141 aa6.75□□□□□ -1.33
NEK4-205ENST00000493199 RC3H1Q5TC82 1133 aaKnown RBP6.75□□□□□ -1.33
NEK4-205ENST00000493199 AK7Q96M32 723 aa6.75□□□□□ -1.33
NEK4-205ENST00000493199 DDX21Q9NR30 783 aaKnown RBP eCLIP6.75□□□□□ -1.33
NEK4-205ENST00000493199 ATG3Q9NT62 314 aa6.75□□□□□ -1.33
NEK4-205ENST00000493199 CCNL1Q9UK58 526 aaPredicted RBP6.75□□□□□ -1.33
NEK4-205ENST00000493199 RTCBQ9Y3I0 505 aaKnown RBP6.75□□□□□ -1.33
NEK4-205ENST00000493199 WNK3Q9BYP7 1800 aa6.75□□□□□ -1.33
NEK4-205ENST00000493199 ZPR1O75312 459 aa6.74□□□□□ -1.33
NEK4-205ENST00000493199 IL6STP40189 918 aaPredicted RBP6.74□□□□□ -1.33
NEK4-205ENST00000493199 CCT4P50991 539 aaKnown RBP6.74□□□□□ -1.33
NEK4-205ENST00000493199 RARSP54136 660 aaKnown RBP6.74□□□□□ -1.33
NEK4-205ENST00000493199 EN1Q05925 392 aaPredicted RBP6.74□□□□□ -1.33
NEK4-205ENST00000493199 RIC3Q7Z5B4 369 aa6.74□□□□□ -1.33
NEK4-205ENST00000493199 C8orf58Q8NAV2 365 aa6.74□□□□□ -1.33
NEK4-205ENST00000493199 ZNF496Q96IT1 587 aaPredicted RBP6.74□□□□□ -1.33
NEK4-205ENST00000493199 ASAP1Q9ULH1 1129 aa6.74□□□□□ -1.33
NEK4-205ENST00000493199 LRRC37A3O60309 1634 aa6.74□□□□□ -1.33
NEK4-205ENST00000493199 KDM6AO15550 1401 aaPredicted RBP6.74□□□□□ -1.33
NEK4-205ENST00000493199 THSD7AQ9UPZ6 1657 aa6.74□□□□□ -1.33
NEK4-205ENST00000493199 MRC1P22897 1456 aa6.73□□□□□ -1.33
NEK4-205ENST00000493199 TNS1Q9HBL0 1735 aaKnown RBP6.73□□□□□ -1.33
NEK4-205ENST00000493199 RGL2O15211 777 aa6.73□□□□□ -1.33
NEK4-205ENST00000493199 NPHP1O15259 732 aa6.73□□□□□ -1.33
NEK4-205ENST00000493199 TRAPPC3LQ5T215 181 aa6.73□□□□□ -1.33
NEK4-205ENST00000493199 ATF7IPQ6VMQ6 1270 aa6.73□□□□□ -1.33
NEK4-205ENST00000493199 ANKRD13DQ6ZTN6 518 aa6.73□□□□□ -1.33
NEK4-205ENST00000493199 DZIP1LQ8IYY4 767 aaKnown RBP6.73□□□□□ -1.33
NEK4-205ENST00000493199 CCDC87Q9NVE4 849 aa6.73□□□□□ -1.33
NEK4-205ENST00000493199 ZBTB47Q9UFB7 747 aaPredicted RBP6.73□□□□□ -1.33
NEK4-205ENST00000493199 DDX19BQ9UMR2 479 aa6.73□□□□□ -1.33
NEK4-205ENST00000493199 ZNF330Q9Y3S2 320 aaPredicted RBP6.73□□□□□ -1.33
NEK4-205ENST00000493199 SUPT16HQ9Y5B9 1047 aaKnown RBP6.73□□□□□ -1.33
NEK4-205ENST00000493199 KCNQ2O43526 872 aa6.72□□□□□ -1.33
NEK4-205ENST00000493199 GNAI3P08754 354 aa6.72□□□□□ -1.33
NEK4-205ENST00000493199 MYL6BP14649 208 aa6.72□□□□□ -1.33
NEK4-205ENST00000493199 RFC4P35249 363 aa6.72□□□□□ -1.33
NEK4-205ENST00000493199 FLIIQ13045 1269 aa6.72□□□□□ -1.33
NEK4-205ENST00000493199 R3HDM1Q15032 1099 aaKnown RBP6.72□□□□□ -1.33
NEK4-205ENST00000493199 PELP1Q8IZL8 1130 aaKnown RBP6.72□□□□□ -1.33
NEK4-205ENST00000493199 SSH1Q8WYL5 1049 aa6.72□□□□□ -1.33
NEK4-205ENST00000493199 CAMKK2Q96RR4 588 aa6.72□□□□□ -1.33
NEK4-205ENST00000493199 STK32BQ9NY57 414 aa6.72□□□□□ -1.33
NEK4-205ENST00000493199 CACNA1FO60840 1977 aa6.71□□□□□ -1.33
NEK4-205ENST00000493199 ADAMTS7Q9UKP4 1686 aa6.71□□□□□ -1.33
NEK4-205ENST00000493199 ERVV-1B6SEH8 477 aa6.71□□□□□ -1.34
NEK4-205ENST00000493199 RPS6KA4O75676 772 aa6.71□□□□□ -1.34
NEK4-205ENST00000493199 SSFA2P28290 1259 aa6.71□□□□□ -1.34
NEK4-205ENST00000493199 GTF2E1P29083 439 aaPredicted RBP6.71□□□□□ -1.34
NEK4-205ENST00000493199 RRP1P56182 461 aaKnown RBP6.71□□□□□ -1.34
NEK4-205ENST00000493199 AIMP1Q12904 312 aaKnown RBP6.71□□□□□ -1.34
NEK4-205ENST00000493199 EZH2Q15910 746 aaKnown RBP6.71□□□□□ -1.34
NEK4-205ENST00000493199 TXNRD1Q16881 649 aa6.71□□□□□ -1.34
NEK4-205ENST00000493199 FAM182BQ5T319 152 aa6.71□□□□□ -1.34
NEK4-205ENST00000493199 CLEC4GQ6UXB4 293 aa6.71□□□□□ -1.34
NEK4-205ENST00000493199 KSR2Q6VAB6 950 aa6.71□□□□□ -1.34
NEK4-205ENST00000493199 PLBD2Q8NHP8 589 aa6.71□□□□□ -1.34
NEK4-205ENST00000493199 NECTIN2Q92692 538 aa6.71□□□□□ -1.34
NEK4-205ENST00000493199 SRCIN1Q9C0H9 1055 aa6.71□□□□□ -1.34
NEK4-205ENST00000493199 SPINK5Q9NQ38 1064 aaPredicted RBP6.71□□□□□ -1.34
NEK4-205ENST00000493199 C9orf78Q9NZ63 289 aaPredicted RBP6.71□□□□□ -1.34
NEK4-205ENST00000493199 TFCP2L1Q9NZI6 479 aa6.71□□□□□ -1.34
NEK4-205ENST00000493199 NOB1Q9ULX3 412 aaKnown RBP6.71□□□□□ -1.34
NEK4-205ENST00000493199 USP16Q9Y5T5 823 aa6.71□□□□□ -1.34
NEK4-205ENST00000493199 CNTNAP4Q9C0A0 1308 aa6.71□□□□□ -1.34
NEK4-205ENST00000493199 HMMRO75330 724 aa6.7□□□□□ -1.34
NEK4-205ENST00000493199 ALDH1L1O75891 902 aa6.7□□□□□ -1.34
NEK4-205ENST00000493199 CYP19A1P11511 503 aaPredicted RBP6.7□□□□□ -1.34
NEK4-205ENST00000493199 CRKLP46109 303 aaKnown RBP6.7□□□□□ -1.34
NEK4-205ENST00000493199 PARP10Q53GL7 1025 aa6.7□□□□□ -1.34
NEK4-205ENST00000493199 SLC4A10Q6U841 1118 aa6.7□□□□□ -1.34
NEK4-205ENST00000493199 COPS6Q7L5N1 327 aa6.7□□□□□ -1.34
NEK4-205ENST00000493199 PPP1R42Q7Z4L9 355 aa6.7□□□□□ -1.34
NEK4-205ENST00000493199 DZIP3Q86Y13 1208 aaKnown RBP6.7□□□□□ -1.34
NEK4-205ENST00000493199 DNAJC10Q8IXB1 793 aa6.7□□□□□ -1.34
NEK4-205ENST00000493199 NLGN1Q8N2Q7 840 aa6.7□□□□□ -1.34
NEK4-205ENST00000493199 MRPL50Q8N5N7 158 aaKnown RBP6.7□□□□□ -1.34
NEK4-205ENST00000493199 TSPYL6Q8N831 410 aa6.7□□□□□ -1.34
NEK4-205ENST00000493199 DNAAF4Q8WXU2 420 aa6.7□□□□□ -1.34
NEK4-205ENST00000493199 NYXQ9GZU5 481 aa6.7□□□□□ -1.34
NEK4-205ENST00000493199 CHPF2Q9P2E5 772 aa6.7□□□□□ -1.34
NEK4-205ENST00000493199 NHSQ6T4R5 1651 aa6.7□□□□□ -1.34
NEK4-205ENST00000493199 DOT1LQ8TEK3 1739 aa6.7□□□□□ -1.34
NEK4-205ENST00000493199 ITGB4P16144 1822 aa6.69□□□□□ -1.34
NEK4-205ENST00000493199 RREB1Q92766 1687 aa6.69□□□□□ -1.34
NEK4-205ENST00000493199 GNPATO15228 680 aa6.69□□□□□ -1.34
NEK4-205ENST00000493199 KCNQ3O43525 872 aa6.69□□□□□ -1.34
NEK4-205ENST00000493199 BCAR3O75815 825 aa6.69□□□□□ -1.34
NEK4-205ENST00000493199 ITPRIPQ8IWB1 547 aa6.69□□□□□ -1.34
NEK4-205ENST00000493199 LINS1Q8NG48 757 aa6.69□□□□□ -1.34
NEK4-205ENST00000493199 SLC16A10Q8TF71 515 aa6.69□□□□□ -1.34
NEK4-205ENST00000493199 BCL2L13Q9BXK5 485 aa6.69□□□□□ -1.34
NEK4-205ENST00000493199 TMX4Q9H1E5 349 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms