RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 U2AF1L5P0DN76 240 aaPredicted RBP24.74■■□□□ 1.55
CHD1L-209ENST00000492728 KCNA3P22001 575 aa24.74■■□□□ 1.55
CHD1L-209ENST00000492728 TM4SF1P30408 202 aa24.74■■□□□ 1.55
CHD1L-209ENST00000492728 C1QTNF8P60827 252 aa24.74■■□□□ 1.55
CHD1L-209ENST00000492728 U2AF1Q01081 240 aaKnown RBP eCLIP24.74■■□□□ 1.55
CHD1L-209ENST00000492728 TEFQ10587 303 aa24.74■■□□□ 1.55
CHD1L-209ENST00000492728 ZNF790Q6PG37 636 aa24.74■■□□□ 1.55
CHD1L-209ENST00000492728 TTC5Q8N0Z6 440 aa24.74■■□□□ 1.55
CHD1L-209ENST00000492728 HEG1Q9ULI3 1381 aa24.74■■□□□ 1.55
CHD1L-209ENST00000492728 KCNQ3O43525 872 aa24.73■■□□□ 1.55
CHD1L-209ENST00000492728 NARFQ9UHQ1 456 aa24.72■■□□□ 1.55
CHD1L-209ENST00000492728 BCS1LQ9Y276 419 aa24.72■■□□□ 1.55
CHD1L-209ENST00000492728 ZPR1O75312 459 aa24.71■■□□□ 1.55
CHD1L-209ENST00000492728 GIGYF1O75420 1035 aaPredicted RBP24.71■■□□□ 1.55
CHD1L-209ENST00000492728 CANXP27824 592 aaKnown RBP24.71■■□□□ 1.55
CHD1L-209ENST00000492728 NUDCQ9Y266 331 aa24.71■■□□□ 1.55
CHD1L-209ENST00000492728 NRXN2Q9P2S2 1712 aa24.7■■□□□ 1.54
CHD1L-209ENST00000492728 NFIXQ14938 502 aa24.7■■□□□ 1.54
CHD1L-209ENST00000492728 EIF5P55010 431 aaKnown RBP24.69■■□□□ 1.54
CHD1L-209ENST00000492728 AFDNP55196 1824 aaKnown RBP24.69■■□□□ 1.54
CHD1L-209ENST00000492728 SCN7AQ01118 1682 aa24.69■■□□□ 1.54
CHD1L-209ENST00000492728 CHRNA5P30532 468 aa24.68■■□□□ 1.54
CHD1L-209ENST00000492728 MCM10Q7L590 875 aa24.68■■□□□ 1.54
CHD1L-209ENST00000492728 FCHSD2O94868 740 aa24.67■■□□□ 1.54
CHD1L-209ENST00000492728 DCTN1Q14203 1278 aa24.67■■□□□ 1.54
CHD1L-209ENST00000492728 ZNF526Q8TF50 670 aaPredicted RBP24.67■■□□□ 1.54
CHD1L-209ENST00000492728 STARD3NLO95772 234 aa24.66■■□□□ 1.54
CHD1L-209ENST00000492728 CARMIL3Q8ND23 1372 aa24.66■■□□□ 1.54
CHD1L-209ENST00000492728 PRAMEF22A3QJZ6 481 aa24.65■■□□□ 1.54
CHD1L-209ENST00000492728 BTBD11A6QL63 1104 aa24.65■■□□□ 1.54
CHD1L-209ENST00000492728 FMNL2Q96PY5 1086 aa24.65■■□□□ 1.54
CHD1L-209ENST00000492728 ARFGEF1Q9Y6D6 1849 aa24.65■■□□□ 1.54
CHD1L-209ENST00000492728 A1BGP04217 495 aa24.64■■□□□ 1.54
CHD1L-209ENST00000492728 GPBP1L1Q9HC44 474 aaPredicted RBP24.62■■□□□ 1.53
CHD1L-209ENST00000492728 SENP3-EIF4A1A0A087X0R7 540 aa24.61■■□□□ 1.53
CHD1L-209ENST00000492728 PIP4K2AP48426 406 aaPredicted RBP24.61■■□□□ 1.53
CHD1L-209ENST00000492728 ARHGAP27Q6ZUM4 889 aa24.61■■□□□ 1.53
CHD1L-209ENST00000492728 PIM2Q9P1W9 311 aa24.61■■□□□ 1.53
CHD1L-209ENST00000492728 SERPINB2P05120 415 aa24.6■■□□□ 1.53
CHD1L-209ENST00000492728 TBC1D9BQ66K14 1250 aa24.6■■□□□ 1.53
CHD1L-209ENST00000492728 TEX13AQ9BXU3 409 aaPredicted RBP24.6■■□□□ 1.53
CHD1L-209ENST00000492728 TBC1D2BQ9UPU7 963 aa24.6■■□□□ 1.53
CHD1L-209ENST00000492728 ZNF330Q9Y3S2 320 aaPredicted RBP24.6■■□□□ 1.53
CHD1L-209ENST00000492728 USP16Q9Y5T5 823 aa24.6■■□□□ 1.53
CHD1L-209ENST00000492728 DLEC1Q9Y238 1755 aa24.59■■□□□ 1.53
CHD1L-209ENST00000492728 IL6STP40189 918 aaPredicted RBP24.59■■□□□ 1.53
CHD1L-209ENST00000492728 BICDL1Q6ZP65 573 aa24.59■■□□□ 1.53
CHD1L-209ENST00000492728 RTF1Q92541 710 aaKnown RBP24.59■■□□□ 1.53
CHD1L-209ENST00000492728 PLEKHF1Q96S99 279 aa24.59■■□□□ 1.53
CHD1L-209ENST00000492728 BCORQ6W2J9 1755 aa24.59■■□□□ 1.53
CHD1L-209ENST00000492728 A0A087WZG4 1122 aa24.58■■□□□ 1.53
CHD1L-209ENST00000492728 DALRD3Q5D0E6 543 aaKnown RBP24.58■■□□□ 1.53
CHD1L-209ENST00000492728 DLG5Q8TDM6 1919 aa24.58■■□□□ 1.53
CHD1L-209ENST00000492728 CAMTA2O94983 1202 aa24.57■■□□□ 1.52
CHD1L-209ENST00000492728 ANKRD31Q8N7Z5 1873 aa24.57■■□□□ 1.52
CHD1L-209ENST00000492728 HTATSF1O43719 755 aaKnown RBP24.56■■□□□ 1.52
CHD1L-209ENST00000492728 KIF3CO14782 793 aa24.55■■□□□ 1.52
CHD1L-209ENST00000492728 KDM3BQ7LBC6 1761 aa24.54■■□□□ 1.52
CHD1L-209ENST00000492728 MIS18AQ9NYP9 233 aa24.54■■□□□ 1.52
CHD1L-209ENST00000492728 COL11A2P13942 1736 aaPredicted RBP24.54■■□□□ 1.52
CHD1L-209ENST00000492728 C9orf131Q5VYM1 1079 aa24.53■■□□□ 1.52
CHD1L-209ENST00000492728 CCDC24Q8N4L8 307 aa24.53■■□□□ 1.52
CHD1L-209ENST00000492728 THUMPD2Q9BTF0 503 aaKnown RBP24.53■■□□□ 1.52
CHD1L-209ENST00000492728 CEP350Q5VT06 3117 aa24.53■■□□□ 1.52
CHD1L-209ENST00000492728 NBPF26B4DH59 902 aa24.52■■□□□ 1.52
CHD1L-209ENST00000492728 SNRPA1P09661 255 aaKnown RBP24.52■■□□□ 1.52
CHD1L-209ENST00000492728 NBPF10Q6P3W6 841 aaKnown RBP24.52■■□□□ 1.52
CHD1L-209ENST00000492728 NBPF15Q8N660 670 aa24.52■■□□□ 1.52
CHD1L-209ENST00000492728 PRR5LQ6MZQ0 368 aa24.51■■□□□ 1.51
CHD1L-209ENST00000492728 DZIP3Q86Y13 1208 aaKnown RBP24.51■■□□□ 1.51
CHD1L-209ENST00000492728 LAMB4A4D0S4 1761 aa24.51■■□□□ 1.51
CHD1L-209ENST00000492728 RASSF7Q02833 373 aa24.5■■□□□ 1.51
CHD1L-209ENST00000492728 TAF7Q15545 349 aaPredicted RBP24.5■■□□□ 1.51
CHD1L-209ENST00000492728 NFE2L2Q16236 605 aa24.5■■□□□ 1.51
CHD1L-209ENST00000492728 C2CD5Q86YS7 1000 aa24.5■■□□□ 1.51
CHD1L-209ENST00000492728 PRELPP51888 382 aa24.49■■□□□ 1.51
CHD1L-209ENST00000492728 DDX10Q13206 875 aaKnown RBP24.48■■□□□ 1.51
CHD1L-209ENST00000492728 SBF1O95248 1867 aa24.47■■□□□ 1.51
CHD1L-209ENST00000492728 NMRK2Q9NPI5 230 aa24.47■■□□□ 1.51
CHD1L-209ENST00000492728 RNF181Q9P0P0 153 aa24.47■■□□□ 1.51
CHD1L-209ENST00000492728 RALBP1Q15311 655 aa24.45■■□□□ 1.5
CHD1L-209ENST00000492728 TTLL6Q8N841 843 aa24.45■■□□□ 1.5
CHD1L-209ENST00000492728 BRIP1Q9BX63 1249 aa24.45■■□□□ 1.5
CHD1L-209ENST00000492728 H0YIN7 160 aa24.44■■□□□ 1.5
CHD1L-209ENST00000492728 SETDB2Q96T68 719 aa24.44■■□□□ 1.5
CHD1L-209ENST00000492728 MAPK8IP3Q9UPT6 1336 aa24.43■■□□□ 1.5
CHD1L-209ENST00000492728 NEFMP07197 916 aa24.43■■□□□ 1.5
CHD1L-209ENST00000492728 EIF4A1P60842 406 aaKnown RBP24.43■■□□□ 1.5
CHD1L-209ENST00000492728 NPM2Q86SE8 214 aaKnown RBP24.43■■□□□ 1.5
CHD1L-209ENST00000492728 CNBD1Q8NA66 436 aa24.43■■□□□ 1.5
CHD1L-209ENST00000492728 NFKBIEO00221 500 aa24.42■■□□□ 1.5
CHD1L-209ENST00000492728 HLFQ16534 295 aa24.4■■□□□ 1.5
CHD1L-209ENST00000492728 CLEC4GQ6UXB4 293 aa24.4■■□□□ 1.5
CHD1L-209ENST00000492728 PNISRQ8TF01 805 aaKnown RBP24.4■■□□□ 1.5
CHD1L-209ENST00000492728 ZNF622Q969S3 477 aaKnown RBP eCLIP24.4■■□□□ 1.5
CHD1L-209ENST00000492728 MYBBP1AQ9BQG0 1328 aaKnown RBP24.39■■□□□ 1.5
CHD1L-209ENST00000492728 HSPA6P17066 643 aa24.39■■□□□ 1.49
CHD1L-209ENST00000492728 PDE6BP35913 854 aa24.39■■□□□ 1.49
CHD1L-209ENST00000492728 TIAM2Q8IVF5 1701 aa24.38■■□□□ 1.49
CHD1L-209ENST00000492728 ST5P78524 1137 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms