RNA–Protein interactions for RNA: ENST00000492692.1

CSMD3-206, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 1,830 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-206ENST00000492692 ACTN2P35609 894 aa13.16□□□□□ -0.3
CSMD3-206ENST00000492692 PDCD2Q16342 344 aaPredicted RBP13.16□□□□□ -0.3
CSMD3-206ENST00000492692 TEX11Q8IYF3 940 aa13.16□□□□□ -0.3
CSMD3-206ENST00000492692 EIF3CQ99613 913 aaKnown RBP13.16□□□□□ -0.3
CSMD3-206ENST00000492692 NUB1Q9Y5A7 615 aa13.16□□□□□ -0.3
CSMD3-206ENST00000492692 ATP10AO60312 1499 aa13.15□□□□□ -0.3
CSMD3-206ENST00000492692 ABCD1P33897 745 aa13.15□□□□□ -0.3
CSMD3-206ENST00000492692 MCTP1Q6DN14 999 aa13.15□□□□□ -0.3
CSMD3-206ENST00000492692 CCDC26Q8TAB7 109 aa13.15□□□□□ -0.3
CSMD3-206ENST00000492692 GNL3LQ9NVN8 582 aaKnown RBP13.15□□□□□ -0.3
CSMD3-206ENST00000492692 TMEM63CQ9P1W3 806 aa13.15□□□□□ -0.3
CSMD3-206ENST00000492692 SYCE3A1L190 88 aa13.14□□□□□ -0.31
CSMD3-206ENST00000492692 TMCO5BA8MYB1 307 aa13.14□□□□□ -0.31
CSMD3-206ENST00000492692 SMARCE1Q969G3 411 aa13.14□□□□□ -0.31
CSMD3-206ENST00000492692 CCDC97Q96F63 343 aaPredicted RBP13.14□□□□□ -0.31
CSMD3-206ENST00000492692 FAM107BQ9H098 131 aa13.14□□□□□ -0.31
CSMD3-206ENST00000492692 TMX4Q9H1E5 349 aaPredicted RBP13.14□□□□□ -0.31
CSMD3-206ENST00000492692 IQGAP1P46940 1657 aa13.14□□□□□ -0.31
CSMD3-206ENST00000492692 MAGI2Q86UL8 1455 aa13.13□□□□□ -0.31
CSMD3-206ENST00000492692 CAND2O75155 1236 aa13.13□□□□□ -0.31
CSMD3-206ENST00000492692 SCP2P22307 547 aa13.13□□□□□ -0.31
CSMD3-206ENST00000492692 MYBPC2Q14324 1141 aa13.13□□□□□ -0.31
CSMD3-206ENST00000492692 NAIF1Q69YI7 327 aaPredicted RBP13.13□□□□□ -0.31
CSMD3-206ENST00000492692 LEKR1Q6ZMV7 388 aa13.13□□□□□ -0.31
CSMD3-206ENST00000492692 DNAAF4Q8WXU2 420 aa13.13□□□□□ -0.31
CSMD3-206ENST00000492692 IRAK4Q9NWZ3 460 aa13.13□□□□□ -0.31
CSMD3-206ENST00000492692 MKRN1Q9UHC7 482 aaKnown RBP13.13□□□□□ -0.31
CSMD3-206ENST00000492692 PYCARDQ9ULZ3 195 aa13.13□□□□□ -0.31
CSMD3-206ENST00000492692 ADCY5O95622 1261 aa13.13□□□□□ -0.31
CSMD3-206ENST00000492692 TSPY4P0CV99 314 aa13.13□□□□□ -0.31
CSMD3-206ENST00000492692 TSPY10P0CW01 314 aa13.13□□□□□ -0.31
CSMD3-206ENST00000492692 PNMA6AP0CW24 399 aaPredicted RBP13.13□□□□□ -0.31
CSMD3-206ENST00000492692 CRYMQ14894 314 aa13.13□□□□□ -0.31
CSMD3-206ENST00000492692 SLC5A9Q2M3M2 681 aa13.13□□□□□ -0.31
CSMD3-206ENST00000492692 TTC19Q6DKK2 380 aaPredicted RBP13.13□□□□□ -0.31
CSMD3-206ENST00000492692 TTLL5Q6EMB2 1281 aa13.13□□□□□ -0.31
CSMD3-206ENST00000492692 EXOC8Q8IYI6 725 aa13.13□□□□□ -0.31
CSMD3-206ENST00000492692 SDR16C5Q8N3Y7 309 aa13.13□□□□□ -0.31
CSMD3-206ENST00000492692 KIF2CQ99661 725 aa13.13□□□□□ -0.31
CSMD3-206ENST00000492692 IL16Q14005 1332 aa13.12□□□□□ -0.31
CSMD3-206ENST00000492692 A0A087WUV0 522 aaPredicted RBP13.12□□□□□ -0.31
CSMD3-206ENST00000492692 FAM163BP0C2L3 166 aa13.12□□□□□ -0.31
CSMD3-206ENST00000492692 GCFC2P16383 781 aaKnown RBP13.12□□□□□ -0.31
CSMD3-206ENST00000492692 DDX46Q7L014 1031 aaKnown RBP13.12□□□□□ -0.31
CSMD3-206ENST00000492692 ERC1Q8IUD2 1116 aa13.12□□□□□ -0.31
CSMD3-206ENST00000492692 GIMAP7Q8NHV1 300 aa13.12□□□□□ -0.31
CSMD3-206ENST00000492692 KCNF1Q9H3M0 494 aa13.12□□□□□ -0.31
CSMD3-206ENST00000492692 TBC1D2BQ9UPU7 963 aa13.12□□□□□ -0.31
CSMD3-206ENST00000492692 MAST1Q9Y2H9 1570 aa13.12□□□□□ -0.31
CSMD3-206ENST00000492692 ZRANB2O95218 330 aaKnown RBP eCLIP13.11□□□□□ -0.31
CSMD3-206ENST00000492692 ELF1P32519 619 aa13.11□□□□□ -0.31
CSMD3-206ENST00000492692 TBC1D8BQ0IIM8 1120 aa13.11□□□□□ -0.31
CSMD3-206ENST00000492692 MMTAG2Q9BU76 263 aaKnown RBP13.11□□□□□ -0.31
CSMD3-206ENST00000492692 VEZTQ9HBM0 779 aa13.11□□□□□ -0.31
CSMD3-206ENST00000492692 IQGAP3Q86VI3 1631 aa13.11□□□□□ -0.31
CSMD3-206ENST00000492692 NEDD9Q14511 834 aa13.11□□□□□ -0.31
CSMD3-206ENST00000492692 CDC37Q16543 378 aaPredicted RBP13.11□□□□□ -0.31
CSMD3-206ENST00000492692 RBM27Q9P2N5 1060 aaKnown RBP13.11□□□□□ -0.31
CSMD3-206ENST00000492692 NEBLO76041 1014 aa13.1□□□□□ -0.31
CSMD3-206ENST00000492692 CHMLP26374 656 aa13.1□□□□□ -0.31
CSMD3-206ENST00000492692 AMOTQ4VCS5 1084 aa13.1□□□□□ -0.31
CSMD3-206ENST00000492692 TADA2BQ86TJ2 420 aa13.1□□□□□ -0.31
CSMD3-206ENST00000492692 LARP6Q9BRS8 491 aaKnown RBP13.1□□□□□ -0.31
CSMD3-206ENST00000492692 CPSF2Q9P2I0 782 aaKnown RBP13.1□□□□□ -0.31
CSMD3-206ENST00000492692 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.1□□□□□ -0.31
CSMD3-206ENST00000492692 ZBTB7CA1YPR0 619 aa13.09□□□□□ -0.31
CSMD3-206ENST00000492692 BCAR3O75815 825 aa13.09□□□□□ -0.31
CSMD3-206ENST00000492692 MYBL2P10244 700 aa13.09□□□□□ -0.31
CSMD3-206ENST00000492692 RBBP5Q15291 538 aaKnown RBP13.09□□□□□ -0.31
CSMD3-206ENST00000492692 TRIM74Q86UV6 250 aa13.09□□□□□ -0.31
CSMD3-206ENST00000492692 TRIM73Q86UV7 250 aa13.09□□□□□ -0.31
CSMD3-206ENST00000492692 DRAXINQ8NBI3 349 aaPredicted RBP13.09□□□□□ -0.31
CSMD3-206ENST00000492692 GTF3C6Q969F1 213 aa13.09□□□□□ -0.31
CSMD3-206ENST00000492692 TRIM6Q9C030 488 aaPredicted RBP13.09□□□□□ -0.31
CSMD3-206ENST00000492692 RWDD1Q9H446 243 aaPredicted RBP13.09□□□□□ -0.31
CSMD3-206ENST00000492692 SOS1Q07889 1333 aaPredicted RBP13.09□□□□□ -0.31
CSMD3-206ENST00000492692 PLA2R1Q13018 1463 aa13.09□□□□□ -0.31
CSMD3-206ENST00000492692 POLD1P28340 1107 aa13.09□□□□□ -0.31
CSMD3-206ENST00000492692 RPS6KA3P51812 740 aa13.09□□□□□ -0.31
CSMD3-206ENST00000492692 ST5P78524 1137 aa13.09□□□□□ -0.31
CSMD3-206ENST00000492692 SF3A1Q15459 793 aaKnown RBP13.09□□□□□ -0.31
CSMD3-206ENST00000492692 REXO1L1PQ8IX06 675 aa13.09□□□□□ -0.31
CSMD3-206ENST00000492692 RNF214Q8ND24 703 aa13.09□□□□□ -0.31
CSMD3-206ENST00000492692 ZNF483Q8TF39 744 aaPredicted RBP13.09□□□□□ -0.31
CSMD3-206ENST00000492692 UTP14AQ9BVJ6 771 aaKnown RBP13.09□□□□□ -0.31
CSMD3-206ENST00000492692 RANBP17Q9H2T7 1088 aaKnown RBP13.09□□□□□ -0.31
CSMD3-206ENST00000492692 SPATS2LQ9NUQ6 558 aaKnown RBP13.09□□□□□ -0.31
CSMD3-206ENST00000492692 MCM8Q9UJA3 840 aa13.09□□□□□ -0.31
CSMD3-206ENST00000492692 PDZRN3Q9UPQ7 1066 aa13.09□□□□□ -0.31
CSMD3-206ENST00000492692 ELP1O95163 1332 aa13.08□□□□□ -0.32
CSMD3-206ENST00000492692 KDM4AO75164 1064 aa13.08□□□□□ -0.32
CSMD3-206ENST00000492692 PRPHP41219 470 aa13.08□□□□□ -0.32
CSMD3-206ENST00000492692 EIF5P55010 431 aaKnown RBP13.08□□□□□ -0.32
CSMD3-206ENST00000492692 NAA30Q147X3 362 aaPredicted RBP13.08□□□□□ -0.32
CSMD3-206ENST00000492692 ARMC2Q8NEN0 867 aa13.08□□□□□ -0.32
CSMD3-206ENST00000492692 CHCHD3Q9NX63 227 aaKnown RBP13.08□□□□□ -0.32
CSMD3-206ENST00000492692 MYOM1P52179 1685 aa13.08□□□□□ -0.32
CSMD3-206ENST00000492692 ARID3CA6NKF2 412 aa13.07□□□□□ -0.32
CSMD3-206ENST00000492692 SLU7O95391 586 aaKnown RBP13.07□□□□□ -0.32
CSMD3-206ENST00000492692 HDGFL1Q5TGJ6 251 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms