RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 MKNK1Q9BUB5 465 aa4.63□□□□□ -1.67
SNX13-209ENST00000492626 ZNF211Q13398 564 aaPredicted RBP4.63□□□□□ -1.67
SNX13-209ENST00000492626 CXXC1Q9P0U4 656 aaPredicted RBP4.63□□□□□ -1.67
SNX13-209ENST00000492626 FKBP4Q02790 459 aaKnown RBP eCLIP4.63□□□□□ -1.67
SNX13-209ENST00000492626 TTC16Q8NEE8 873 aa4.63□□□□□ -1.67
SNX13-209ENST00000492626 CAMSAP2Q08AD1 1489 aa4.62□□□□□ -1.67
SNX13-209ENST00000492626 NDUFB5O43674 189 aa4.62□□□□□ -1.67
SNX13-209ENST00000492626 GIGYF1O75420 1035 aaPredicted RBP4.62□□□□□ -1.67
SNX13-209ENST00000492626 SIX5Q8N196 739 aa4.62□□□□□ -1.67
SNX13-209ENST00000492626 ANO2Q9NQ90 1003 aa4.62□□□□□ -1.67
SNX13-209ENST00000492626 NCOA3Q9Y6Q9 1424 aa4.62□□□□□ -1.67
SNX13-209ENST00000492626 GGCXP38435 758 aa4.62□□□□□ -1.67
SNX13-209ENST00000492626 ERFEQ4G0M1 354 aa4.62□□□□□ -1.67
SNX13-209ENST00000492626 ZNF772Q68DY9 489 aaPredicted RBP4.62□□□□□ -1.67
SNX13-209ENST00000492626 PHTF2Q8N3S3 785 aa4.62□□□□□ -1.67
SNX13-209ENST00000492626 WBP1LQ9NX94 342 aa4.62□□□□□ -1.67
SNX13-209ENST00000492626 DCTN4Q9UJW0 460 aa4.62□□□□□ -1.67
SNX13-209ENST00000492626 SFI1A8K8P3 1242 aa4.62□□□□□ -1.67
SNX13-209ENST00000492626 ZPR1O75312 459 aa4.62□□□□□ -1.67
SNX13-209ENST00000492626 POTEEQ6S8J3 1075 aa4.62□□□□□ -1.67
SNX13-209ENST00000492626 IL21Q9HBE4 155 aa4.62□□□□□ -1.67
SNX13-209ENST00000492626 C21orf2O43822 256 aa4.61□□□□□ -1.67
SNX13-209ENST00000492626 EAPPQ56P03 285 aaPredicted RBP4.61□□□□□ -1.67
SNX13-209ENST00000492626 FAM163AQ96GL9 167 aaPredicted RBP4.61□□□□□ -1.67
SNX13-209ENST00000492626 HS3ST6Q96QI5 342 aa4.61□□□□□ -1.67
SNX13-209ENST00000492626 A2ML1A8K2U0 1454 aa4.61□□□□□ -1.67
SNX13-209ENST00000492626 AHDC1Q5TGY3 1603 aaPredicted RBP4.61□□□□□ -1.67
SNX13-209ENST00000492626 UBAP1LF5GYI3 381 aa4.61□□□□□ -1.67
SNX13-209ENST00000492626 ICMTO60725 284 aa4.61□□□□□ -1.67
SNX13-209ENST00000492626 TCF3P15923 654 aa4.61□□□□□ -1.67
SNX13-209ENST00000492626 ZNF16P17020 682 aaPredicted RBP4.61□□□□□ -1.67
SNX13-209ENST00000492626 CLDN10P78369 228 aa4.61□□□□□ -1.67
SNX13-209ENST00000492626 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.61□□□□□ -1.67
SNX13-209ENST00000492626 ST18O60284 1047 aa4.61□□□□□ -1.67
SNX13-209ENST00000492626 FAM13AO94988 1023 aa4.61□□□□□ -1.67
SNX13-209ENST00000492626 ATP2B2Q01814 1243 aa4.61□□□□□ -1.67
SNX13-209ENST00000492626 ALKBH2Q6NS38 261 aa4.61□□□□□ -1.67
SNX13-209ENST00000492626 GTF3C2Q8WUA4 911 aaPredicted RBP4.61□□□□□ -1.67
SNX13-209ENST00000492626 BAP1Q92560 729 aa4.61□□□□□ -1.67
SNX13-209ENST00000492626 BRPF3Q9ULD4 1205 aa4.61□□□□□ -1.67
SNX13-209ENST00000492626 ATAD2Q6PL18 1390 aa4.6□□□□□ -1.67
SNX13-209ENST00000492626 SH3BP5LQ7L8J4 393 aa4.6□□□□□ -1.67
SNX13-209ENST00000492626 FAM160A2Q8N612 972 aaPredicted RBP4.6□□□□□ -1.67
SNX13-209ENST00000492626 MRS2Q9HD23 443 aa4.6□□□□□ -1.67
SNX13-209ENST00000492626 PRDM9Q9NQV7 894 aa4.6□□□□□ -1.67
SNX13-209ENST00000492626 XPCQ01831 940 aaPredicted RBP4.6□□□□□ -1.67
SNX13-209ENST00000492626 PHLDB3Q6NSJ2 640 aa4.6□□□□□ -1.67
SNX13-209ENST00000492626 TRAF7Q6Q0C0 670 aa4.6□□□□□ -1.67
SNX13-209ENST00000492626 KCTD12Q96CX2 325 aaKnown RBP4.6□□□□□ -1.67
SNX13-209ENST00000492626 SPATA31A6Q5VVP1 1343 aa4.6□□□□□ -1.67
SNX13-209ENST00000492626 ATP7AQ04656 1500 aa4.6□□□□□ -1.67
SNX13-209ENST00000492626 DHX9Q08211 1270 aaKnown RBP4.6□□□□□ -1.67
SNX13-209ENST00000492626 VASH1Q7L8A9 365 aaPredicted RBP4.6□□□□□ -1.67
SNX13-209ENST00000492626 ZNF511Q8NB15 262 aa4.6□□□□□ -1.67
SNX13-209ENST00000492626 CCDC85AQ96PX6 553 aaPredicted RBP4.6□□□□□ -1.67
SNX13-209ENST00000492626 CROCC2H7BZ55 1655 aa4.6□□□□□ -1.67
SNX13-209ENST00000492626 CTTNBP2Q8WZ74 1663 aa4.6□□□□□ -1.67
SNX13-209ENST00000492626 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.59□□□□□ -1.67
SNX13-209ENST00000492626 NEURL4Q96JN8 1562 aa4.59□□□□□ -1.67
SNX13-209ENST00000492626 ARID5BQ14865 1188 aa4.59□□□□□ -1.67
SNX13-209ENST00000492626 IQGAP1P46940 1657 aa4.59□□□□□ -1.67
SNX13-209ENST00000492626 GTF2E1P29083 439 aaPredicted RBP4.59□□□□□ -1.67
SNX13-209ENST00000492626 CHIC2Q9UKJ5 165 aa4.59□□□□□ -1.67
SNX13-209ENST00000492626 TLL1O43897 1013 aa4.59□□□□□ -1.68
SNX13-209ENST00000492626 TAS1R3Q7RTX0 852 aa4.59□□□□□ -1.68
SNX13-209ENST00000492626 PPP1R1BQ9UD71 204 aaPredicted RBP4.59□□□□□ -1.68
SNX13-209ENST00000492626 FCF1Q9Y324 198 aaKnown RBP4.59□□□□□ -1.68
SNX13-209ENST00000492626 FOXO3O43524 673 aa4.58□□□□□ -1.68
SNX13-209ENST00000492626 ESCO1Q5FWF5 840 aa4.58□□□□□ -1.68
SNX13-209ENST00000492626 KCTD15Q96SI1 283 aaPredicted RBP4.58□□□□□ -1.68
SNX13-209ENST00000492626 MTRQ99707 1265 aa4.58□□□□□ -1.68
SNX13-209ENST00000492626 M0R2N6 131 aa4.58□□□□□ -1.68
SNX13-209ENST00000492626 PPP1R12BO60237 982 aaPredicted RBP4.58□□□□□ -1.68
SNX13-209ENST00000492626 PCSK2P16519 638 aa4.58□□□□□ -1.68
SNX13-209ENST00000492626 FOXJ1Q92949 421 aa4.58□□□□□ -1.68
SNX13-209ENST00000492626 ASB16Q96NS5 453 aa4.58□□□□□ -1.68
SNX13-209ENST00000492626 LAMC1P11047 1609 aa4.58□□□□□ -1.68
SNX13-209ENST00000492626 HECW1Q76N89 1606 aa4.58□□□□□ -1.68
SNX13-209ENST00000492626 DISP1Q96F81 1524 aa4.58□□□□□ -1.68
SNX13-209ENST00000492626 LGR5O75473 907 aa4.58□□□□□ -1.68
SNX13-209ENST00000492626 PTPN5P54829 565 aa4.58□□□□□ -1.68
SNX13-209ENST00000492626 GAS2L2Q8NHY3 880 aa4.58□□□□□ -1.68
SNX13-209ENST00000492626 KIAA1024Q9UPX6 916 aa4.58□□□□□ -1.68
SNX13-209ENST00000492626 NEXMIFQ5QGS0 1516 aa4.58□□□□□ -1.68
SNX13-209ENST00000492626 IGSF3O75054 1194 aa4.57□□□□□ -1.68
SNX13-209ENST00000492626 DNAJC14Q6Y2X3 702 aaPredicted RBP4.57□□□□□ -1.68
SNX13-209ENST00000492626 THSD4Q6ZMP0 1018 aa4.57□□□□□ -1.68
SNX13-209ENST00000492626 TSEN2Q8NCE0 465 aaKnown RBP4.57□□□□□ -1.68
SNX13-209ENST00000492626 SCG3Q8WXD2 468 aaKnown RBP4.57□□□□□ -1.68
SNX13-209ENST00000492626 PDE3BQ13370 1112 aa4.57□□□□□ -1.68
SNX13-209ENST00000492626 TSNAXIP1Q2TAA8 658 aa4.57□□□□□ -1.68
SNX13-209ENST00000492626 SEPT3Q9UH03 358 aa4.57□□□□□ -1.68
SNX13-209ENST00000492626 ZBTB7BO15156 539 aaPredicted RBP4.57□□□□□ -1.68
SNX13-209ENST00000492626 HRO43593 1189 aa4.57□□□□□ -1.68
SNX13-209ENST00000492626 IGFBP4P22692 258 aa4.57□□□□□ -1.68
SNX13-209ENST00000492626 COL19A1Q14993 1142 aa4.57□□□□□ -1.68
SNX13-209ENST00000492626 CC2D2BQ6DHV5 1058 aa4.57□□□□□ -1.68
SNX13-209ENST00000492626 CYP2U1Q7Z449 544 aa4.57□□□□□ -1.68
SNX13-209ENST00000492626 EHBP1Q8NDI1 1231 aa4.57□□□□□ -1.68
SNX13-209ENST00000492626 RALGAPBQ86X10 1494 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms