RNA–Protein interactions for RNA: ENST00000492612.6

TRIT1-212, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 5

Gene TRIT1, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-212ENST00000492612 NMRK2Q9NPI5 230 aa16.52■□□□□ 0.24
TRIT1-212ENST00000492612 BRCA1P38398 1863 aaKnown RBP16.52■□□□□ 0.23
TRIT1-212ENST00000492612 COL15A1P39059 1388 aa16.51■□□□□ 0.23
TRIT1-212ENST00000492612 NFIXQ14938 502 aa16.51■□□□□ 0.23
TRIT1-212ENST00000492612 TTC5Q8N0Z6 440 aa16.5■□□□□ 0.23
TRIT1-212ENST00000492612 NARFQ9UHQ1 456 aa16.5■□□□□ 0.23
TRIT1-212ENST00000492612 COL3A1P02461 1466 aaPredicted RBP16.49■□□□□ 0.23
TRIT1-212ENST00000492612 BICDL1Q6ZP65 573 aa16.49■□□□□ 0.23
TRIT1-212ENST00000492612 BCL2L12Q9HB09 334 aa16.49■□□□□ 0.23
TRIT1-212ENST00000492612 TEFQ10587 303 aa16.48■□□□□ 0.23
TRIT1-212ENST00000492612 IL17REQ8NFR9 667 aa16.48■□□□□ 0.23
TRIT1-212ENST00000492612 RNF181Q9P0P0 153 aa16.48■□□□□ 0.23
TRIT1-212ENST00000492612 ZNF330Q9Y3S2 320 aaPredicted RBP16.48■□□□□ 0.23
TRIT1-212ENST00000492612 ARFGEF1Q9Y6D6 1849 aa16.47■□□□□ 0.23
TRIT1-212ENST00000492612 SERPINB2P05120 415 aa16.47■□□□□ 0.23
TRIT1-212ENST00000492612 ZNF496Q96IT1 587 aaPredicted RBP16.47■□□□□ 0.23
TRIT1-212ENST00000492612 GNAT3A8MTJ3 354 aa16.46■□□□□ 0.23
TRIT1-212ENST00000492612 RASSF7Q02833 373 aa16.46■□□□□ 0.23
TRIT1-212ENST00000492612 VSIG10Q8N0Z9 540 aa16.46■□□□□ 0.23
TRIT1-212ENST00000492612 GAS2L2Q8NHY3 880 aa16.46■□□□□ 0.23
TRIT1-212ENST00000492612 AFDNP55196 1824 aaKnown RBP16.45■□□□□ 0.22
TRIT1-212ENST00000492612 TOMM70O94826 608 aa16.45■□□□□ 0.22
TRIT1-212ENST00000492612 STARD3NLO95772 234 aa16.45■□□□□ 0.22
TRIT1-212ENST00000492612 UBR2Q8IWV8 1755 aa16.45■□□□□ 0.22
TRIT1-212ENST00000492612 CARMIL3Q8ND23 1372 aa16.44■□□□□ 0.22
TRIT1-212ENST00000492612 NPC1L1Q9UHC9 1359 aa16.44■□□□□ 0.22
TRIT1-212ENST00000492612 HEG1Q9ULI3 1381 aa16.44■□□□□ 0.22
TRIT1-212ENST00000492612 PRKAR2BP31323 418 aa16.44■□□□□ 0.22
TRIT1-212ENST00000492612 ZNF790Q6PG37 636 aa16.44■□□□□ 0.22
TRIT1-212ENST00000492612 C16orf71Q8IYS4 520 aaPredicted RBP16.44■□□□□ 0.22
TRIT1-212ENST00000492612 CCDC24Q8N4L8 307 aa16.44■□□□□ 0.22
TRIT1-212ENST00000492612 TBC1D2BQ9UPU7 963 aa16.44■□□□□ 0.22
TRIT1-212ENST00000492612 KCNQ3O43525 872 aa16.43■□□□□ 0.22
TRIT1-212ENST00000492612 EIF5P55010 431 aaKnown RBP16.43■□□□□ 0.22
TRIT1-212ENST00000492612 C2CD5Q86YS7 1000 aa16.43■□□□□ 0.22
TRIT1-212ENST00000492612 PHACTR3Q96KR7 559 aa16.43■□□□□ 0.22
TRIT1-212ENST00000492612 TBC1D9BQ66K14 1250 aa16.42■□□□□ 0.22
TRIT1-212ENST00000492612 CFAP53Q96M91 514 aa16.42■□□□□ 0.22
TRIT1-212ENST00000492612 RRAGCQ9HB90 399 aa16.42■□□□□ 0.22
TRIT1-212ENST00000492612 A0A087WZG4 1122 aa16.41■□□□□ 0.22
TRIT1-212ENST00000492612 A1BGP04217 495 aa16.41■□□□□ 0.22
TRIT1-212ENST00000492612 APLP1P51693 650 aa16.41■□□□□ 0.22
TRIT1-212ENST00000492612 ZNF219Q9P2Y4 722 aaPredicted RBP16.41■□□□□ 0.22
TRIT1-212ENST00000492612 NRXN2Q9P2S2 1712 aa16.41■□□□□ 0.22
TRIT1-212ENST00000492612 KDM2BQ8NHM5 1336 aa16.41■□□□□ 0.22
TRIT1-212ENST00000492612 H0YIN7 160 aa16.4■□□□□ 0.22
TRIT1-212ENST00000492612 PIP4K2AP48426 406 aaPredicted RBP16.4■□□□□ 0.22
TRIT1-212ENST00000492612 TTLL6Q8N841 843 aa16.4■□□□□ 0.22
TRIT1-212ENST00000492612 FMNL2Q96PY5 1086 aa16.4■□□□□ 0.22
TRIT1-212ENST00000492612 RSPH6AQ9H0K4 717 aa16.4■□□□□ 0.22
TRIT1-212ENST00000492612 SIPA1L3O60292 1781 aaPredicted RBP16.39■□□□□ 0.21
TRIT1-212ENST00000492612 BTBD11A6QL63 1104 aa16.39■□□□□ 0.21
TRIT1-212ENST00000492612 U2AF1L5P0DN76 240 aaPredicted RBP16.39■□□□□ 0.21
TRIT1-212ENST00000492612 PRELPP51888 382 aa16.39■□□□□ 0.21
TRIT1-212ENST00000492612 HTRA3P83110 453 aa16.39■□□□□ 0.21
TRIT1-212ENST00000492612 U2AF1Q01081 240 aaKnown RBP eCLIP16.39■□□□□ 0.21
TRIT1-212ENST00000492612 NPM2Q86SE8 214 aaKnown RBP16.39■□□□□ 0.21
TRIT1-212ENST00000492612 RBM46Q8TBY0 533 aaKnown RBP16.39■□□□□ 0.21
TRIT1-212ENST00000492612 ZNF622Q969S3 477 aaKnown RBP eCLIP16.39■□□□□ 0.21
TRIT1-212ENST00000492612 TEX13AQ9BXU3 409 aaPredicted RBP16.39■□□□□ 0.21
TRIT1-212ENST00000492612 PRAMEF22A3QJZ6 481 aa16.38■□□□□ 0.21
TRIT1-212ENST00000492612 NUDCQ9Y266 331 aa16.38■□□□□ 0.21
TRIT1-212ENST00000492612 SBF1O95248 1867 aa16.37■□□□□ 0.21
TRIT1-212ENST00000492612 NPHP1O15259 732 aa16.37■□□□□ 0.21
TRIT1-212ENST00000492612 PPP2R1AP30153 589 aa16.37■□□□□ 0.21
TRIT1-212ENST00000492612 IL6STP40189 918 aaPredicted RBP16.37■□□□□ 0.21
TRIT1-212ENST00000492612 DCTN1Q14203 1278 aa16.37■□□□□ 0.21
TRIT1-212ENST00000492612 IFFO2Q5TF58 517 aa16.37■□□□□ 0.21
TRIT1-212ENST00000492612 PRR5LQ6MZQ0 368 aa16.37■□□□□ 0.21
TRIT1-212ENST00000492612 MCM10Q7L590 875 aa16.37■□□□□ 0.21
TRIT1-212ENST00000492612 CEMIPQ8WUJ3 1361 aa16.37■□□□□ 0.21
TRIT1-212ENST00000492612 SCN7AQ01118 1682 aa16.37■□□□□ 0.21
TRIT1-212ENST00000492612 DLEC1Q9Y238 1755 aa16.36■□□□□ 0.21
TRIT1-212ENST00000492612 LMNB1P20700 586 aa16.36■□□□□ 0.21
TRIT1-212ENST00000492612 USP16Q9Y5T5 823 aa16.36■□□□□ 0.21
TRIT1-212ENST00000492612 NFKBIEO00221 500 aa16.35■□□□□ 0.21
TRIT1-212ENST00000492612 CAMTA2O94983 1202 aa16.35■□□□□ 0.21
TRIT1-212ENST00000492612 DZIP3Q86Y13 1208 aaKnown RBP16.35■□□□□ 0.21
TRIT1-212ENST00000492612 RTF1Q92541 710 aaKnown RBP16.35■□□□□ 0.21
TRIT1-212ENST00000492612 ANKRD31Q8N7Z5 1873 aa16.35■□□□□ 0.21
TRIT1-212ENST00000492612 C21orf2O43822 256 aa16.34■□□□□ 0.21
TRIT1-212ENST00000492612 PDE6BP35913 854 aa16.34■□□□□ 0.21
TRIT1-212ENST00000492612 DNAJC5GQ8N7S2 189 aa16.34■□□□□ 0.21
TRIT1-212ENST00000492612 SETDB2Q96T68 719 aa16.34■□□□□ 0.21
TRIT1-212ENST00000492612 BRIP1Q9BX63 1249 aa16.34■□□□□ 0.21
TRIT1-212ENST00000492612 CNBD1Q8NA66 436 aa16.33■□□□□ 0.2
TRIT1-212ENST00000492612 TNRC6CQ9HCJ0 1690 aaKnown RBP16.33■□□□□ 0.2
TRIT1-212ENST00000492612 COL11A2P13942 1736 aaPredicted RBP16.33■□□□□ 0.2
TRIT1-212ENST00000492612 WDR90Q96KV7 1748 aa16.33■□□□□ 0.2
TRIT1-212ENST00000492612 CEP350Q5VT06 3117 aa16.32■□□□□ 0.2
TRIT1-212ENST00000492612 FSTL1Q12841 308 aa16.32■□□□□ 0.2
TRIT1-212ENST00000492612 CCDC88AQ3V6T2 1871 aa16.31■□□□□ 0.2
TRIT1-212ENST00000492612 TIAM2Q8IVF5 1701 aa16.31■□□□□ 0.2
TRIT1-212ENST00000492612 GLTPD2A6NH11 291 aa16.31■□□□□ 0.2
TRIT1-212ENST00000492612 ST5P78524 1137 aa16.31■□□□□ 0.2
TRIT1-212ENST00000492612 MIS18AQ9NYP9 233 aa16.31■□□□□ 0.2
TRIT1-212ENST00000492612 ZC3H4Q9UPT8 1303 aaKnown RBP16.3■□□□□ 0.2
TRIT1-212ENST00000492612 FAM177BA6PVY3 158 aa16.3■□□□□ 0.2
TRIT1-212ENST00000492612 SNRPA1P09661 255 aaKnown RBP16.3■□□□□ 0.2
TRIT1-212ENST00000492612 SMC1BQ8NDV3 1235 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms