RNA–Protein interactions for RNA: ENST00000492479.1

PTPRE-210, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 866 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-210ENST00000492479 PXDNLA1KZ92 1463 aa17.48■□□□□ 0.39
PTPRE-210ENST00000492479 PRAMEF22A3QJZ6 481 aa17.47■□□□□ 0.39
PTPRE-210ENST00000492479 LRP10Q7Z4F1 713 aa17.47■□□□□ 0.39
PTPRE-210ENST00000492479 GTF3C3Q9Y5Q9 886 aa17.47■□□□□ 0.39
PTPRE-210ENST00000492479 PALLDQ8WX93 1383 aa17.47■□□□□ 0.39
PTPRE-210ENST00000492479 IBTKQ9P2D0 1353 aaPredicted RBP17.46■□□□□ 0.39
PTPRE-210ENST00000492479 KCNQ2O43526 872 aa17.46■□□□□ 0.39
PTPRE-210ENST00000492479 AAMPQ13685 434 aa17.46■□□□□ 0.39
PTPRE-210ENST00000492479 C20orf194Q5TEA3 1177 aa17.46■□□□□ 0.39
PTPRE-210ENST00000492479 DZIP1LQ8IYY4 767 aaKnown RBP17.46■□□□□ 0.39
PTPRE-210ENST00000492479 FRAT1Q92837 279 aaPredicted RBP17.46■□□□□ 0.39
PTPRE-210ENST00000492479 ACSBG1Q96GR2 724 aa17.46■□□□□ 0.39
PTPRE-210ENST00000492479 BCL11BQ9C0K0 894 aaPredicted RBP17.46■□□□□ 0.39
PTPRE-210ENST00000492479 HYPKQ9NX55 129 aa17.46■□□□□ 0.39
PTPRE-210ENST00000492479 USP16Q9Y5T5 823 aa17.46■□□□□ 0.39
PTPRE-210ENST00000492479 CANXP27824 592 aaKnown RBP17.45■□□□□ 0.38
PTPRE-210ENST00000492479 FLIIQ13045 1269 aa17.45■□□□□ 0.38
PTPRE-210ENST00000492479 FKBP8Q14318 412 aa17.45■□□□□ 0.38
PTPRE-210ENST00000492479 SYTL4Q96C24 671 aaPredicted RBP17.45■□□□□ 0.38
PTPRE-210ENST00000492479 SLC4A9Q96Q91 983 aa17.45■□□□□ 0.38
PTPRE-210ENST00000492479 CHPF2Q9P2E5 772 aa17.45■□□□□ 0.38
PTPRE-210ENST00000492479 PTCD1O75127 700 aaKnown RBP17.44■□□□□ 0.38
PTPRE-210ENST00000492479 RLBP1P12271 317 aa17.44■□□□□ 0.38
PTPRE-210ENST00000492479 EIF2S2P20042 333 aaKnown RBP17.44■□□□□ 0.38
PTPRE-210ENST00000492479 RGPD3A6NKT7 1758 aaPredicted RBP17.43■□□□□ 0.38
PTPRE-210ENST00000492479 RGPD4Q7Z3J3 1758 aa17.43■□□□□ 0.38
PTPRE-210ENST00000492479 TCERG1O14776 1098 aaKnown RBP17.43■□□□□ 0.38
PTPRE-210ENST00000492479 G2E3Q7L622 706 aa17.43■□□□□ 0.38
PTPRE-210ENST00000492479 LOC102724428A0A0B4J2F2 783 aa17.42■□□□□ 0.38
PTPRE-210ENST00000492479 SIK1P57059 783 aa17.42■□□□□ 0.38
PTPRE-210ENST00000492479 INTS3Q68E01 1043 aaKnown RBP17.42■□□□□ 0.38
PTPRE-210ENST00000492479 ILDR1Q86SU0 546 aaPredicted RBP17.42■□□□□ 0.38
PTPRE-210ENST00000492479 ATP10DQ9P241 1426 aa17.41■□□□□ 0.38
PTPRE-210ENST00000492479 STARD3NLO95772 234 aa17.41■□□□□ 0.38
PTPRE-210ENST00000492479 CYP19A1P11511 503 aaPredicted RBP17.41■□□□□ 0.38
PTPRE-210ENST00000492479 MVPQ14764 893 aaKnown RBP17.41■□□□□ 0.38
PTPRE-210ENST00000492479 PROSER3Q2NL68 480 aa17.41■□□□□ 0.38
PTPRE-210ENST00000492479 FTSJ3Q8IY81 847 aaKnown RBP17.41■□□□□ 0.38
PTPRE-210ENST00000492479 PANK1Q8TE04 598 aa17.41■□□□□ 0.38
PTPRE-210ENST00000492479 TNNQ9UQP3 1299 aa17.41■□□□□ 0.38
PTPRE-210ENST00000492479 TAF1LQ8IZX4 1826 aa17.41■□□□□ 0.38
PTPRE-210ENST00000492479 NBPF26B4DH59 902 aa17.4■□□□□ 0.38
PTPRE-210ENST00000492479 IRX6P78412 446 aaPredicted RBP17.4■□□□□ 0.38
PTPRE-210ENST00000492479 NBPF14Q5TI25 921 aa17.4■□□□□ 0.38
PTPRE-210ENST00000492479 NBPF10Q6P3W6 841 aaKnown RBP17.4■□□□□ 0.38
PTPRE-210ENST00000492479 DNAJC10Q8IXB1 793 aa17.4■□□□□ 0.38
PTPRE-210ENST00000492479 NBPF15Q8N660 670 aa17.4■□□□□ 0.38
PTPRE-210ENST00000492479 CRBNQ96SW2 442 aa17.4■□□□□ 0.38
PTPRE-210ENST00000492479 TNS1Q9HBL0 1735 aaKnown RBP17.4■□□□□ 0.38
PTPRE-210ENST00000492479 NUP188Q5SRE5 1749 aa17.39■□□□□ 0.37
PTPRE-210ENST00000492479 MYH14Q7Z406 1995 aaKnown RBP17.39■□□□□ 0.37
PTPRE-210ENST00000492479 FAM182BQ5T319 152 aa17.39■□□□□ 0.37
PTPRE-210ENST00000492479 PTF1AQ7RTS3 328 aa17.39■□□□□ 0.37
PTPRE-210ENST00000492479 EXOC6Q8TAG9 804 aa17.39■□□□□ 0.37
PTPRE-210ENST00000492479 NECTIN2Q92692 538 aa17.39■□□□□ 0.37
PTPRE-210ENST00000492479 RBM42Q9BTD8 480 aaKnown RBP17.39■□□□□ 0.37
PTPRE-210ENST00000492479 PHAXQ9H814 394 aaKnown RBP17.39■□□□□ 0.37
PTPRE-210ENST00000492479 DDX19BQ9UMR2 479 aa17.39■□□□□ 0.37
PTPRE-210ENST00000492479 ADCY9O60503 1353 aa17.39■□□□□ 0.37
PTPRE-210ENST00000492479 TMEM57Q8N5G2 664 aa17.38■□□□□ 0.37
PTPRE-210ENST00000492479 CCT4P50991 539 aaKnown RBP17.37■□□□□ 0.37
PTPRE-210ENST00000492479 FKBP5Q13451 457 aaPredicted RBP17.37■□□□□ 0.37
PTPRE-210ENST00000492479 KSR2Q6VAB6 950 aa17.37■□□□□ 0.37
PTPRE-210ENST00000492479 CLUAP1Q96AJ1 413 aa17.37■□□□□ 0.37
PTPRE-210ENST00000492479 CHMP4BQ9H444 224 aaKnown RBP17.37■□□□□ 0.37
PTPRE-210ENST00000492479 COG6Q9Y2V7 657 aa17.37■□□□□ 0.37
PTPRE-210ENST00000492479 CNTNAP4Q9C0A0 1308 aa17.37■□□□□ 0.37
PTPRE-210ENST00000492479 ARFGEF2Q9Y6D5 1785 aa17.37■□□□□ 0.37
PTPRE-210ENST00000492479 DDX58O95786 925 aaKnown RBP17.36■□□□□ 0.37
PTPRE-210ENST00000492479 HMGB2P26583 209 aaKnown RBP17.36■□□□□ 0.37
PTPRE-210ENST00000492479 ATP6V1AP38606 617 aa17.36■□□□□ 0.37
PTPRE-210ENST00000492479 ITPK1Q13572 414 aa17.36■□□□□ 0.37
PTPRE-210ENST00000492479 PPP4R2Q9NY27 417 aa17.36■□□□□ 0.37
PTPRE-210ENST00000492479 EP400Q96L91 3159 aa17.36■□□□□ 0.37
PTPRE-210ENST00000492479 ANXA1P04083 346 aa17.35■□□□□ 0.37
PTPRE-210ENST00000492479 A1BGP04217 495 aa17.35■□□□□ 0.37
PTPRE-210ENST00000492479 IL6STP40189 918 aaPredicted RBP17.35■□□□□ 0.37
PTPRE-210ENST00000492479 RC3H1Q5TC82 1133 aaKnown RBP17.35■□□□□ 0.37
PTPRE-210ENST00000492479 PLSCR1O15162 318 aa17.34■□□□□ 0.37
PTPRE-210ENST00000492479 SLC27A3Q5K4L6 730 aa17.34■□□□□ 0.37
PTPRE-210ENST00000492479 INTS5Q6P9B9 1019 aaKnown RBP17.34■□□□□ 0.37
PTPRE-210ENST00000492479 XAGE3Q8WTP9 111 aa17.34■□□□□ 0.37
PTPRE-210ENST00000492479 DNAAF4Q8WXU2 420 aa17.34■□□□□ 0.37
PTPRE-210ENST00000492479 CCDC87Q9NVE4 849 aa17.34■□□□□ 0.37
PTPRE-210ENST00000492479 PI4KAP2A4QPH2 592 aa17.33■□□□□ 0.36
PTPRE-210ENST00000492479 ZBTB7BO15156 539 aaPredicted RBP17.33■□□□□ 0.36
PTPRE-210ENST00000492479 RGL2O15211 777 aa17.33■□□□□ 0.36
PTPRE-210ENST00000492479 COPS6Q7L5N1 327 aa17.33■□□□□ 0.36
PTPRE-210ENST00000492479 PI4KAP1Q8N8J0 262 aa17.33■□□□□ 0.36
PTPRE-210ENST00000492479 PLBD2Q8NHP8 589 aa17.33■□□□□ 0.36
PTPRE-210ENST00000492479 ZBTB40Q9NUA8 1239 aa17.33■□□□□ 0.36
PTPRE-210ENST00000492479 F6X3S4 739 aa17.32■□□□□ 0.36
PTPRE-210ENST00000492479 MYL6BP14649 208 aa17.32■□□□□ 0.36
PTPRE-210ENST00000492479 CRKLP46109 303 aaKnown RBP17.32■□□□□ 0.36
PTPRE-210ENST00000492479 EIF5P55010 431 aaKnown RBP17.32■□□□□ 0.36
PTPRE-210ENST00000492479 BEND3Q5T5X7 828 aa17.32■□□□□ 0.36
PTPRE-210ENST00000492479 ITPRIPQ8IWB1 547 aa17.32■□□□□ 0.36
PTPRE-210ENST00000492479 ZBTB1Q9Y2K1 713 aa17.32■□□□□ 0.36
PTPRE-210ENST00000492479 C4BP0C0L5 1744 aa17.32■□□□□ 0.36
PTPRE-210ENST00000492479 ALDH1L1O75891 902 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms