RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 C1orf216Q8TAB5 229 aa6.33□□□□□ -1.4
HMGB1P30-201ENST00000492455 TRIM11Q96F44 468 aa6.33□□□□□ -1.4
HMGB1P30-201ENST00000492455 KRTAP4-12Q9BQ66 201 aa6.33□□□□□ -1.4
HMGB1P30-201ENST00000492455 FAM117AQ9C073 453 aa6.33□□□□□ -1.4
HMGB1P30-201ENST00000492455 ZCCHC2Q9C0B9 1178 aaKnown RBP6.33□□□□□ -1.4
HMGB1P30-201ENST00000492455 FHDC1Q9C0D6 1143 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P30-201ENST00000492455 TPSG1Q9NRR2 321 aa6.33□□□□□ -1.4
HMGB1P30-201ENST00000492455 DCDC2BA2VCK2 349 aa6.32□□□□□ -1.4
HMGB1P30-201ENST00000492455 PLA2G4AP47712 749 aa6.32□□□□□ -1.4
HMGB1P30-201ENST00000492455 TLR1Q15399 786 aa6.32□□□□□ -1.4
HMGB1P30-201ENST00000492455 FAM182BQ5T319 152 aa6.32□□□□□ -1.4
HMGB1P30-201ENST00000492455 PPARGC1BQ86YN6 1023 aaKnown RBP6.32□□□□□ -1.4
HMGB1P30-201ENST00000492455 HRH3Q9Y5N1 445 aa6.32□□□□□ -1.4
HMGB1P30-201ENST00000492455 CD33P20138 364 aa6.31□□□□□ -1.4
HMGB1P30-201ENST00000492455 FOXD4L6Q3SYB3 417 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P30-201ENST00000492455 FOXD4L3Q6VB84 417 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P30-201ENST00000492455 FCHSD1Q86WN1 690 aa6.31□□□□□ -1.4
HMGB1P30-201ENST00000492455 GJA3Q9Y6H8 435 aa6.31□□□□□ -1.4
HMGB1P30-201ENST00000492455 KHNYNO15037 678 aaKnown RBP6.3□□□□□ -1.4
HMGB1P30-201ENST00000492455 MAPTP10636 758 aaKnown RBP6.3□□□□□ -1.4
HMGB1P30-201ENST00000492455 NBPF1Q3BBV0 1214 aa6.3□□□□□ -1.4
HMGB1P30-201ENST00000492455 ARSJQ5FYB0 599 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P30-201ENST00000492455 PRSS36Q5K4E3 855 aa6.3□□□□□ -1.4
HMGB1P30-201ENST00000492455 ZNF468Q5VIY5 522 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P30-201ENST00000492455 AIDAQ96BJ3 306 aa6.3□□□□□ -1.4
HMGB1P30-201ENST00000492455 PCBP4P57723 403 aaKnown RBP6.29□□□□□ -1.4
HMGB1P30-201ENST00000492455 LRP8Q14114 963 aa6.29□□□□□ -1.4
HMGB1P30-201ENST00000492455 IL27Q8NEV9 243 aa6.29□□□□□ -1.4
HMGB1P30-201ENST00000492455 NIFKQ9BYG3 293 aaKnown RBP6.29□□□□□ -1.4
HMGB1P30-201ENST00000492455 DNAAF2Q9NVR5 837 aaKnown RBP6.29□□□□□ -1.4
HMGB1P30-201ENST00000492455 ELOA3CA0A087WX78 387 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P30-201ENST00000492455 ELOA3DA6NLF2 546 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P30-201ENST00000492455 TATP17735 454 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P30-201ENST00000492455 TNP2Q05952 138 aa6.28□□□□□ -1.4
HMGB1P30-201ENST00000492455 USP4Q13107 963 aa6.28□□□□□ -1.4
HMGB1P30-201ENST00000492455 TRIM28Q13263 835 aaKnown RBP6.28□□□□□ -1.4
HMGB1P30-201ENST00000492455 ELOA3BQ3SY89 546 aa6.28□□□□□ -1.4
HMGB1P30-201ENST00000492455 ELOA3Q8NG57 546 aa6.28□□□□□ -1.4
HMGB1P30-201ENST00000492455 GOLGA2P5Q9HBQ8 144 aa6.28□□□□□ -1.4
HMGB1P30-201ENST00000492455 SIRT1Q96EB6 747 aa6.27□□□□□ -1.41
HMGB1P30-201ENST00000492455 PCMTD1Q96MG8 357 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P30-201ENST00000492455 KLF15Q9UIH9 416 aa6.27□□□□□ -1.41
HMGB1P30-201ENST00000492455 A0A1W2PNR3 127 aa6.26□□□□□ -1.41
HMGB1P30-201ENST00000492455 ATP4AP20648 1035 aa6.26□□□□□ -1.41
HMGB1P30-201ENST00000492455 GJD4Q96KN9 370 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P30-201ENST00000492455 CDCA7Q9BWT1 371 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P30-201ENST00000492455 ETNK1Q9HBU6 452 aa6.26□□□□□ -1.41
HMGB1P30-201ENST00000492455 APBB1O00213 710 aa6.25□□□□□ -1.41
HMGB1P30-201ENST00000492455 FAM157BP0CG42 384 aa6.25□□□□□ -1.41
HMGB1P30-201ENST00000492455 MARK1Q9P0L2 795 aa6.25□□□□□ -1.41
HMGB1P30-201ENST00000492455 DOLKQ9UPQ8 538 aa6.25□□□□□ -1.41
HMGB1P30-201ENST00000492455 FAM229AH3BQW9 127 aa6.24□□□□□ -1.41
HMGB1P30-201ENST00000492455 H2AFB1P0C5Y9 115 aa6.24□□□□□ -1.41
HMGB1P30-201ENST00000492455 H2AFB2P0C5Z0 115 aa6.24□□□□□ -1.41
HMGB1P30-201ENST00000492455 LAMC2Q13753 1193 aa6.24□□□□□ -1.41
HMGB1P30-201ENST00000492455 CCDC85AQ96PX6 553 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P30-201ENST00000492455 CEP126Q9P2H0 1117 aa6.24□□□□□ -1.41
HMGB1P30-201ENST00000492455 GTF3C3Q9Y5Q9 886 aa6.24□□□□□ -1.41
HMGB1P30-201ENST00000492455 C9orf172C9J069 976 aa6.23□□□□□ -1.41
HMGB1P30-201ENST00000492455 M0R082 166 aa6.23□□□□□ -1.41
HMGB1P30-201ENST00000492455 BICDL1Q6ZP65 573 aa6.23□□□□□ -1.41
HMGB1P30-201ENST00000492455 SYT9Q86SS6 491 aa6.23□□□□□ -1.41
HMGB1P30-201ENST00000492455 ZNF417Q8TAU3 575 aa6.23□□□□□ -1.41
HMGB1P30-201ENST00000492455 ZNF587Q96SQ5 575 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P30-201ENST00000492455 NDUFB9Q9Y6M9 179 aa6.23□□□□□ -1.41
HMGB1P30-201ENST00000492455 NEUROD1Q13562 356 aa6.22□□□□□ -1.41
HMGB1P30-201ENST00000492455 ZDHHC3Q9NYG2 299 aa6.22□□□□□ -1.41
HMGB1P30-201ENST00000492455 HYAL3O43820 417 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P30-201ENST00000492455 INHAP05111 366 aa6.21□□□□□ -1.42
HMGB1P30-201ENST00000492455 GDF10P55107 478 aa6.21□□□□□ -1.42
HMGB1P30-201ENST00000492455 SLFNL1Q499Z3 407 aa6.21□□□□□ -1.42
HMGB1P30-201ENST00000492455 OXLD1Q5BKU9 147 aa6.21□□□□□ -1.42
HMGB1P30-201ENST00000492455 SAMD5Q5TGI4 173 aa6.21□□□□□ -1.42
HMGB1P30-201ENST00000492455 KRTAP9-9Q9BYP9 154 aa6.21□□□□□ -1.42
HMGB1P30-201ENST00000492455 KRTAP9-4Q9BYQ2 154 aa6.21□□□□□ -1.42
HMGB1P30-201ENST00000492455 GOPCQ9HD26 462 aa6.21□□□□□ -1.42
HMGB1P30-201ENST00000492455 PRDM6Q9NQX0 595 aa6.21□□□□□ -1.42
HMGB1P30-201ENST00000492455 SIN3BO75182 1162 aa6.2□□□□□ -1.42
HMGB1P30-201ENST00000492455 SMTNP53814 917 aa6.2□□□□□ -1.42
HMGB1P30-201ENST00000492455 GRIK4Q16099 956 aa6.2□□□□□ -1.42
HMGB1P30-201ENST00000492455 ADARB2-AS1A8MUL3 147 aa6.19□□□□□ -1.42
HMGB1P30-201ENST00000492455 STAU1O95793 577 aaKnown RBP6.19□□□□□ -1.42
HMGB1P30-201ENST00000492455 NRG1Q02297 640 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P30-201ENST00000492455 TRAPPC3LQ5T215 181 aa6.19□□□□□ -1.42
HMGB1P30-201ENST00000492455 ZIC5Q96T25 663 aa6.19□□□□□ -1.42
HMGB1P30-201ENST00000492455 NEUROD4Q9HD90 331 aa6.19□□□□□ -1.42
HMGB1P30-201ENST00000492455 PAX4O43316 350 aa6.18□□□□□ -1.42
HMGB1P30-201ENST00000492455 COBLO75128 1261 aa6.18□□□□□ -1.42
HMGB1P30-201ENST00000492455 RAC1P63000 192 aa6.18□□□□□ -1.42
HMGB1P30-201ENST00000492455 EIF4G2P78344 907 aaKnown RBP eCLIP6.18□□□□□ -1.42
HMGB1P30-201ENST00000492455 TXNRD3Q86VQ6 643 aa6.18□□□□□ -1.42
HMGB1P30-201ENST00000492455 KRTAP19-1Q8IUB9 90 aa6.18□□□□□ -1.42
HMGB1P30-201ENST00000492455 TP53INP1Q96A56 240 aa6.18□□□□□ -1.42
HMGB1P30-201ENST00000492455 CABP1Q9NZU7 370 aa6.18□□□□□ -1.42
HMGB1P30-201ENST00000492455 HCN2Q9UL51 889 aa6.18□□□□□ -1.42
HMGB1P30-201ENST00000492455 TIMELESSQ9UNS1 1208 aa6.18□□□□□ -1.42
HMGB1P30-201ENST00000492455 KRTAP4-8A0A0G2JLE6 195 aa6.17□□□□□ -1.42
HMGB1P30-201ENST00000492455 EFSO43281 561 aa6.17□□□□□ -1.42
HMGB1P30-201ENST00000492455 ELNP15502 786 aa6.17□□□□□ -1.42
HMGB1P30-201ENST00000492455 TXKP42681 527 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms