RNA–Protein interactions for RNA: ENST00000492314.3

PBX3-210, Transcript of PBX homeobox 3, humanhuman

Gene PBX3, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-210ENST00000492314 TIMELESSQ9UNS1 1208 aa12.69□□□□□ -0.38
PBX3-210ENST00000492314 PARP3Q9Y6F1 533 aa12.69□□□□□ -0.38
PBX3-210ENST00000492314 SBF1O95248 1867 aa12.69□□□□□ -0.38
PBX3-210ENST00000492314 KCPQ6ZWJ8 1503 aa12.68□□□□□ -0.38
PBX3-210ENST00000492314 HTRA3P83110 453 aa12.68□□□□□ -0.38
PBX3-210ENST00000492314 DDR1Q08345 913 aa12.68□□□□□ -0.38
PBX3-210ENST00000492314 TNRC6CQ9HCJ0 1690 aaKnown RBP12.67□□□□□ -0.38
PBX3-210ENST00000492314 PCNTO95613 3336 aa12.67□□□□□ -0.38
PBX3-210ENST00000492314 KDM2BQ8NHM5 1336 aa12.67□□□□□ -0.38
PBX3-210ENST00000492314 USP42Q9H9J4 1324 aaKnown RBP12.67□□□□□ -0.38
PBX3-210ENST00000492314 HSP90AB1P08238 724 aaKnown RBP12.67□□□□□ -0.38
PBX3-210ENST00000492314 ZC3H4Q9UPT8 1303 aaKnown RBP12.66□□□□□ -0.38
PBX3-210ENST00000492314 TM4SF1P30408 202 aa12.66□□□□□ -0.38
PBX3-210ENST00000492314 FKBP8Q14318 412 aa12.66□□□□□ -0.38
PBX3-210ENST00000492314 DALRD3Q5D0E6 543 aaKnown RBP12.66□□□□□ -0.38
PBX3-210ENST00000492314 TJP1Q07157 1748 aa12.65□□□□□ -0.38
PBX3-210ENST00000492314 POLRMTO00411 1230 aaKnown RBP12.65□□□□□ -0.38
PBX3-210ENST00000492314 CRKLP46109 303 aaKnown RBP12.65□□□□□ -0.38
PBX3-210ENST00000492314 RNF181Q9P0P0 153 aa12.65□□□□□ -0.38
PBX3-210ENST00000492314 SRP68Q9UHB9 627 aaKnown RBP12.65□□□□□ -0.38
PBX3-210ENST00000492314 PRR29P0C7W0 189 aa12.64□□□□□ -0.39
PBX3-210ENST00000492314 AMOTQ4VCS5 1084 aa12.64□□□□□ -0.39
PBX3-210ENST00000492314 PLEKHO1Q53GL0 409 aaPredicted RBP12.64□□□□□ -0.39
PBX3-210ENST00000492314 INTS5Q6P9B9 1019 aaKnown RBP12.64□□□□□ -0.39
PBX3-210ENST00000492314 C16orf71Q8IYS4 520 aaPredicted RBP12.64□□□□□ -0.39
PBX3-210ENST00000492314 RRAGCQ9HB90 399 aa12.64□□□□□ -0.39
PBX3-210ENST00000492314 NRXN2Q9P2S2 1712 aa12.63□□□□□ -0.39
PBX3-210ENST00000492314 CHRNA5P30532 468 aa12.63□□□□□ -0.39
PBX3-210ENST00000492314 CABP4P57796 275 aa12.63□□□□□ -0.39
PBX3-210ENST00000492314 SMC1BQ8NDV3 1235 aa12.63□□□□□ -0.39
PBX3-210ENST00000492314 PRELPP51888 382 aa12.62□□□□□ -0.39
PBX3-210ENST00000492314 EIF4G2P78344 907 aaKnown RBP eCLIP12.62□□□□□ -0.39
PBX3-210ENST00000492314 ZNF530Q6P9A1 599 aaPredicted RBP12.62□□□□□ -0.39
PBX3-210ENST00000492314 DLEC1Q9Y238 1755 aa12.61□□□□□ -0.39
PBX3-210ENST00000492314 PTCD1O75127 700 aaKnown RBP12.61□□□□□ -0.39
PBX3-210ENST00000492314 NFATC2IPQ8NCF5 419 aa12.61□□□□□ -0.39
PBX3-210ENST00000492314 GLTPD2A6NH11 291 aa12.6□□□□□ -0.39
PBX3-210ENST00000492314 PRKAR2AP13861 404 aaKnown RBP12.6□□□□□ -0.39
PBX3-210ENST00000492314 MTHFSP49914 203 aa12.6□□□□□ -0.39
PBX3-210ENST00000492314 SCN11AQ9UI33 1791 aa12.6□□□□□ -0.39
PBX3-210ENST00000492314 AFDNP55196 1824 aaKnown RBP12.6□□□□□ -0.39
PBX3-210ENST00000492314 SOS1Q07889 1333 aaPredicted RBP12.6□□□□□ -0.39
PBX3-210ENST00000492314 VEGFAP15692 232 aaPredicted RBP12.59□□□□□ -0.39
PBX3-210ENST00000492314 LMNB1P20700 586 aa12.59□□□□□ -0.39
PBX3-210ENST00000492314 TNNT2P45379 298 aaPredicted RBP12.59□□□□□ -0.39
PBX3-210ENST00000492314 AEBP1Q8IUX7 1158 aa12.59□□□□□ -0.39
PBX3-210ENST00000492314 TNS4Q8IZW8 715 aa12.59□□□□□ -0.39
PBX3-210ENST00000492314 MRC1P22897 1456 aa12.59□□□□□ -0.39
PBX3-210ENST00000492314 POTECB2RU33 542 aa12.58□□□□□ -0.4
PBX3-210ENST00000492314 RASSF7Q02833 373 aa12.58□□□□□ -0.4
PBX3-210ENST00000492314 NFIXQ14938 502 aa12.58□□□□□ -0.4
PBX3-210ENST00000492314 USPL1Q5W0Q7 1092 aa12.58□□□□□ -0.4
PBX3-210ENST00000492314 PANK3Q9H999 370 aa12.58□□□□□ -0.4
PBX3-210ENST00000492314 BCL2L12Q9HB09 334 aa12.58□□□□□ -0.4
PBX3-210ENST00000492314 CYP19A1P11511 503 aaPredicted RBP12.57□□□□□ -0.4
PBX3-210ENST00000492314 C1orf141Q5JVX7 400 aa12.57□□□□□ -0.4
PBX3-210ENST00000492314 DNAJC10Q8IXB1 793 aa12.57□□□□□ -0.4
PBX3-210ENST00000492314 NARFQ9UHQ1 456 aa12.57□□□□□ -0.4
PBX3-210ENST00000492314 NFKBIEO00221 500 aa12.56□□□□□ -0.4
PBX3-210ENST00000492314 ZPR1O75312 459 aa12.56□□□□□ -0.4
PBX3-210ENST00000492314 HSPA1AP0DMV8 641 aaKnown RBP12.56□□□□□ -0.4
PBX3-210ENST00000492314 HSPA1BP0DMV9 641 aaKnown RBP12.56□□□□□ -0.4
PBX3-210ENST00000492314 SLC52A2Q9HAB3 445 aa12.56□□□□□ -0.4
PBX3-210ENST00000492314 TIAM2Q8IVF5 1701 aa12.56□□□□□ -0.4
PBX3-210ENST00000492314 KIF7Q2M1P5 1343 aa12.56□□□□□ -0.4
PBX3-210ENST00000492314 IL13P35225 146 aa12.55□□□□□ -0.4
PBX3-210ENST00000492314 TTLL6Q8N841 843 aa12.55□□□□□ -0.4
PBX3-210ENST00000492314 VIRMAQ69YN4 1812 aaKnown RBP12.55□□□□□ -0.4
PBX3-210ENST00000492314 COL15A1P39059 1388 aa12.55□□□□□ -0.4
PBX3-210ENST00000492314 AKAP4Q5JQC9 854 aa12.54□□□□□ -0.4
PBX3-210ENST00000492314 SULT6B1Q6IMI4 303 aa12.54□□□□□ -0.4
PBX3-210ENST00000492314 CCDC88AQ3V6T2 1871 aa12.54□□□□□ -0.4
PBX3-210ENST00000492314 CARMIL3Q8ND23 1372 aa12.54□□□□□ -0.4
PBX3-210ENST00000492314 HAX1O00165 279 aa12.53□□□□□ -0.4
PBX3-210ENST00000492314 SERPINB2P05120 415 aa12.53□□□□□ -0.4
PBX3-210ENST00000492314 VSIG10Q8N0Z9 540 aa12.53□□□□□ -0.4
PBX3-210ENST00000492314 LGR6Q9HBX8 967 aa12.53□□□□□ -0.4
PBX3-210ENST00000492314 ZBTB1Q9Y2K1 713 aa12.53□□□□□ -0.4
PBX3-210ENST00000492314 DICER1Q9UPY3 1922 aaKnown RBP12.52□□□□□ -0.4
PBX3-210ENST00000492314 UBR2Q8IWV8 1755 aa12.52□□□□□ -0.41
PBX3-210ENST00000492314 CHADLQ6NUI6 762 aa12.52□□□□□ -0.41
PBX3-210ENST00000492314 FER1L6Q2WGJ9 1857 aa12.52□□□□□ -0.41
PBX3-210ENST00000492314 ANKRD31Q8N7Z5 1873 aa12.52□□□□□ -0.41
PBX3-210ENST00000492314 RNMTO43148 476 aaKnown RBP12.51□□□□□ -0.41
PBX3-210ENST00000492314 EIF5P55010 431 aaKnown RBP12.51□□□□□ -0.41
PBX3-210ENST00000492314 SLC39A6Q13433 755 aa12.51□□□□□ -0.41
PBX3-210ENST00000492314 C2CD5Q86YS7 1000 aa12.51□□□□□ -0.41
PBX3-210ENST00000492314 LTBP3Q9NS15 1303 aa12.51□□□□□ -0.41
PBX3-210ENST00000492314 H0YIN7 160 aa12.5□□□□□ -0.41
PBX3-210ENST00000492314 CREBZFQ9NS37 354 aa12.5□□□□□ -0.41
PBX3-210ENST00000492314 PDZRN3Q9UPQ7 1066 aa12.5□□□□□ -0.41
PBX3-210ENST00000492314 COL11A2P13942 1736 aaPredicted RBP12.49□□□□□ -0.41
PBX3-210ENST00000492314 BRIP1Q9BX63 1249 aa12.49□□□□□ -0.41
PBX3-210ENST00000492314 AMER1Q5JTC6 1135 aaPredicted RBP12.48□□□□□ -0.41
PBX3-210ENST00000492314 DPY19L2Q6NUT2 758 aa12.48□□□□□ -0.41
PBX3-210ENST00000492314 MORC1Q86VD1 984 aa12.48□□□□□ -0.41
PBX3-210ENST00000492314 SCN7AQ01118 1682 aa12.48□□□□□ -0.41
PBX3-210ENST00000492314 PASKQ96RG2 1323 aa12.47□□□□□ -0.41
PBX3-210ENST00000492314 ERFEQ4G0M1 354 aa12.47□□□□□ -0.41
PBX3-210ENST00000492314 PRR5LQ6MZQ0 368 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms