RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-231ENST00000492170 PIM2Q9P1W9 311 aa20.61■□□□□ 0.89
MRPL55-231ENST00000492170 UBR2Q8IWV8 1755 aa20.6■□□□□ 0.89
MRPL55-231ENST00000492170 GNAT3A8MTJ3 354 aa20.6■□□□□ 0.89
MRPL55-231ENST00000492170 KCNA3P22001 575 aa20.6■□□□□ 0.89
MRPL55-231ENST00000492170 TM4SF1P30408 202 aa20.6■□□□□ 0.89
MRPL55-231ENST00000492170 NARFQ9UHQ1 456 aa20.6■□□□□ 0.89
MRPL55-231ENST00000492170 CEP350Q5VT06 3117 aa20.6■□□□□ 0.89
MRPL55-231ENST00000492170 STARD3NLO95772 234 aa20.58■□□□□ 0.89
MRPL55-231ENST00000492170 DALRD3Q5D0E6 543 aaKnown RBP20.58■□□□□ 0.89
MRPL55-231ENST00000492170 IL17REQ8NFR9 667 aa20.57■□□□□ 0.88
MRPL55-231ENST00000492170 ARFGEF1Q9Y6D6 1849 aa20.57■□□□□ 0.88
MRPL55-231ENST00000492170 CANXP27824 592 aaKnown RBP20.56■□□□□ 0.88
MRPL55-231ENST00000492170 CHRNA5P30532 468 aa20.56■□□□□ 0.88
MRPL55-231ENST00000492170 NFIXQ14938 502 aa20.56■□□□□ 0.88
MRPL55-231ENST00000492170 ZNF790Q6PG37 636 aa20.56■□□□□ 0.88
MRPL55-231ENST00000492170 NUDCQ9Y266 331 aa20.56■□□□□ 0.88
MRPL55-231ENST00000492170 KIF3CO14782 793 aa20.55■□□□□ 0.88
MRPL55-231ENST00000492170 PRKAR2BP31323 418 aa20.55■□□□□ 0.88
MRPL55-231ENST00000492170 ZNF496Q96IT1 587 aaPredicted RBP20.55■□□□□ 0.88
MRPL55-231ENST00000492170 TEX13AQ9BXU3 409 aaPredicted RBP20.55■□□□□ 0.88
MRPL55-231ENST00000492170 HEG1Q9ULI3 1381 aa20.55■□□□□ 0.88
MRPL55-231ENST00000492170 A0A087WZG4 1122 aa20.54■□□□□ 0.88
MRPL55-231ENST00000492170 RSPH6AQ9H0K4 717 aa20.54■□□□□ 0.88
MRPL55-231ENST00000492170 HSPA6P17066 643 aa20.53■□□□□ 0.88
MRPL55-231ENST00000492170 EIF5P55010 431 aaKnown RBP20.53■□□□□ 0.88
MRPL55-231ENST00000492170 BCL2L12Q9HB09 334 aa20.53■□□□□ 0.88
MRPL55-231ENST00000492170 CEMIPQ8WUJ3 1361 aa20.53■□□□□ 0.88
MRPL55-231ENST00000492170 SIPA1L3O60292 1781 aaPredicted RBP20.53■□□□□ 0.88
MRPL55-231ENST00000492170 SERPINB2P05120 415 aa20.52■□□□□ 0.88
MRPL55-231ENST00000492170 C9orf131Q5VYM1 1079 aa20.52■□□□□ 0.88
MRPL55-231ENST00000492170 FMNL2Q96PY5 1086 aa20.52■□□□□ 0.88
MRPL55-231ENST00000492170 NRXN2Q9P2S2 1712 aa20.51■□□□□ 0.87
MRPL55-231ENST00000492170 PHACTR3Q96KR7 559 aa20.51■□□□□ 0.87
MRPL55-231ENST00000492170 AFDNP55196 1824 aaKnown RBP20.5■□□□□ 0.87
MRPL55-231ENST00000492170 BTBD11A6QL63 1104 aa20.5■□□□□ 0.87
MRPL55-231ENST00000492170 U2AF1L5P0DN76 240 aaPredicted RBP20.5■□□□□ 0.87
MRPL55-231ENST00000492170 PPP2R1AP30153 589 aa20.5■□□□□ 0.87
MRPL55-231ENST00000492170 U2AF1Q01081 240 aaKnown RBP eCLIP20.5■□□□□ 0.87
MRPL55-231ENST00000492170 ZNF330Q9Y3S2 320 aaPredicted RBP20.5■□□□□ 0.87
MRPL55-231ENST00000492170 IL6STP40189 918 aaPredicted RBP20.49■□□□□ 0.87
MRPL55-231ENST00000492170 BICDL1Q6ZP65 573 aa20.49■□□□□ 0.87
MRPL55-231ENST00000492170 NPM2Q86SE8 214 aaKnown RBP20.49■□□□□ 0.87
MRPL55-231ENST00000492170 RTF1Q92541 710 aaKnown RBP20.48■□□□□ 0.87
MRPL55-231ENST00000492170 RNF181Q9P0P0 153 aa20.48■□□□□ 0.87
MRPL55-231ENST00000492170 SCN7AQ01118 1682 aa20.48■□□□□ 0.87
MRPL55-231ENST00000492170 NMRK2Q9NPI5 230 aa20.47■□□□□ 0.87
MRPL55-231ENST00000492170 TOMM70O94826 608 aa20.46■□□□□ 0.87
MRPL55-231ENST00000492170 C2CD5Q86YS7 1000 aa20.46■□□□□ 0.87
MRPL55-231ENST00000492170 CARMIL3Q8ND23 1372 aa20.46■□□□□ 0.87
MRPL55-231ENST00000492170 DLEC1Q9Y238 1755 aa20.45■□□□□ 0.86
MRPL55-231ENST00000492170 H0YIN7 160 aa20.45■□□□□ 0.86
MRPL55-231ENST00000492170 KCNQ3O43525 872 aa20.45■□□□□ 0.86
MRPL55-231ENST00000492170 TBC1D9BQ66K14 1250 aa20.45■□□□□ 0.86
MRPL55-231ENST00000492170 TTLL6Q8N841 843 aa20.45■□□□□ 0.86
MRPL55-231ENST00000492170 TBC1D2BQ9UPU7 963 aa20.45■□□□□ 0.86
MRPL55-231ENST00000492170 KDM2BQ8NHM5 1336 aa20.45■□□□□ 0.86
MRPL55-231ENST00000492170 A1BGP04217 495 aa20.44■□□□□ 0.86
MRPL55-231ENST00000492170 MCM10Q7L590 875 aa20.43■□□□□ 0.86
MRPL55-231ENST00000492170 C16orf71Q8IYS4 520 aaPredicted RBP20.43■□□□□ 0.86
MRPL55-231ENST00000492170 PDZRN3Q9UPQ7 1066 aa20.43■□□□□ 0.86
MRPL55-231ENST00000492170 RASSF7Q02833 373 aa20.42■□□□□ 0.86
MRPL55-231ENST00000492170 NPHP1O15259 732 aa20.41■□□□□ 0.86
MRPL55-231ENST00000492170 HTATSF1O43719 755 aaKnown RBP20.41■□□□□ 0.86
MRPL55-231ENST00000492170 CAMTA2O94983 1202 aa20.41■□□□□ 0.86
MRPL55-231ENST00000492170 DZIP3Q86Y13 1208 aaKnown RBP20.41■□□□□ 0.86
MRPL55-231ENST00000492170 BRIP1Q9BX63 1249 aa20.41■□□□□ 0.86
MRPL55-231ENST00000492170 ZC3H4Q9UPT8 1303 aaKnown RBP20.41■□□□□ 0.86
MRPL55-231ENST00000492170 SBF1O95248 1867 aa20.4■□□□□ 0.86
MRPL55-231ENST00000492170 NEFMP07197 916 aa20.4■□□□□ 0.86
MRPL55-231ENST00000492170 SNRPA1P09661 255 aaKnown RBP20.4■□□□□ 0.86
MRPL55-231ENST00000492170 LMNB1P20700 586 aa20.4■□□□□ 0.86
MRPL55-231ENST00000492170 PDE6BP35913 854 aa20.4■□□□□ 0.86
MRPL55-231ENST00000492170 APLP1P51693 650 aa20.4■□□□□ 0.86
MRPL55-231ENST00000492170 PRR5LQ6MZQ0 368 aa20.4■□□□□ 0.86
MRPL55-231ENST00000492170 SETDB2Q96T68 719 aa20.4■□□□□ 0.86
MRPL55-231ENST00000492170 USP16Q9Y5T5 823 aa20.4■□□□□ 0.86
MRPL55-231ENST00000492170 DCTN1Q14203 1278 aa20.39■□□□□ 0.85
MRPL55-231ENST00000492170 CNBD1Q8NA66 436 aa20.39■□□□□ 0.85
MRPL55-231ENST00000492170 RBM46Q8TBY0 533 aaKnown RBP20.39■□□□□ 0.85
MRPL55-231ENST00000492170 ZNF622Q969S3 477 aaKnown RBP eCLIP20.39■□□□□ 0.85
MRPL55-231ENST00000492170 BCORQ6W2J9 1755 aa20.38■□□□□ 0.85
MRPL55-231ENST00000492170 ANKRD31Q8N7Z5 1873 aa20.37■□□□□ 0.85
MRPL55-231ENST00000492170 PRAMEF22A3QJZ6 481 aa20.37■□□□□ 0.85
MRPL55-231ENST00000492170 PIP4K2AP48426 406 aaPredicted RBP20.37■□□□□ 0.85
MRPL55-231ENST00000492170 ST5P78524 1137 aa20.37■□□□□ 0.85
MRPL55-231ENST00000492170 TNRC6CQ9HCJ0 1690 aaKnown RBP20.37■□□□□ 0.85
MRPL55-231ENST00000492170 CCDC24Q8N4L8 307 aa20.36■□□□□ 0.85
MRPL55-231ENST00000492170 ZNF652Q9Y2D9 606 aa20.36■□□□□ 0.85
MRPL55-231ENST00000492170 NFKBIEO00221 500 aa20.35■□□□□ 0.85
MRPL55-231ENST00000492170 TAF7Q15545 349 aaPredicted RBP20.35■□□□□ 0.85
MRPL55-231ENST00000492170 CLEC4GQ6UXB4 293 aa20.35■□□□□ 0.85
MRPL55-231ENST00000492170 RRAGCQ9HB90 399 aa20.35■□□□□ 0.85
MRPL55-231ENST00000492170 COL11A2P13942 1736 aaPredicted RBP20.35■□□□□ 0.85
MRPL55-231ENST00000492170 FSTL1Q12841 308 aa20.34■□□□□ 0.85
MRPL55-231ENST00000492170 C21orf2O43822 256 aa20.33■□□□□ 0.85
MRPL55-231ENST00000492170 PRELPP51888 382 aa20.33■□□□□ 0.85
MRPL55-231ENST00000492170 NBPF5PQ86XG9 351 aaPredicted RBP20.33■□□□□ 0.85
MRPL55-231ENST00000492170 PNISRQ8TF01 805 aaKnown RBP20.33■□□□□ 0.85
MRPL55-231ENST00000492170 CNKSR1Q969H4 720 aa20.33■□□□□ 0.85
MRPL55-231ENST00000492170 GLTPD2A6NH11 291 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms