RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 DCTN1Q14203 1278 aa19.94■□□□□ 0.78
TOM1-215ENST00000491987 FMNL2Q96PY5 1086 aa19.94■□□□□ 0.78
TOM1-215ENST00000491987 KIF13BQ9NQT8 1826 aa19.93■□□□□ 0.78
TOM1-215ENST00000491987 ZPR1O75312 459 aa19.93■□□□□ 0.78
TOM1-215ENST00000491987 NEFMP07197 916 aa19.93■□□□□ 0.78
TOM1-215ENST00000491987 USPL1Q5W0Q7 1092 aa19.93■□□□□ 0.78
TOM1-215ENST00000491987 GOLGB1Q14789 3259 aaKnown RBP19.93■□□□□ 0.78
TOM1-215ENST00000491987 PXDNLA1KZ92 1463 aa19.92■□□□□ 0.78
TOM1-215ENST00000491987 HTATSF1O43719 755 aaKnown RBP19.92■□□□□ 0.78
TOM1-215ENST00000491987 KIAA1551Q9HCM1 1747 aa19.92■□□□□ 0.78
TOM1-215ENST00000491987 DDR1Q08345 913 aa19.91■□□□□ 0.78
TOM1-215ENST00000491987 ZNF784Q8NCA9 323 aaPredicted RBP19.91■□□□□ 0.78
TOM1-215ENST00000491987 PLEKHF1Q96S99 279 aa19.91■□□□□ 0.78
TOM1-215ENST00000491987 TEX13AQ9BXU3 409 aaPredicted RBP19.9■□□□□ 0.78
TOM1-215ENST00000491987 NARFQ9UHQ1 456 aa19.9■□□□□ 0.78
TOM1-215ENST00000491987 TGFB2P61812 414 aa19.89■□□□□ 0.77
TOM1-215ENST00000491987 N4BP2Q86UW6 1770 aaPredicted RBP19.89■□□□□ 0.77
TOM1-215ENST00000491987 MYBBP1AQ9BQG0 1328 aaKnown RBP19.89■□□□□ 0.77
TOM1-215ENST00000491987 MAPK8IP3Q9UPT6 1336 aa19.88■□□□□ 0.77
TOM1-215ENST00000491987 TM4SF1P30408 202 aa19.88■□□□□ 0.77
TOM1-215ENST00000491987 BCL2L12Q9HB09 334 aa19.88■□□□□ 0.77
TOM1-215ENST00000491987 ZNF330Q9Y3S2 320 aaPredicted RBP19.88■□□□□ 0.77
TOM1-215ENST00000491987 DLG5Q8TDM6 1919 aa19.88■□□□□ 0.77
TOM1-215ENST00000491987 A0A0G2JLW4 131 aa19.87■□□□□ 0.77
TOM1-215ENST00000491987 POLRMTO00411 1230 aaKnown RBP19.87■□□□□ 0.77
TOM1-215ENST00000491987 A1BGP04217 495 aa19.87■□□□□ 0.77
TOM1-215ENST00000491987 EIF5P55010 431 aaKnown RBP19.87■□□□□ 0.77
TOM1-215ENST00000491987 NFE2L2Q16236 605 aa19.87■□□□□ 0.77
TOM1-215ENST00000491987 PNNQ9H307 717 aaKnown RBP19.87■□□□□ 0.77
TOM1-215ENST00000491987 DPEP1P16444 411 aa19.86■□□□□ 0.77
TOM1-215ENST00000491987 TAF7Q15545 349 aaPredicted RBP19.86■□□□□ 0.77
TOM1-215ENST00000491987 A0A087WZG4 1122 aa19.85■□□□□ 0.77
TOM1-215ENST00000491987 PRAMEF22A3QJZ6 481 aa19.85■□□□□ 0.77
TOM1-215ENST00000491987 IL6STP40189 918 aaPredicted RBP19.85■□□□□ 0.77
TOM1-215ENST00000491987 NFIXQ14938 502 aa19.85■□□□□ 0.77
TOM1-215ENST00000491987 USP16Q9Y5T5 823 aa19.85■□□□□ 0.77
TOM1-215ENST00000491987 MIS18AQ9NYP9 233 aa19.84■□□□□ 0.77
TOM1-215ENST00000491987 SCN7AQ01118 1682 aa19.84■□□□□ 0.77
TOM1-215ENST00000491987 SNRPA1P09661 255 aaKnown RBP19.83■□□□□ 0.77
TOM1-215ENST00000491987 PIP4K2AP48426 406 aaPredicted RBP19.83■□□□□ 0.77
TOM1-215ENST00000491987 THUMPD2Q9BTF0 503 aaKnown RBP19.83■□□□□ 0.77
TOM1-215ENST00000491987 TBC1D2BQ9UPU7 963 aa19.83■□□□□ 0.77
TOM1-215ENST00000491987 BCS1LQ9Y276 419 aa19.83■□□□□ 0.77
TOM1-215ENST00000491987 KDM3BQ7LBC6 1761 aa19.81■□□□□ 0.76
TOM1-215ENST00000491987 BICDL1Q6ZP65 573 aa19.81■□□□□ 0.76
TOM1-215ENST00000491987 NPM2Q86SE8 214 aaKnown RBP19.81■□□□□ 0.76
TOM1-215ENST00000491987 NRXN2Q9P2S2 1712 aa19.81■□□□□ 0.76
TOM1-215ENST00000491987 AFDNP55196 1824 aaKnown RBP19.81■□□□□ 0.76
TOM1-215ENST00000491987 SERPINB2P05120 415 aa19.8■□□□□ 0.76
TOM1-215ENST00000491987 KCNA3P22001 575 aa19.8■□□□□ 0.76
TOM1-215ENST00000491987 CHRNA5P30532 468 aa19.8■□□□□ 0.76
TOM1-215ENST00000491987 ZEB1P37275 1124 aaPredicted RBP19.8■□□□□ 0.76
TOM1-215ENST00000491987 PNISRQ8TF01 805 aaKnown RBP19.8■□□□□ 0.76
TOM1-215ENST00000491987 BRCA1P38398 1863 aaKnown RBP19.79■□□□□ 0.76
TOM1-215ENST00000491987 TBC1D9BQ66K14 1250 aa19.79■□□□□ 0.76
TOM1-215ENST00000491987 PRKRIP1Q9H875 184 aaPredicted RBP19.79■□□□□ 0.76
TOM1-215ENST00000491987 ATP10DQ9P241 1426 aa19.78■□□□□ 0.76
TOM1-215ENST00000491987 LAMB4A4D0S4 1761 aa19.78■□□□□ 0.76
TOM1-215ENST00000491987 RIPK4P57078 832 aa19.78■□□□□ 0.76
TOM1-215ENST00000491987 WDR43Q15061 677 aaKnown RBP eCLIP19.78■□□□□ 0.76
TOM1-215ENST00000491987 DZIP3Q86Y13 1208 aaKnown RBP19.78■□□□□ 0.76
TOM1-215ENST00000491987 PIM2Q9P1W9 311 aa19.78■□□□□ 0.76
TOM1-215ENST00000491987 BCORQ6W2J9 1755 aa19.78■□□□□ 0.76
TOM1-215ENST00000491987 CAMTA2O94983 1202 aa19.77■□□□□ 0.76
TOM1-215ENST00000491987 CCDC146Q8IYE0 955 aa19.77■□□□□ 0.76
TOM1-215ENST00000491987 CARMIL3Q8ND23 1372 aa19.77■□□□□ 0.76
TOM1-215ENST00000491987 ADCY9O60503 1353 aa19.76■□□□□ 0.75
TOM1-215ENST00000491987 NBPF26B4DH59 902 aa19.76■□□□□ 0.75
TOM1-215ENST00000491987 NBPF10Q6P3W6 841 aaKnown RBP19.76■□□□□ 0.75
TOM1-215ENST00000491987 NBPF15Q8N660 670 aa19.76■□□□□ 0.75
TOM1-215ENST00000491987 TMPOP42166 694 aaKnown RBP19.75■□□□□ 0.75
TOM1-215ENST00000491987 EIF4A1P60842 406 aaKnown RBP19.75■□□□□ 0.75
TOM1-215ENST00000491987 DALRD3Q5D0E6 543 aaKnown RBP19.75■□□□□ 0.75
TOM1-215ENST00000491987 ARHGAP27Q6ZUM4 889 aa19.75■□□□□ 0.75
TOM1-215ENST00000491987 RRP7AQ9Y3A4 280 aaKnown RBP19.75■□□□□ 0.75
TOM1-215ENST00000491987 GIGYF1O75420 1035 aaPredicted RBP19.73■□□□□ 0.75
TOM1-215ENST00000491987 LMOD3Q0VAK6 560 aa19.73■□□□□ 0.75
TOM1-215ENST00000491987 TSPYL4Q9UJ04 414 aa19.73■□□□□ 0.75
TOM1-215ENST00000491987 ARFGEF1Q9Y6D6 1849 aa19.73■□□□□ 0.75
TOM1-215ENST00000491987 NEUROD2Q15784 382 aa19.72■□□□□ 0.75
TOM1-215ENST00000491987 PRR5LQ6MZQ0 368 aa19.72■□□□□ 0.75
TOM1-215ENST00000491987 CCDC24Q8N4L8 307 aa19.72■□□□□ 0.75
TOM1-215ENST00000491987 RUNDC1Q96C34 613 aa19.72■□□□□ 0.75
TOM1-215ENST00000491987 SETDB2Q96T68 719 aa19.72■□□□□ 0.75
TOM1-215ENST00000491987 ADAMTS8Q9UP79 889 aa19.72■□□□□ 0.75
TOM1-215ENST00000491987 DLEC1Q9Y238 1755 aa19.71■□□□□ 0.75
TOM1-215ENST00000491987 C2CD5Q86YS7 1000 aa19.71■□□□□ 0.75
TOM1-215ENST00000491987 ZNF526Q8TF50 670 aaPredicted RBP19.71■□□□□ 0.75
TOM1-215ENST00000491987 ZNF652Q9Y2D9 606 aa19.7■□□□□ 0.74
TOM1-215ENST00000491987 ANKRD31Q8N7Z5 1873 aa19.69■□□□□ 0.74
TOM1-215ENST00000491987 NPHP1O15259 732 aa19.69■□□□□ 0.74
TOM1-215ENST00000491987 CLEC4GQ6UXB4 293 aa19.69■□□□□ 0.74
TOM1-215ENST00000491987 NGEFQ8N5V2 710 aa19.69■□□□□ 0.74
TOM1-215ENST00000491987 H0YIN7 160 aa19.68■□□□□ 0.74
TOM1-215ENST00000491987 CNBD1Q8NA66 436 aa19.68■□□□□ 0.74
TOM1-215ENST00000491987 GPBP1L1Q9HC44 474 aaPredicted RBP19.68■□□□□ 0.74
TOM1-215ENST00000491987 COL11A2P13942 1736 aaPredicted RBP19.68■□□□□ 0.74
TOM1-215ENST00000491987 MYL6BP14649 208 aa19.67■□□□□ 0.74
TOM1-215ENST00000491987 BRIP1Q9BX63 1249 aa19.67■□□□□ 0.74
TOM1-215ENST00000491987 TRIM35Q9UPQ4 493 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms