RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 NARFQ9UHQ1 456 aa11.26□□□□□ -0.61
SMARCB1-207ENST00000491967 PARP3Q9Y6F1 533 aa11.26□□□□□ -0.61
SMARCB1-207ENST00000491967 DPEP1P16444 411 aa11.25□□□□□ -0.61
SMARCB1-207ENST00000491967 TEX13AQ9BXU3 409 aaPredicted RBP11.25□□□□□ -0.61
SMARCB1-207ENST00000491967 BCL2L12Q9HB09 334 aa11.25□□□□□ -0.61
SMARCB1-207ENST00000491967 ZBTB1Q9Y2K1 713 aa11.25□□□□□ -0.61
SMARCB1-207ENST00000491967 AFDNP55196 1824 aaKnown RBP11.25□□□□□ -0.61
SMARCB1-207ENST00000491967 ATP10DQ9P241 1426 aa11.25□□□□□ -0.61
SMARCB1-207ENST00000491967 PRKAR2BP31323 418 aa11.24□□□□□ -0.61
SMARCB1-207ENST00000491967 USPL1Q5W0Q7 1092 aa11.24□□□□□ -0.61
SMARCB1-207ENST00000491967 NUDCQ9Y266 331 aa11.24□□□□□ -0.61
SMARCB1-207ENST00000491967 COL15A1P39059 1388 aa11.24□□□□□ -0.61
SMARCB1-207ENST00000491967 HEG1Q9ULI3 1381 aa11.24□□□□□ -0.61
SMARCB1-207ENST00000491967 HTATSF1O43719 755 aaKnown RBP11.23□□□□□ -0.61
SMARCB1-207ENST00000491967 ZPR1O75312 459 aa11.23□□□□□ -0.61
SMARCB1-207ENST00000491967 STARD3NLO95772 234 aa11.23□□□□□ -0.61
SMARCB1-207ENST00000491967 NFIXQ14938 502 aa11.23□□□□□ -0.61
SMARCB1-207ENST00000491967 GIGYF1O75420 1035 aaPredicted RBP11.22□□□□□ -0.61
SMARCB1-207ENST00000491967 SBF1O95248 1867 aa11.22□□□□□ -0.61
SMARCB1-207ENST00000491967 TEFQ10587 303 aa11.22□□□□□ -0.61
SMARCB1-207ENST00000491967 TTC5Q8N0Z6 440 aa11.22□□□□□ -0.61
SMARCB1-207ENST00000491967 PIM2Q9P1W9 311 aa11.22□□□□□ -0.61
SMARCB1-207ENST00000491967 DLEC1Q9Y238 1755 aa11.21□□□□□ -0.61
SMARCB1-207ENST00000491967 A0A087WZG4 1122 aa11.21□□□□□ -0.61
SMARCB1-207ENST00000491967 KCNQ3O43525 872 aa11.21□□□□□ -0.61
SMARCB1-207ENST00000491967 U2AF1L5P0DN76 240 aaPredicted RBP11.21□□□□□ -0.61
SMARCB1-207ENST00000491967 IL6STP40189 918 aaPredicted RBP11.21□□□□□ -0.61
SMARCB1-207ENST00000491967 U2AF1Q01081 240 aaKnown RBP eCLIP11.21□□□□□ -0.61
SMARCB1-207ENST00000491967 FMNL2Q96PY5 1086 aa11.21□□□□□ -0.61
SMARCB1-207ENST00000491967 WWC3Q9ULE0 1092 aa11.21□□□□□ -0.61
SMARCB1-207ENST00000491967 BCS1LQ9Y276 419 aa11.21□□□□□ -0.61
SMARCB1-207ENST00000491967 CNGB1Q14028 1251 aaPredicted RBP11.2□□□□□ -0.62
SMARCB1-207ENST00000491967 PLEKHF1Q96S99 279 aa11.2□□□□□ -0.62
SMARCB1-207ENST00000491967 DLG5Q8TDM6 1919 aa11.19□□□□□ -0.62
SMARCB1-207ENST00000491967 BTBD11A6QL63 1104 aa11.19□□□□□ -0.62
SMARCB1-207ENST00000491967 RGL2O15211 777 aa11.19□□□□□ -0.62
SMARCB1-207ENST00000491967 SERPINB2P05120 415 aa11.19□□□□□ -0.62
SMARCB1-207ENST00000491967 CANXP27824 592 aaKnown RBP11.19□□□□□ -0.62
SMARCB1-207ENST00000491967 DALRD3Q5D0E6 543 aaKnown RBP11.19□□□□□ -0.62
SMARCB1-207ENST00000491967 GPBP1L1Q9HC44 474 aaPredicted RBP11.19□□□□□ -0.62
SMARCB1-207ENST00000491967 SCN7AQ01118 1682 aa11.19□□□□□ -0.62
SMARCB1-207ENST00000491967 KIF3CO14782 793 aa11.18□□□□□ -0.62
SMARCB1-207ENST00000491967 A1BGP04217 495 aa11.18□□□□□ -0.62
SMARCB1-207ENST00000491967 CHRNA5P30532 468 aa11.18□□□□□ -0.62
SMARCB1-207ENST00000491967 ARHGAP27Q6ZUM4 889 aa11.18□□□□□ -0.62
SMARCB1-207ENST00000491967 MCM10Q7L590 875 aa11.18□□□□□ -0.62
SMARCB1-207ENST00000491967 USP16Q9Y5T5 823 aa11.18□□□□□ -0.62
SMARCB1-207ENST00000491967 ANKRD31Q8N7Z5 1873 aa11.18□□□□□ -0.62
SMARCB1-207ENST00000491967 CAMTA2O94983 1202 aa11.17□□□□□ -0.62
SMARCB1-207ENST00000491967 SNRPA1P09661 255 aaKnown RBP11.17□□□□□ -0.62
SMARCB1-207ENST00000491967 BCORQ6W2J9 1755 aa11.17□□□□□ -0.62
SMARCB1-207ENST00000491967 TAF7Q15545 349 aaPredicted RBP11.16□□□□□ -0.62
SMARCB1-207ENST00000491967 TBC1D9BQ66K14 1250 aa11.16□□□□□ -0.62
SMARCB1-207ENST00000491967 CLEC4GQ6UXB4 293 aa11.16□□□□□ -0.62
SMARCB1-207ENST00000491967 RTF1Q92541 710 aaKnown RBP11.16□□□□□ -0.62
SMARCB1-207ENST00000491967 BRIP1Q9BX63 1249 aa11.16□□□□□ -0.62
SMARCB1-207ENST00000491967 TBC1D2BQ9UPU7 963 aa11.16□□□□□ -0.62
SMARCB1-207ENST00000491967 CARMIL3Q8ND23 1372 aa11.16□□□□□ -0.62
SMARCB1-207ENST00000491967 PRAMEF22A3QJZ6 481 aa11.15□□□□□ -0.62
SMARCB1-207ENST00000491967 NBPF26B4DH59 902 aa11.15□□□□□ -0.62
SMARCB1-207ENST00000491967 DCTN1Q14203 1278 aa11.15□□□□□ -0.62
SMARCB1-207ENST00000491967 NBPF10Q6P3W6 841 aaKnown RBP11.15□□□□□ -0.62
SMARCB1-207ENST00000491967 NBPF15Q8N660 670 aa11.15□□□□□ -0.62
SMARCB1-207ENST00000491967 PDZRN3Q9UPQ7 1066 aa11.15□□□□□ -0.62
SMARCB1-207ENST00000491967 KDM3BQ7LBC6 1761 aa11.15□□□□□ -0.62
SMARCB1-207ENST00000491967 CEP350Q5VT06 3117 aa11.14□□□□□ -0.63
SMARCB1-207ENST00000491967 RALBP1Q15311 655 aa11.14□□□□□ -0.63
SMARCB1-207ENST00000491967 C9orf131Q5VYM1 1079 aa11.14□□□□□ -0.63
SMARCB1-207ENST00000491967 PRR5LQ6MZQ0 368 aa11.14□□□□□ -0.63
SMARCB1-207ENST00000491967 TTLL6Q8N841 843 aa11.14□□□□□ -0.63
SMARCB1-207ENST00000491967 ZC3H4Q9UPT8 1303 aaKnown RBP11.13□□□□□ -0.63
SMARCB1-207ENST00000491967 KLRG2A4D1S0 409 aaPredicted RBP11.13□□□□□ -0.63
SMARCB1-207ENST00000491967 H0YIN7 160 aa11.13□□□□□ -0.63
SMARCB1-207ENST00000491967 PRELPP51888 382 aa11.13□□□□□ -0.63
SMARCB1-207ENST00000491967 NFE2L2Q16236 605 aa11.13□□□□□ -0.63
SMARCB1-207ENST00000491967 DZIP3Q86Y13 1208 aaKnown RBP11.13□□□□□ -0.63
SMARCB1-207ENST00000491967 PNISRQ8TF01 805 aaKnown RBP11.13□□□□□ -0.63
SMARCB1-207ENST00000491967 FER1L6Q2WGJ9 1857 aa11.12□□□□□ -0.63
SMARCB1-207ENST00000491967 CCDC88AQ3V6T2 1871 aa11.12□□□□□ -0.63
SMARCB1-207ENST00000491967 TOMM70O94826 608 aa11.12□□□□□ -0.63
SMARCB1-207ENST00000491967 HSPA6P17066 643 aa11.12□□□□□ -0.63
SMARCB1-207ENST00000491967 PDE6BP35913 854 aa11.12□□□□□ -0.63
SMARCB1-207ENST00000491967 BICDL1Q6ZP65 573 aa11.12□□□□□ -0.63
SMARCB1-207ENST00000491967 C2CD5Q86YS7 1000 aa11.12□□□□□ -0.63
SMARCB1-207ENST00000491967 ZNF526Q8TF50 670 aaPredicted RBP11.12□□□□□ -0.63
SMARCB1-207ENST00000491967 SETDB2Q96T68 719 aa11.12□□□□□ -0.63
SMARCB1-207ENST00000491967 PNNQ9H307 717 aaKnown RBP11.12□□□□□ -0.63
SMARCB1-207ENST00000491967 LAMB4A4D0S4 1761 aa11.12□□□□□ -0.63
SMARCB1-207ENST00000491967 COL11A2P13942 1736 aaPredicted RBP11.12□□□□□ -0.63
SMARCB1-207ENST00000491967 DICER1Q9UPY3 1922 aaKnown RBP11.11□□□□□ -0.63
SMARCB1-207ENST00000491967 ARFGEF2Q9Y6D5 1785 aa11.11□□□□□ -0.63
SMARCB1-207ENST00000491967 SRGNP10124 158 aa11.11□□□□□ -0.63
SMARCB1-207ENST00000491967 EIF4A1P60842 406 aaKnown RBP11.11□□□□□ -0.63
SMARCB1-207ENST00000491967 NMRK2Q9NPI5 230 aa11.11□□□□□ -0.63
SMARCB1-207ENST00000491967 MIS18AQ9NYP9 233 aa11.11□□□□□ -0.63
SMARCB1-207ENST00000491967 SLX4Q8IY92 1834 aa11.11□□□□□ -0.63
SMARCB1-207ENST00000491967 LMNB1P20700 586 aa11.1□□□□□ -0.63
SMARCB1-207ENST00000491967 PIP4K2AP48426 406 aaPredicted RBP11.1□□□□□ -0.63
SMARCB1-207ENST00000491967 STYK1Q6J9G0 422 aa11.1□□□□□ -0.63
SMARCB1-207ENST00000491967 C7orf43Q8WVR3 580 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms