RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 DNAJC10Q8IXB1 793 aa11.71□□□□□ -0.53
NUP50-217ENST00000491860 WWC3Q9ULE0 1092 aa11.71□□□□□ -0.53
NUP50-217ENST00000491860 KCPQ6ZWJ8 1503 aa11.7□□□□□ -0.54
NUP50-217ENST00000491860 FSTL1Q12841 308 aa11.7□□□□□ -0.54
NUP50-217ENST00000491860 NPM2Q86SE8 214 aaKnown RBP11.7□□□□□ -0.54
NUP50-217ENST00000491860 NARFQ9UHQ1 456 aa11.7□□□□□ -0.54
NUP50-217ENST00000491860 COL15A1P39059 1388 aa11.69□□□□□ -0.54
NUP50-217ENST00000491860 FCHSD2O94868 740 aa11.69□□□□□ -0.54
NUP50-217ENST00000491860 NEFMP07197 916 aa11.69□□□□□ -0.54
NUP50-217ENST00000491860 RTF1Q92541 710 aaKnown RBP11.69□□□□□ -0.54
NUP50-217ENST00000491860 KLRG1Q96E93 195 aa11.69□□□□□ -0.54
NUP50-217ENST00000491860 NMRK2Q9NPI5 230 aa11.69□□□□□ -0.54
NUP50-217ENST00000491860 PIM2Q9P1W9 311 aa11.69□□□□□ -0.54
NUP50-217ENST00000491860 BCS1LQ9Y276 419 aa11.69□□□□□ -0.54
NUP50-217ENST00000491860 SIPA1L3O60292 1781 aaPredicted RBP11.69□□□□□ -0.54
NUP50-217ENST00000491860 CEMIPQ8WUJ3 1361 aa11.68□□□□□ -0.54
NUP50-217ENST00000491860 A0A0G2JLW4 131 aa11.68□□□□□ -0.54
NUP50-217ENST00000491860 HTATSF1O43719 755 aaKnown RBP11.68□□□□□ -0.54
NUP50-217ENST00000491860 TM4SF1P30408 202 aa11.68□□□□□ -0.54
NUP50-217ENST00000491860 SLC39A6Q13433 755 aa11.68□□□□□ -0.54
NUP50-217ENST00000491860 CNGB1Q14028 1251 aaPredicted RBP11.68□□□□□ -0.54
NUP50-217ENST00000491860 FKBP8Q14318 412 aa11.68□□□□□ -0.54
NUP50-217ENST00000491860 ZNF790Q6PG37 636 aa11.68□□□□□ -0.54
NUP50-217ENST00000491860 FMNL2Q96PY5 1086 aa11.68□□□□□ -0.54
NUP50-217ENST00000491860 TNRC6CQ9HCJ0 1690 aaKnown RBP11.68□□□□□ -0.54
NUP50-217ENST00000491860 HEG1Q9ULI3 1381 aa11.67□□□□□ -0.54
NUP50-217ENST00000491860 POLRMTO00411 1230 aaKnown RBP11.67□□□□□ -0.54
NUP50-217ENST00000491860 U2AF1L5P0DN76 240 aaPredicted RBP11.67□□□□□ -0.54
NUP50-217ENST00000491860 DPEP1P16444 411 aa11.67□□□□□ -0.54
NUP50-217ENST00000491860 PPP2R1AP30153 589 aa11.67□□□□□ -0.54
NUP50-217ENST00000491860 PRKAR2BP31323 418 aa11.67□□□□□ -0.54
NUP50-217ENST00000491860 U2AF1Q01081 240 aaKnown RBP eCLIP11.67□□□□□ -0.54
NUP50-217ENST00000491860 DALRD3Q5D0E6 543 aaKnown RBP11.67□□□□□ -0.54
NUP50-217ENST00000491860 ARHGAP27Q6ZUM4 889 aa11.67□□□□□ -0.54
NUP50-217ENST00000491860 RSPH6AQ9H0K4 717 aa11.67□□□□□ -0.54
NUP50-217ENST00000491860 PNNQ9H307 717 aaKnown RBP11.67□□□□□ -0.54
NUP50-217ENST00000491860 SRP68Q9UHB9 627 aaKnown RBP11.67□□□□□ -0.54
NUP50-217ENST00000491860 PDZRN3Q9UPQ7 1066 aa11.67□□□□□ -0.54
NUP50-217ENST00000491860 ZBTB1Q9Y2K1 713 aa11.67□□□□□ -0.54
NUP50-217ENST00000491860 KCNA3P22001 575 aa11.66□□□□□ -0.54
NUP50-217ENST00000491860 IL6STP40189 918 aaPredicted RBP11.66□□□□□ -0.54
NUP50-217ENST00000491860 USPL1Q5W0Q7 1092 aa11.66□□□□□ -0.54
NUP50-217ENST00000491860 IL17REQ8NFR9 667 aa11.66□□□□□ -0.54
NUP50-217ENST00000491860 KDM2BQ8NHM5 1336 aa11.65□□□□□ -0.54
NUP50-217ENST00000491860 BTBD11A6QL63 1104 aa11.65□□□□□ -0.54
NUP50-217ENST00000491860 CANXP27824 592 aaKnown RBP11.65□□□□□ -0.54
NUP50-217ENST00000491860 EIF5P55010 431 aaKnown RBP11.65□□□□□ -0.54
NUP50-217ENST00000491860 DDR1Q08345 913 aa11.65□□□□□ -0.54
NUP50-217ENST00000491860 COL13A1Q5TAT6 717 aaPredicted RBP11.65□□□□□ -0.54
NUP50-217ENST00000491860 C9orf131Q5VYM1 1079 aa11.65□□□□□ -0.54
NUP50-217ENST00000491860 C16orf71Q8IYS4 520 aaPredicted RBP11.65□□□□□ -0.54
NUP50-217ENST00000491860 NRXN2Q9P2S2 1712 aa11.65□□□□□ -0.54
NUP50-217ENST00000491860 SBF1O95248 1867 aa11.64□□□□□ -0.55
NUP50-217ENST00000491860 ZNF496Q96IT1 587 aaPredicted RBP11.64□□□□□ -0.55
NUP50-217ENST00000491860 AFDNP55196 1824 aaKnown RBP11.64□□□□□ -0.55
NUP50-217ENST00000491860 PCNTO95613 3336 aa11.63□□□□□ -0.55
NUP50-217ENST00000491860 NFIXQ14938 502 aa11.63□□□□□ -0.55
NUP50-217ENST00000491860 PHACTR3Q96KR7 559 aa11.63□□□□□ -0.55
NUP50-217ENST00000491860 ZC3H4Q9UPT8 1303 aaKnown RBP11.62□□□□□ -0.55
NUP50-217ENST00000491860 RGL2O15211 777 aa11.62□□□□□ -0.55
NUP50-217ENST00000491860 SERPINB2P05120 415 aa11.62□□□□□ -0.55
NUP50-217ENST00000491860 SNRPA1P09661 255 aaKnown RBP11.62□□□□□ -0.55
NUP50-217ENST00000491860 PRELPP51888 382 aa11.62□□□□□ -0.55
NUP50-217ENST00000491860 PNISRQ8TF01 805 aaKnown RBP11.62□□□□□ -0.55
NUP50-217ENST00000491860 CARMIL3Q8ND23 1372 aa11.62□□□□□ -0.55
NUP50-217ENST00000491860 SCN7AQ01118 1682 aa11.62□□□□□ -0.55
NUP50-217ENST00000491860 DLEC1Q9Y238 1755 aa11.62□□□□□ -0.55
NUP50-217ENST00000491860 H0YIN7 160 aa11.61□□□□□ -0.55
NUP50-217ENST00000491860 HTRA3P83110 453 aa11.61□□□□□ -0.55
NUP50-217ENST00000491860 TNS4Q8IZW8 715 aa11.61□□□□□ -0.55
NUP50-217ENST00000491860 SMC1BQ8NDV3 1235 aa11.61□□□□□ -0.55
NUP50-217ENST00000491860 BCL2L12Q9HB09 334 aa11.61□□□□□ -0.55
NUP50-217ENST00000491860 ZNF652Q9Y2D9 606 aa11.61□□□□□ -0.55
NUP50-217ENST00000491860 PDE6BP35913 854 aa11.6□□□□□ -0.55
NUP50-217ENST00000491860 CLEC4GQ6UXB4 293 aa11.6□□□□□ -0.55
NUP50-217ENST00000491860 TTLL6Q8N841 843 aa11.6□□□□□ -0.55
NUP50-217ENST00000491860 RNF181Q9P0P0 153 aa11.6□□□□□ -0.55
NUP50-217ENST00000491860 NPHP1O15259 732 aa11.59□□□□□ -0.55
NUP50-217ENST00000491860 CHRNA5P30532 468 aa11.59□□□□□ -0.55
NUP50-217ENST00000491860 ST5P78524 1137 aa11.59□□□□□ -0.55
NUP50-217ENST00000491860 RALBP1Q15311 655 aa11.59□□□□□ -0.55
NUP50-217ENST00000491860 TAF7Q15545 349 aaPredicted RBP11.59□□□□□ -0.55
NUP50-217ENST00000491860 SETDB2Q96T68 719 aa11.59□□□□□ -0.55
NUP50-217ENST00000491860 BRIP1Q9BX63 1249 aa11.59□□□□□ -0.55
NUP50-217ENST00000491860 RRAGCQ9HB90 399 aa11.59□□□□□ -0.55
NUP50-217ENST00000491860 ZNF330Q9Y3S2 320 aaPredicted RBP11.59□□□□□ -0.55
NUP50-217ENST00000491860 MAPK8IP3Q9UPT6 1336 aa11.59□□□□□ -0.55
NUP50-217ENST00000491860 A1BGP04217 495 aa11.58□□□□□ -0.56
NUP50-217ENST00000491860 MCM10Q7L590 875 aa11.58□□□□□ -0.56
NUP50-217ENST00000491860 DZIP3Q86Y13 1208 aaKnown RBP11.58□□□□□ -0.56
NUP50-217ENST00000491860 C2CD5Q86YS7 1000 aa11.58□□□□□ -0.56
NUP50-217ENST00000491860 BCORQ6W2J9 1755 aa11.58□□□□□ -0.56
NUP50-217ENST00000491860 SOGA3Q5TF21 947 aa11.57□□□□□ -0.56
NUP50-217ENST00000491860 TBC1D9BQ66K14 1250 aa11.57□□□□□ -0.56
NUP50-217ENST00000491860 BICDL1Q6ZP65 573 aa11.57□□□□□ -0.56
NUP50-217ENST00000491860 CNBD1Q8NA66 436 aa11.57□□□□□ -0.56
NUP50-217ENST00000491860 TBC1D2BQ9UPU7 963 aa11.57□□□□□ -0.56
NUP50-217ENST00000491860 DLG5Q8TDM6 1919 aa11.56□□□□□ -0.56
NUP50-217ENST00000491860 CAMTA2O94983 1202 aa11.56□□□□□ -0.56
NUP50-217ENST00000491860 LMNB1P20700 586 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms