RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 CCDC87Q9NVE4 849 aa14.81□□□□□ -0.04
TMEM39A-211ENST00000491685 ZBTB1Q9Y2K1 713 aa14.81□□□□□ -0.04
TMEM39A-211ENST00000491685 PARP3Q9Y6F1 533 aa14.8□□□□□ -0.04
TMEM39A-211ENST00000491685 COL15A1P39059 1388 aa14.8□□□□□ -0.04
TMEM39A-211ENST00000491685 KCNA3P22001 575 aa14.79□□□□□ -0.04
TMEM39A-211ENST00000491685 TGFB2P61812 414 aa14.79□□□□□ -0.04
TMEM39A-211ENST00000491685 USPL1Q5W0Q7 1092 aa14.79□□□□□ -0.04
TMEM39A-211ENST00000491685 BCORQ6W2J9 1755 aa14.79□□□□□ -0.04
TMEM39A-211ENST00000491685 ANKRD31Q8N7Z5 1873 aa14.79□□□□□ -0.04
TMEM39A-211ENST00000491685 BCS1LQ9Y276 419 aa14.79□□□□□ -0.04
TMEM39A-211ENST00000491685 SBF1O95248 1867 aa14.78□□□□□ -0.04
TMEM39A-211ENST00000491685 POLRMTO00411 1230 aaKnown RBP14.78□□□□□ -0.04
TMEM39A-211ENST00000491685 DNAJC5GQ8N7S2 189 aa14.78□□□□□ -0.04
TMEM39A-211ENST00000491685 IL17REQ8NFR9 667 aa14.78□□□□□ -0.04
TMEM39A-211ENST00000491685 DLG5Q8TDM6 1919 aa14.78□□□□□ -0.04
TMEM39A-211ENST00000491685 COL11A2P13942 1736 aaPredicted RBP14.78□□□□□ -0.04
TMEM39A-211ENST00000491685 PHACTR3Q96KR7 559 aa14.77□□□□□ -0.05
TMEM39A-211ENST00000491685 BCL2L12Q9HB09 334 aa14.77□□□□□ -0.05
TMEM39A-211ENST00000491685 TOMM70O94826 608 aa14.76□□□□□ -0.05
TMEM39A-211ENST00000491685 TM4SF1P30408 202 aa14.76□□□□□ -0.05
TMEM39A-211ENST00000491685 CHRNA5P30532 468 aa14.76□□□□□ -0.05
TMEM39A-211ENST00000491685 RSPH6AQ9H0K4 717 aa14.76□□□□□ -0.05
TMEM39A-211ENST00000491685 CARMIL3Q8ND23 1372 aa14.75□□□□□ -0.05
TMEM39A-211ENST00000491685 CEMIPQ8WUJ3 1361 aa14.75□□□□□ -0.05
TMEM39A-211ENST00000491685 FCHSD2O94868 740 aa14.75□□□□□ -0.05
TMEM39A-211ENST00000491685 PRKAR2BP31323 418 aa14.75□□□□□ -0.05
TMEM39A-211ENST00000491685 NFIXQ14938 502 aa14.75□□□□□ -0.05
TMEM39A-211ENST00000491685 VSIG10Q8N0Z9 540 aa14.75□□□□□ -0.05
TMEM39A-211ENST00000491685 GAS2L2Q8NHY3 880 aa14.75□□□□□ -0.05
TMEM39A-211ENST00000491685 ZNF496Q96IT1 587 aaPredicted RBP14.75□□□□□ -0.05
TMEM39A-211ENST00000491685 CACNA1SQ13698 1873 aa14.75□□□□□ -0.05
TMEM39A-211ENST00000491685 HEG1Q9ULI3 1381 aa14.74□□□□□ -0.05
TMEM39A-211ENST00000491685 GNAT3A8MTJ3 354 aa14.74□□□□□ -0.05
TMEM39A-211ENST00000491685 CANXP27824 592 aaKnown RBP14.74□□□□□ -0.05
TMEM39A-211ENST00000491685 PPP2R1AP30153 589 aa14.74□□□□□ -0.05
TMEM39A-211ENST00000491685 NARFQ9UHQ1 456 aa14.74□□□□□ -0.05
TMEM39A-211ENST00000491685 CCDC88AQ3V6T2 1871 aa14.74□□□□□ -0.05
TMEM39A-211ENST00000491685 KCNQ3O43525 872 aa14.73□□□□□ -0.05
TMEM39A-211ENST00000491685 ZPR1O75312 459 aa14.73□□□□□ -0.05
TMEM39A-211ENST00000491685 ARHGAP27Q6ZUM4 889 aa14.73□□□□□ -0.05
TMEM39A-211ENST00000491685 TTC5Q8N0Z6 440 aa14.73□□□□□ -0.05
TMEM39A-211ENST00000491685 LAMB4A4D0S4 1761 aa14.73□□□□□ -0.05
TMEM39A-211ENST00000491685 TIAM2Q8IVF5 1701 aa14.72□□□□□ -0.05
TMEM39A-211ENST00000491685 TNRC6CQ9HCJ0 1690 aaKnown RBP14.72□□□□□ -0.05
TMEM39A-211ENST00000491685 TEFQ10587 303 aa14.72□□□□□ -0.05
TMEM39A-211ENST00000491685 ZNF790Q6PG37 636 aa14.72□□□□□ -0.05
TMEM39A-211ENST00000491685 KDM3BQ7LBC6 1761 aa14.71□□□□□ -0.05
TMEM39A-211ENST00000491685 EIF5P55010 431 aaKnown RBP14.71□□□□□ -0.05
TMEM39A-211ENST00000491685 CFAP53Q96M91 514 aa14.71□□□□□ -0.05
TMEM39A-211ENST00000491685 PIM2Q9P1W9 311 aa14.71□□□□□ -0.05
TMEM39A-211ENST00000491685 PRAMEF22A3QJZ6 481 aa14.69□□□□□ -0.06
TMEM39A-211ENST00000491685 U2AF1L5P0DN76 240 aaPredicted RBP14.69□□□□□ -0.06
TMEM39A-211ENST00000491685 U2AF1Q01081 240 aaKnown RBP eCLIP14.69□□□□□ -0.063e-12■■■■□ 20.9
TMEM39A-211ENST00000491685 DALRD3Q5D0E6 543 aaKnown RBP14.69□□□□□ -0.06
TMEM39A-211ENST00000491685 MCM10Q7L590 875 aa14.69□□□□□ -0.06
TMEM39A-211ENST00000491685 JMYQ8N9B5 988 aa14.69□□□□□ -0.06
TMEM39A-211ENST00000491685 ARFGEF2Q9Y6D5 1785 aa14.69□□□□□ -0.06
TMEM39A-211ENST00000491685 STARD3NLO95772 234 aa14.68□□□□□ -0.06
TMEM39A-211ENST00000491685 A1BGP04217 495 aa14.68□□□□□ -0.06
TMEM39A-211ENST00000491685 SERPINB2P05120 415 aa14.68□□□□□ -0.06
TMEM39A-211ENST00000491685 PIP4K2AP48426 406 aaPredicted RBP14.68□□□□□ -0.06
TMEM39A-211ENST00000491685 DCTN1Q14203 1278 aa14.68□□□□□ -0.06
TMEM39A-211ENST00000491685 RALBP1Q15311 655 aa14.68□□□□□ -0.06
TMEM39A-211ENST00000491685 C9orf131Q5VYM1 1079 aa14.68□□□□□ -0.06
TMEM39A-211ENST00000491685 TBC1D9BQ66K14 1250 aa14.68□□□□□ -0.06
TMEM39A-211ENST00000491685 BICDL1Q6ZP65 573 aa14.68□□□□□ -0.06
TMEM39A-211ENST00000491685 RBM46Q8TBY0 533 aaKnown RBP14.68□□□□□ -0.06
TMEM39A-211ENST00000491685 NMRK2Q9NPI5 230 aa14.68□□□□□ -0.06
TMEM39A-211ENST00000491685 ZNF330Q9Y3S2 320 aaPredicted RBP14.68□□□□□ -0.06
TMEM39A-211ENST00000491685 PCNTO95613 3336 aa14.68□□□□□ -0.06
TMEM39A-211ENST00000491685 BTBD11A6QL63 1104 aa14.67□□□□□ -0.06
TMEM39A-211ENST00000491685 RASSF7Q02833 373 aa14.67□□□□□ -0.06
TMEM39A-211ENST00000491685 KLRG1Q96E93 195 aa14.67□□□□□ -0.06
TMEM39A-211ENST00000491685 FMNL2Q96PY5 1086 aa14.67□□□□□ -0.06
TMEM39A-211ENST00000491685 TBC1D2BQ9UPU7 963 aa14.67□□□□□ -0.06
TMEM39A-211ENST00000491685 FER1L6Q2WGJ9 1857 aa14.66□□□□□ -0.06
TMEM39A-211ENST00000491685 PRELPP51888 382 aa14.66□□□□□ -0.06
TMEM39A-211ENST00000491685 COL13A1Q5TAT6 717 aaPredicted RBP14.66□□□□□ -0.06
TMEM39A-211ENST00000491685 CCDC24Q8N4L8 307 aa14.66□□□□□ -0.06
TMEM39A-211ENST00000491685 NUDCQ9Y266 331 aa14.66□□□□□ -0.06
TMEM39A-211ENST00000491685 FSTL1Q12841 308 aa14.65□□□□□ -0.06
TMEM39A-211ENST00000491685 USP16Q9Y5T5 823 aa14.65□□□□□ -0.06
TMEM39A-211ENST00000491685 DICER1Q9UPY3 1922 aaKnown RBP14.64□□□□□ -0.07
TMEM39A-211ENST00000491685 SLX4Q8IY92 1834 aa14.64□□□□□ -0.07
TMEM39A-211ENST00000491685 A0A087WZG4 1122 aa14.64□□□□□ -0.07
TMEM39A-211ENST00000491685 ANP32CO43423 234 aa14.64□□□□□ -0.07
TMEM39A-211ENST00000491685 CAMTA2O94983 1202 aa14.64□□□□□ -0.07
TMEM39A-211ENST00000491685 IL6STP40189 918 aaPredicted RBP14.64□□□□□ -0.07
TMEM39A-211ENST00000491685 C2CD5Q86YS7 1000 aa14.64□□□□□ -0.07
TMEM39A-211ENST00000491685 RNF181Q9P0P0 153 aa14.64□□□□□ -0.07
TMEM39A-211ENST00000491685 PRR5LQ6MZQ0 368 aa14.63□□□□□ -0.07
TMEM39A-211ENST00000491685 C16orf71Q8IYS4 520 aaPredicted RBP14.63□□□□□ -0.07
TMEM39A-211ENST00000491685 TEX13AQ9BXU3 409 aaPredicted RBP14.63□□□□□ -0.07
TMEM39A-211ENST00000491685 RTF1Q92541 710 aaKnown RBP14.62□□□□□ -0.07
TMEM39A-211ENST00000491685 NUP98P52948 1817 aa14.62□□□□□ -0.07
TMEM39A-211ENST00000491685 HTRA3P83110 453 aa14.61□□□□□ -0.07
TMEM39A-211ENST00000491685 DZIP3Q86Y13 1208 aaKnown RBP14.61□□□□□ -0.07
TMEM39A-211ENST00000491685 MIS18AQ9NYP9 233 aa14.61□□□□□ -0.07
TMEM39A-211ENST00000491685 KDM2BQ8NHM5 1336 aa14.61□□□□□ -0.07
TMEM39A-211ENST00000491685 NBPF26B4DH59 902 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms