RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 BTBD11A6QL63 1104 aa11□□□□□ -0.65
LSM2-213ENST00000491421 DPEP1P16444 411 aa11□□□□□ -0.65
LSM2-213ENST00000491421 MCM10Q7L590 875 aa11□□□□□ -0.65
LSM2-213ENST00000491421 POTEDQ86YR6 584 aa11□□□□□ -0.65
LSM2-213ENST00000491421 FMNL2Q96PY5 1086 aa11□□□□□ -0.65
LSM2-213ENST00000491421 TEX13AQ9BXU3 409 aaPredicted RBP11□□□□□ -0.65
LSM2-213ENST00000491421 NARFQ9UHQ1 456 aa11□□□□□ -0.65
LSM2-213ENST00000491421 CHD4Q14839 1912 aa10.99□□□□□ -0.65
LSM2-213ENST00000491421 POLRMTO00411 1230 aaKnown RBP10.99□□□□□ -0.65
LSM2-213ENST00000491421 NEFMP07197 916 aa10.99□□□□□ -0.65
LSM2-213ENST00000491421 TM4SF1P30408 202 aa10.99□□□□□ -0.65
LSM2-213ENST00000491421 BCS1LQ9Y276 419 aa10.99□□□□□ -0.65
LSM2-213ENST00000491421 UBR2Q8IWV8 1755 aa10.98□□□□□ -0.65
LSM2-213ENST00000491421 A0A087WZG4 1122 aa10.98□□□□□ -0.65
LSM2-213ENST00000491421 KCNQ3O43525 872 aa10.98□□□□□ -0.65
LSM2-213ENST00000491421 HTATSF1O43719 755 aaKnown RBP10.98□□□□□ -0.65
LSM2-213ENST00000491421 GIGYF1O75420 1035 aaPredicted RBP10.98□□□□□ -0.65
LSM2-213ENST00000491421 EIF5P55010 431 aaKnown RBP10.98□□□□□ -0.65
LSM2-213ENST00000491421 DCTN1Q14203 1278 aa10.98□□□□□ -0.65
LSM2-213ENST00000491421 NFIXQ14938 502 aa10.98□□□□□ -0.65
LSM2-213ENST00000491421 PIAS4Q8N2W9 510 aaPredicted RBP10.98□□□□□ -0.65
LSM2-213ENST00000491421 ZNF330Q9Y3S2 320 aaPredicted RBP10.98□□□□□ -0.65
LSM2-213ENST00000491421 ATP10DQ9P241 1426 aa10.98□□□□□ -0.65
LSM2-213ENST00000491421 NPM2Q86SE8 214 aaKnown RBP10.97□□□□□ -0.65
LSM2-213ENST00000491421 BCL2L12Q9HB09 334 aa10.97□□□□□ -0.65
LSM2-213ENST00000491421 KIF13BQ9NQT8 1826 aa10.96□□□□□ -0.65
LSM2-213ENST00000491421 ADCY9O60503 1353 aa10.96□□□□□ -0.65
LSM2-213ENST00000491421 A1BGP04217 495 aa10.96□□□□□ -0.65
LSM2-213ENST00000491421 KCNA3P22001 575 aa10.96□□□□□ -0.65
LSM2-213ENST00000491421 IL6STP40189 918 aaPredicted RBP10.96□□□□□ -0.65
LSM2-213ENST00000491421 C1QTNF8P60827 252 aa10.96□□□□□ -0.65
LSM2-213ENST00000491421 RALBP1Q15311 655 aa10.96□□□□□ -0.65
LSM2-213ENST00000491421 PIM2Q9P1W9 311 aa10.96□□□□□ -0.65
LSM2-213ENST00000491421 VIRMAQ69YN4 1812 aaKnown RBP10.95□□□□□ -0.66
LSM2-213ENST00000491421 SIPA1L3O60292 1781 aaPredicted RBP10.95□□□□□ -0.66
LSM2-213ENST00000491421 KIAA1551Q9HCM1 1747 aa10.95□□□□□ -0.66
LSM2-213ENST00000491421 MAPK8IP3Q9UPT6 1336 aa10.95□□□□□ -0.66
LSM2-213ENST00000491421 SERPINB2P05120 415 aa10.95□□□□□ -0.66
LSM2-213ENST00000491421 SNRPA1P09661 255 aaKnown RBP10.95□□□□□ -0.66
LSM2-213ENST00000491421 KCNA4P22459 653 aa10.95□□□□□ -0.66
LSM2-213ENST00000491421 CHRNA5P30532 468 aa10.95□□□□□ -0.66
LSM2-213ENST00000491421 DDX10Q13206 875 aaKnown RBP10.95□□□□□ -0.66
LSM2-213ENST00000491421 DALRD3Q5D0E6 543 aaKnown RBP10.95□□□□□ -0.66
LSM2-213ENST00000491421 BICDL1Q6ZP65 573 aa10.95□□□□□ -0.66
LSM2-213ENST00000491421 ARHGAP27Q6ZUM4 889 aa10.95□□□□□ -0.66
LSM2-213ENST00000491421 ZNF526Q8TF50 670 aaPredicted RBP10.95□□□□□ -0.66
LSM2-213ENST00000491421 PLEKHF1Q96S99 279 aa10.95□□□□□ -0.66
LSM2-213ENST00000491421 PNNQ9H307 717 aaKnown RBP10.95□□□□□ -0.66
LSM2-213ENST00000491421 GPBP1L1Q9HC44 474 aaPredicted RBP10.95□□□□□ -0.66
LSM2-213ENST00000491421 TBC1D2BQ9UPU7 963 aa10.95□□□□□ -0.66
LSM2-213ENST00000491421 TAF7Q15545 349 aaPredicted RBP10.94□□□□□ -0.66
LSM2-213ENST00000491421 NFE2L2Q16236 605 aa10.94□□□□□ -0.66
LSM2-213ENST00000491421 USP16Q9Y5T5 823 aa10.94□□□□□ -0.66
LSM2-213ENST00000491421 N4BP2Q86UW6 1770 aaPredicted RBP10.94□□□□□ -0.66
LSM2-213ENST00000491421 PRAMEF22A3QJZ6 481 aa10.93□□□□□ -0.66
LSM2-213ENST00000491421 PIP4K2AP48426 406 aaPredicted RBP10.93□□□□□ -0.66
LSM2-213ENST00000491421 TBC1D9BQ66K14 1250 aa10.93□□□□□ -0.66
LSM2-213ENST00000491421 DZIP3Q86Y13 1208 aaKnown RBP10.93□□□□□ -0.66
LSM2-213ENST00000491421 PNISRQ8TF01 805 aaKnown RBP10.93□□□□□ -0.66
LSM2-213ENST00000491421 MIS18AQ9NYP9 233 aa10.93□□□□□ -0.66
LSM2-213ENST00000491421 CARMIL3Q8ND23 1372 aa10.92□□□□□ -0.66
LSM2-213ENST00000491421 CAMTA2O94983 1202 aa10.92□□□□□ -0.66
LSM2-213ENST00000491421 MYBBP1AQ9BQG0 1328 aaKnown RBP10.91□□□□□ -0.66
LSM2-213ENST00000491421 SENP3-EIF4A1A0A087X0R7 540 aa10.91□□□□□ -0.66
LSM2-213ENST00000491421 C2CD5Q86YS7 1000 aa10.91□□□□□ -0.66
LSM2-213ENST00000491421 SETDB2Q96T68 719 aa10.91□□□□□ -0.66
LSM2-213ENST00000491421 THUMPD2Q9BTF0 503 aaKnown RBP10.91□□□□□ -0.66
LSM2-213ENST00000491421 SCN7AQ01118 1682 aa10.91□□□□□ -0.66
LSM2-213ENST00000491421 H0YIN7 160 aa10.9□□□□□ -0.66
LSM2-213ENST00000491421 NPHP1O15259 732 aa10.9□□□□□ -0.66
LSM2-213ENST00000491421 PRR5LQ6MZQ0 368 aa10.9□□□□□ -0.66
LSM2-213ENST00000491421 NRXN2Q9P2S2 1712 aa10.89□□□□□ -0.67
LSM2-213ENST00000491421 NBPF26B4DH59 902 aa10.89□□□□□ -0.67
LSM2-213ENST00000491421 C9orf131Q5VYM1 1079 aa10.89□□□□□ -0.67
LSM2-213ENST00000491421 NBPF10Q6P3W6 841 aaKnown RBP10.89□□□□□ -0.67
LSM2-213ENST00000491421 CCDC24Q8N4L8 307 aa10.89□□□□□ -0.67
LSM2-213ENST00000491421 NBPF15Q8N660 670 aa10.89□□□□□ -0.67
LSM2-213ENST00000491421 TTLL6Q8N841 843 aa10.89□□□□□ -0.67
LSM2-213ENST00000491421 CNBD1Q8NA66 436 aa10.89□□□□□ -0.67
LSM2-213ENST00000491421 BRIP1Q9BX63 1249 aa10.89□□□□□ -0.67
LSM2-213ENST00000491421 ZNF652Q9Y2D9 606 aa10.89□□□□□ -0.67
LSM2-213ENST00000491421 PDE6BP35913 854 aa10.88□□□□□ -0.67
LSM2-213ENST00000491421 RIPK4P57078 832 aa10.88□□□□□ -0.67
LSM2-213ENST00000491421 EIF4A1P60842 406 aaKnown RBP10.88□□□□□ -0.67
LSM2-213ENST00000491421 ST5P78524 1137 aa10.88□□□□□ -0.67
LSM2-213ENST00000491421 WDR43Q15061 677 aaKnown RBP eCLIP10.88□□□□□ -0.67
LSM2-213ENST00000491421 CLEC4GQ6UXB4 293 aa10.88□□□□□ -0.67
LSM2-213ENST00000491421 RNF181Q9P0P0 153 aa10.88□□□□□ -0.67
LSM2-213ENST00000491421 PDZRN3Q9UPQ7 1066 aa10.88□□□□□ -0.67
LSM2-213ENST00000491421 BRCA1P38398 1863 aaKnown RBP10.87□□□□□ -0.67
LSM2-213ENST00000491421 RGL2O15211 777 aa10.87□□□□□ -0.67
LSM2-213ENST00000491421 LMOD3Q0VAK6 560 aa10.87□□□□□ -0.67
LSM2-213ENST00000491421 NBPF5PQ86XG9 351 aaPredicted RBP10.87□□□□□ -0.67
LSM2-213ENST00000491421 ZNF622Q969S3 477 aaKnown RBP eCLIP10.87□□□□□ -0.67
LSM2-213ENST00000491421 TSPYL4Q9UJ04 414 aa10.87□□□□□ -0.67
LSM2-213ENST00000491421 AFDNP55196 1824 aaKnown RBP10.86□□□□□ -0.67
LSM2-213ENST00000491421 KIF3CO14782 793 aa10.86□□□□□ -0.67
LSM2-213ENST00000491421 TMPOP42166 694 aaKnown RBP10.86□□□□□ -0.67
LSM2-213ENST00000491421 RASSF7Q02833 373 aa10.86□□□□□ -0.67
LSM2-213ENST00000491421 CCDC146Q8IYE0 955 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms