RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 ZC3H4Q9UPT8 1303 aaKnown RBP11.49□□□□□ -0.57
APOBEC3F-204ENST00000491387 KCPQ6ZWJ8 1503 aa11.49□□□□□ -0.57
APOBEC3F-204ENST00000491387 FSTL1Q12841 308 aa11.48□□□□□ -0.57
APOBEC3F-204ENST00000491387 USPL1Q5W0Q7 1092 aa11.48□□□□□ -0.57
APOBEC3F-204ENST00000491387 KIF7Q2M1P5 1343 aa11.48□□□□□ -0.57
APOBEC3F-204ENST00000491387 UBR2Q8IWV8 1755 aa11.47□□□□□ -0.57
APOBEC3F-204ENST00000491387 COL15A1P39059 1388 aa11.47□□□□□ -0.57
APOBEC3F-204ENST00000491387 KDM2BQ8NHM5 1336 aa11.47□□□□□ -0.57
APOBEC3F-204ENST00000491387 CHRNA5P30532 468 aa11.47□□□□□ -0.57
APOBEC3F-204ENST00000491387 NFIXQ14938 502 aa11.47□□□□□ -0.57
APOBEC3F-204ENST00000491387 BCL2L12Q9HB09 334 aa11.47□□□□□ -0.57
APOBEC3F-204ENST00000491387 DLG5Q8TDM6 1919 aa11.47□□□□□ -0.57
APOBEC3F-204ENST00000491387 AFDNP55196 1824 aaKnown RBP11.46□□□□□ -0.57
APOBEC3F-204ENST00000491387 NPC1L1Q9UHC9 1359 aa11.46□□□□□ -0.57
APOBEC3F-204ENST00000491387 SLC39A6Q13433 755 aa11.46□□□□□ -0.57
APOBEC3F-204ENST00000491387 MTHFSDQ2M296 383 aaKnown RBP11.46□□□□□ -0.57
APOBEC3F-204ENST00000491387 ZBTB1Q9Y2K1 713 aa11.46□□□□□ -0.57
APOBEC3F-204ENST00000491387 SIPA1L3O60292 1781 aaPredicted RBP11.46□□□□□ -0.58
APOBEC3F-204ENST00000491387 DLEC1Q9Y238 1755 aa11.46□□□□□ -0.58
APOBEC3F-204ENST00000491387 DIAPH1O60610 1272 aaKnown RBP11.45□□□□□ -0.58
APOBEC3F-204ENST00000491387 EIF5P55010 431 aaKnown RBP11.45□□□□□ -0.58
APOBEC3F-204ENST00000491387 RNF181Q9P0P0 153 aa11.45□□□□□ -0.58
APOBEC3F-204ENST00000491387 TNRC6CQ9HCJ0 1690 aaKnown RBP11.45□□□□□ -0.58
APOBEC3F-204ENST00000491387 WDR90Q96KV7 1748 aa11.44□□□□□ -0.58
APOBEC3F-204ENST00000491387 SERPINB2P05120 415 aa11.44□□□□□ -0.58
APOBEC3F-204ENST00000491387 HMOX1P09601 288 aa11.44□□□□□ -0.58
APOBEC3F-204ENST00000491387 JMYQ8N9B5 988 aa11.44□□□□□ -0.58
APOBEC3F-204ENST00000491387 COL3A1P02461 1466 aaPredicted RBP11.44□□□□□ -0.58
APOBEC3F-204ENST00000491387 A0A087WZG4 1122 aa11.43□□□□□ -0.58
APOBEC3F-204ENST00000491387 STARD3NLO95772 234 aa11.43□□□□□ -0.58
APOBEC3F-204ENST00000491387 CNGB1Q14028 1251 aaPredicted RBP11.43□□□□□ -0.58
APOBEC3F-204ENST00000491387 C16orf71Q8IYS4 520 aaPredicted RBP11.43□□□□□ -0.58
APOBEC3F-204ENST00000491387 TEX13AQ9BXU3 409 aaPredicted RBP11.43□□□□□ -0.58
APOBEC3F-204ENST00000491387 PDZRN3Q9UPQ7 1066 aa11.43□□□□□ -0.58
APOBEC3F-204ENST00000491387 LMNB1P20700 586 aa11.42□□□□□ -0.58
APOBEC3F-204ENST00000491387 TTLL6Q8N841 843 aa11.42□□□□□ -0.58
APOBEC3F-204ENST00000491387 IL17REQ8NFR9 667 aa11.42□□□□□ -0.58
APOBEC3F-204ENST00000491387 KLRG1Q96E93 195 aa11.42□□□□□ -0.58
APOBEC3F-204ENST00000491387 RRAGCQ9HB90 399 aa11.42□□□□□ -0.58
APOBEC3F-204ENST00000491387 CEMIPQ8WUJ3 1361 aa11.41□□□□□ -0.58
APOBEC3F-204ENST00000491387 GLTPD2A6NH11 291 aa11.41□□□□□ -0.58
APOBEC3F-204ENST00000491387 PRELPP51888 382 aa11.41□□□□□ -0.58
APOBEC3F-204ENST00000491387 ZNF790Q6PG37 636 aa11.41□□□□□ -0.58
APOBEC3F-204ENST00000491387 SMC1BQ8NDV3 1235 aa11.41□□□□□ -0.58
APOBEC3F-204ENST00000491387 GAS2L2Q8NHY3 880 aa11.41□□□□□ -0.58
APOBEC3F-204ENST00000491387 ZNF496Q96IT1 587 aaPredicted RBP11.41□□□□□ -0.58
APOBEC3F-204ENST00000491387 HEG1Q9ULI3 1381 aa11.41□□□□□ -0.58
APOBEC3F-204ENST00000491387 GNAT3A8MTJ3 354 aa11.4□□□□□ -0.58
APOBEC3F-204ENST00000491387 H0YIN7 160 aa11.4□□□□□ -0.58
APOBEC3F-204ENST00000491387 CANXP27824 592 aaKnown RBP11.4□□□□□ -0.58
APOBEC3F-204ENST00000491387 IL6STP40189 918 aaPredicted RBP11.4□□□□□ -0.58
APOBEC3F-204ENST00000491387 RASSF7Q02833 373 aa11.4□□□□□ -0.58
APOBEC3F-204ENST00000491387 C2CD5Q86YS7 1000 aa11.4□□□□□ -0.58
APOBEC3F-204ENST00000491387 TTC5Q8N0Z6 440 aa11.4□□□□□ -0.58
APOBEC3F-204ENST00000491387 BRIP1Q9BX63 1249 aa11.4□□□□□ -0.58
APOBEC3F-204ENST00000491387 CARMIL3Q8ND23 1372 aa11.4□□□□□ -0.59
APOBEC3F-204ENST00000491387 NFKBIEO00221 500 aa11.39□□□□□ -0.59
APOBEC3F-204ENST00000491387 VEGFAP15692 232 aaPredicted RBP11.39□□□□□ -0.59
APOBEC3F-204ENST00000491387 TEFQ10587 303 aa11.39□□□□□ -0.59
APOBEC3F-204ENST00000491387 ANKRD31Q8N7Z5 1873 aa11.39□□□□□ -0.59
APOBEC3F-204ENST00000491387 SCN7AQ01118 1682 aa11.39□□□□□ -0.59
APOBEC3F-204ENST00000491387 LTBP3Q9NS15 1303 aa11.38□□□□□ -0.59
APOBEC3F-204ENST00000491387 RGL2O15211 777 aa11.38□□□□□ -0.59
APOBEC3F-204ENST00000491387 PDE6BP35913 854 aa11.38□□□□□ -0.59
APOBEC3F-204ENST00000491387 CC2D1BQ5T0F9 858 aaKnown RBP11.38□□□□□ -0.59
APOBEC3F-204ENST00000491387 TBC1D9BQ66K14 1250 aa11.38□□□□□ -0.59
APOBEC3F-204ENST00000491387 FER1L6Q2WGJ9 1857 aa11.38□□□□□ -0.59
APOBEC3F-204ENST00000491387 CCDC88AQ3V6T2 1871 aa11.38□□□□□ -0.59
APOBEC3F-204ENST00000491387 DICER1Q9UPY3 1922 aaKnown RBP11.37□□□□□ -0.59
APOBEC3F-204ENST00000491387 POTECB2RU33 542 aa11.37□□□□□ -0.59
APOBEC3F-204ENST00000491387 PRR5LQ6MZQ0 368 aa11.37□□□□□ -0.59
APOBEC3F-204ENST00000491387 FMNL2Q96PY5 1086 aa11.37□□□□□ -0.59
APOBEC3F-204ENST00000491387 CACNA1SQ13698 1873 aa11.37□□□□□ -0.59
APOBEC3F-204ENST00000491387 CAMTA2O94983 1202 aa11.36□□□□□ -0.59
APOBEC3F-204ENST00000491387 HTRA3P83110 453 aa11.36□□□□□ -0.59
APOBEC3F-204ENST00000491387 CLEC4GQ6UXB4 293 aa11.36□□□□□ -0.59
APOBEC3F-204ENST00000491387 TBC1D2BQ9UPU7 963 aa11.36□□□□□ -0.59
APOBEC3F-204ENST00000491387 TIAM2Q8IVF5 1701 aa11.35□□□□□ -0.59
APOBEC3F-204ENST00000491387 U2SURPO15042 1029 aaKnown RBP11.35□□□□□ -0.59
APOBEC3F-204ENST00000491387 STYK1Q6J9G0 422 aa11.35□□□□□ -0.59
APOBEC3F-204ENST00000491387 DPY19L2Q6NUT2 758 aa11.35□□□□□ -0.59
APOBEC3F-204ENST00000491387 BICDL1Q6ZP65 573 aa11.35□□□□□ -0.59
APOBEC3F-204ENST00000491387 CNKSR1Q969H4 720 aa11.35□□□□□ -0.59
APOBEC3F-204ENST00000491387 PHACTR3Q96KR7 559 aa11.35□□□□□ -0.59
APOBEC3F-204ENST00000491387 SETDB2Q96T68 719 aa11.35□□□□□ -0.59
APOBEC3F-204ENST00000491387 RSPH6AQ9H0K4 717 aa11.35□□□□□ -0.59
APOBEC3F-204ENST00000491387 COL11A2P13942 1736 aaPredicted RBP11.35□□□□□ -0.59
APOBEC3F-204ENST00000491387 KLRG2A4D1S0 409 aaPredicted RBP11.34□□□□□ -0.59
APOBEC3F-204ENST00000491387 A1BGP04217 495 aa11.34□□□□□ -0.59
APOBEC3F-204ENST00000491387 SRGNP10124 158 aa11.34□□□□□ -0.59
APOBEC3F-204ENST00000491387 SOGA3Q5TF21 947 aa11.34□□□□□ -0.59
APOBEC3F-204ENST00000491387 BCORQ6W2J9 1755 aa11.33□□□□□ -0.59
APOBEC3F-204ENST00000491387 ARFGEF2Q9Y6D5 1785 aa11.33□□□□□ -0.59
APOBEC3F-204ENST00000491387 SLX4Q8IY92 1834 aa11.33□□□□□ -0.6
APOBEC3F-204ENST00000491387 BTBD11A6QL63 1104 aa11.33□□□□□ -0.6
APOBEC3F-204ENST00000491387 KCNQ3O43525 872 aa11.33□□□□□ -0.6
APOBEC3F-204ENST00000491387 C21orf2O43822 256 aa11.33□□□□□ -0.6
APOBEC3F-204ENST00000491387 PRKAR2BP31323 418 aa11.33□□□□□ -0.6
APOBEC3F-204ENST00000491387 CNBD1Q8NA66 436 aa11.33□□□□□ -0.6
APOBEC3F-204ENST00000491387 C7orf43Q8WVR3 580 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms