RNA–Protein interactions for RNA: ENST00000491362.1

USP30-207, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 2

Gene USP30, Length 745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-207ENST00000491362 PARP3Q9Y6F1 533 aa11.47□□□□□ -0.57
USP30-207ENST00000491362 GOLGB1Q14789 3259 aaKnown RBP11.47□□□□□ -0.57
USP30-207ENST00000491362 KCPQ6ZWJ8 1503 aa11.46□□□□□ -0.57
USP30-207ENST00000491362 ATP10DQ9P241 1426 aa11.46□□□□□ -0.57
USP30-207ENST00000491362 SOS1Q07889 1333 aaPredicted RBP11.46□□□□□ -0.57
USP30-207ENST00000491362 TM4SF1P30408 202 aa11.46□□□□□ -0.57
USP30-207ENST00000491362 GAS2L2Q8NHY3 880 aa11.46□□□□□ -0.57
USP30-207ENST00000491362 DSG3P32926 999 aa11.45□□□□□ -0.58
USP30-207ENST00000491362 DNAJC10Q8IXB1 793 aa11.45□□□□□ -0.58
USP30-207ENST00000491362 CEMIPQ8WUJ3 1361 aa11.44□□□□□ -0.58
USP30-207ENST00000491362 GNAT3A8MTJ3 354 aa11.44□□□□□ -0.58
USP30-207ENST00000491362 KCNA3P22001 575 aa11.44□□□□□ -0.58
USP30-207ENST00000491362 CFAP53Q96M91 514 aa11.44□□□□□ -0.58
USP30-207ENST00000491362 TEX13AQ9BXU3 409 aaPredicted RBP11.44□□□□□ -0.58
USP30-207ENST00000491362 NARFQ9UHQ1 456 aa11.44□□□□□ -0.58
USP30-207ENST00000491362 UBR2Q8IWV8 1755 aa11.44□□□□□ -0.58
USP30-207ENST00000491362 A0A0G2JLW4 131 aa11.43□□□□□ -0.58
USP30-207ENST00000491362 POLRMTO00411 1230 aaKnown RBP11.43□□□□□ -0.58
USP30-207ENST00000491362 DPEP1P16444 411 aa11.43□□□□□ -0.58
USP30-207ENST00000491362 DDR1Q08345 913 aa11.43□□□□□ -0.58
USP30-207ENST00000491362 SLC39A6Q13433 755 aa11.43□□□□□ -0.58
USP30-207ENST00000491362 IL17REQ8NFR9 667 aa11.43□□□□□ -0.58
USP30-207ENST00000491362 GPBP1L1Q9HC44 474 aaPredicted RBP11.43□□□□□ -0.58
USP30-207ENST00000491362 ZPR1O75312 459 aa11.42□□□□□ -0.58
USP30-207ENST00000491362 STARD3NLO95772 234 aa11.42□□□□□ -0.58
USP30-207ENST00000491362 ZNF790Q6PG37 636 aa11.42□□□□□ -0.58
USP30-207ENST00000491362 RSPH6AQ9H0K4 717 aa11.42□□□□□ -0.58
USP30-207ENST00000491362 PIM2Q9P1W9 311 aa11.42□□□□□ -0.58
USP30-207ENST00000491362 SRP68Q9UHB9 627 aaKnown RBP11.42□□□□□ -0.58
USP30-207ENST00000491362 NUDCQ9Y266 331 aa11.42□□□□□ -0.58
USP30-207ENST00000491362 BRCA1P38398 1863 aaKnown RBP11.42□□□□□ -0.58
USP30-207ENST00000491362 COL15A1P39059 1388 aa11.41□□□□□ -0.58
USP30-207ENST00000491362 U2SURPO15042 1029 aaKnown RBP11.41□□□□□ -0.58
USP30-207ENST00000491362 FCHSD2O94868 740 aa11.41□□□□□ -0.58
USP30-207ENST00000491362 EIF5P55010 431 aaKnown RBP11.41□□□□□ -0.58
USP30-207ENST00000491362 TEFQ10587 303 aa11.41□□□□□ -0.58
USP30-207ENST00000491362 TTC5Q8N0Z6 440 aa11.41□□□□□ -0.58
USP30-207ENST00000491362 BCS1LQ9Y276 419 aa11.41□□□□□ -0.58
USP30-207ENST00000491362 ZBTB1Q9Y2K1 713 aa11.41□□□□□ -0.58
USP30-207ENST00000491362 HEG1Q9ULI3 1381 aa11.41□□□□□ -0.58
USP30-207ENST00000491362 VIRMAQ69YN4 1812 aaKnown RBP11.4□□□□□ -0.58
USP30-207ENST00000491362 A0A087WZG4 1122 aa11.4□□□□□ -0.58
USP30-207ENST00000491362 SENP3-EIF4A1A0A087X0R7 540 aa11.4□□□□□ -0.58
USP30-207ENST00000491362 HTATSF1O43719 755 aaKnown RBP11.4□□□□□ -0.58
USP30-207ENST00000491362 PPP2R1AP30153 589 aa11.4□□□□□ -0.58
USP30-207ENST00000491362 USPL1Q5W0Q7 1092 aa11.4□□□□□ -0.58
USP30-207ENST00000491362 ZNF496Q96IT1 587 aaPredicted RBP11.4□□□□□ -0.58
USP30-207ENST00000491362 BCL2L12Q9HB09 334 aa11.4□□□□□ -0.58
USP30-207ENST00000491362 NRXN2Q9P2S2 1712 aa11.4□□□□□ -0.58
USP30-207ENST00000491362 SIPA1L3O60292 1781 aaPredicted RBP11.39□□□□□ -0.59
USP30-207ENST00000491362 N4BP2Q86UW6 1770 aaPredicted RBP11.39□□□□□ -0.59
USP30-207ENST00000491362 PRKAR2BP31323 418 aa11.39□□□□□ -0.59
USP30-207ENST00000491362 IL6STP40189 918 aaPredicted RBP11.39□□□□□ -0.59
USP30-207ENST00000491362 NFIXQ14938 502 aa11.39□□□□□ -0.59
USP30-207ENST00000491362 DALRD3Q5D0E6 543 aaKnown RBP11.39□□□□□ -0.59
USP30-207ENST00000491362 PHACTR3Q96KR7 559 aa11.39□□□□□ -0.59
USP30-207ENST00000491362 FMNL2Q96PY5 1086 aa11.39□□□□□ -0.59
USP30-207ENST00000491362 ARFGEF1Q9Y6D6 1849 aa11.39□□□□□ -0.59
USP30-207ENST00000491362 SPDYE2BA6NHP3 402 aa11.38□□□□□ -0.59
USP30-207ENST00000491362 RGL2O15211 777 aa11.38□□□□□ -0.59
USP30-207ENST00000491362 SPDYE6P0CI01 402 aa11.38□□□□□ -0.59
USP30-207ENST00000491362 PLCB2Q00722 1185 aa11.38□□□□□ -0.59
USP30-207ENST00000491362 SPDYE2Q495Y8 402 aa11.38□□□□□ -0.59
USP30-207ENST00000491362 PDZRN3Q9UPQ7 1066 aa11.38□□□□□ -0.59
USP30-207ENST00000491362 KIF3CO14782 793 aa11.37□□□□□ -0.59
USP30-207ENST00000491362 SERPINB2P05120 415 aa11.37□□□□□ -0.59
USP30-207ENST00000491362 ARHGAP27Q6ZUM4 889 aa11.37□□□□□ -0.59
USP30-207ENST00000491362 ZC3H4Q9UPT8 1303 aaKnown RBP11.36□□□□□ -0.59
USP30-207ENST00000491362 BTBD11A6QL63 1104 aa11.36□□□□□ -0.59
USP30-207ENST00000491362 CANXP27824 592 aaKnown RBP11.36□□□□□ -0.59
USP30-207ENST00000491362 WWC3Q9ULE0 1092 aa11.36□□□□□ -0.59
USP30-207ENST00000491362 U2AF1L5P0DN76 240 aaPredicted RBP11.35□□□□□ -0.59
USP30-207ENST00000491362 HSPA6P17066 643 aa11.35□□□□□ -0.59
USP30-207ENST00000491362 CHRNA5P30532 468 aa11.35□□□□□ -0.59
USP30-207ENST00000491362 U2AF1Q01081 240 aaKnown RBP eCLIP11.35□□□□□ -0.59
USP30-207ENST00000491362 SSUH2Q9Y2M2 353 aa11.35□□□□□ -0.59
USP30-207ENST00000491362 TOMM70O94826 608 aa11.34□□□□□ -0.59
USP30-207ENST00000491362 SNRPA1P09661 255 aaKnown RBP11.34□□□□□ -0.59
USP30-207ENST00000491362 CLEC4GQ6UXB4 293 aa11.34□□□□□ -0.59
USP30-207ENST00000491362 RTF1Q92541 710 aaKnown RBP11.34□□□□□ -0.59
USP30-207ENST00000491362 SPOCK2Q92563 424 aa11.34□□□□□ -0.59
USP30-207ENST00000491362 SCN7AQ01118 1682 aa11.33□□□□□ -0.6
USP30-207ENST00000491362 AFDNP55196 1824 aaKnown RBP11.33□□□□□ -0.6
USP30-207ENST00000491362 CARMIL3Q8ND23 1372 aa11.33□□□□□ -0.6
USP30-207ENST00000491362 C9orf131Q5VYM1 1079 aa11.33□□□□□ -0.6
USP30-207ENST00000491362 TTLL6Q8N841 843 aa11.33□□□□□ -0.6
USP30-207ENST00000491362 ZNF526Q8TF50 670 aaPredicted RBP11.33□□□□□ -0.6
USP30-207ENST00000491362 BRIP1Q9BX63 1249 aa11.33□□□□□ -0.6
USP30-207ENST00000491362 DLEC1Q9Y238 1755 aa11.33□□□□□ -0.6
USP30-207ENST00000491362 H0YIN7 160 aa11.32□□□□□ -0.6
USP30-207ENST00000491362 KCNQ3O43525 872 aa11.32□□□□□ -0.6
USP30-207ENST00000491362 CAMTA2O94983 1202 aa11.32□□□□□ -0.6
USP30-207ENST00000491362 A1BGP04217 495 aa11.32□□□□□ -0.6
USP30-207ENST00000491362 PDE6BP35913 854 aa11.32□□□□□ -0.6
USP30-207ENST00000491362 TAF7Q15545 349 aaPredicted RBP11.32□□□□□ -0.6
USP30-207ENST00000491362 TBC1D9BQ66K14 1250 aa11.32□□□□□ -0.6
USP30-207ENST00000491362 USP16Q9Y5T5 823 aa11.32□□□□□ -0.6
USP30-207ENST00000491362 KDM2BQ8NHM5 1336 aa11.32□□□□□ -0.6
USP30-207ENST00000491362 CNGB1Q14028 1251 aaPredicted RBP11.31□□□□□ -0.6
USP30-207ENST00000491362 NPM2Q86SE8 214 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms