RNA–Protein interactions for RNA: ENST00000490953.5

SBDS-204, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 1 (best)

Gene SBDS, Length 841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-204ENST00000490953 BTBD11A6QL63 1104 aa24.3■■□□□ 1.48
SBDS-204ENST00000490953 STARD3NLO95772 234 aa24.3■■□□□ 1.48
SBDS-204ENST00000490953 NEFMP07197 916 aa24.3■■□□□ 1.48
SBDS-204ENST00000490953 USPL1Q5W0Q7 1092 aa24.3■■□□□ 1.48
SBDS-204ENST00000490953 MCM10Q7L590 875 aa24.3■■□□□ 1.48
SBDS-204ENST00000490953 FMNL2Q96PY5 1086 aa24.3■■□□□ 1.48
SBDS-204ENST00000490953 CANXP27824 592 aaKnown RBP24.29■■□□□ 1.48
SBDS-204ENST00000490953 DDX10Q13206 875 aaKnown RBP24.29■■□□□ 1.48
SBDS-204ENST00000490953 TGFB2P61812 414 aa24.28■■□□□ 1.48
SBDS-204ENST00000490953 TEX13AQ9BXU3 409 aaPredicted RBP24.28■■□□□ 1.48
SBDS-204ENST00000490953 DDR1Q08345 913 aa24.27■■□□□ 1.48
SBDS-204ENST00000490953 NARFQ9UHQ1 456 aa24.27■■□□□ 1.48
SBDS-204ENST00000490953 GOLGB1Q14789 3259 aaKnown RBP24.27■■□□□ 1.48
SBDS-204ENST00000490953 KCNQ3O43525 872 aa24.26■■□□□ 1.47
SBDS-204ENST00000490953 DCTN1Q14203 1278 aa24.26■■□□□ 1.47
SBDS-204ENST00000490953 RALBP1Q15311 655 aa24.26■■□□□ 1.47
SBDS-204ENST00000490953 BRCA1P38398 1863 aaKnown RBP24.26■■□□□ 1.47
SBDS-204ENST00000490953 A0A0G2JLW4 131 aa24.25■■□□□ 1.47
SBDS-204ENST00000490953 HTATSF1O43719 755 aaKnown RBP24.25■■□□□ 1.47
SBDS-204ENST00000490953 SCN7AQ01118 1682 aa24.24■■□□□ 1.47
SBDS-204ENST00000490953 AFDNP55196 1824 aaKnown RBP24.24■■□□□ 1.47
SBDS-204ENST00000490953 POLRMTO00411 1230 aaKnown RBP24.23■■□□□ 1.47
SBDS-204ENST00000490953 TM4SF1P30408 202 aa24.23■■□□□ 1.47
SBDS-204ENST00000490953 EIF5P55010 431 aaKnown RBP24.23■■□□□ 1.47
SBDS-204ENST00000490953 ZNF330Q9Y3S2 320 aaPredicted RBP24.23■■□□□ 1.47
SBDS-204ENST00000490953 A0A087WZG4 1122 aa24.22■■□□□ 1.47
SBDS-204ENST00000490953 DPEP1P16444 411 aa24.22■■□□□ 1.47
SBDS-204ENST00000490953 PLEKHF1Q96S99 279 aa24.22■■□□□ 1.47
SBDS-204ENST00000490953 MAPK8IP3Q9UPT6 1336 aa24.21■■□□□ 1.47
SBDS-204ENST00000490953 PNNQ9H307 717 aaKnown RBP24.21■■□□□ 1.47
SBDS-204ENST00000490953 BCS1LQ9Y276 419 aa24.21■■□□□ 1.47
SBDS-204ENST00000490953 NRXN2Q9P2S2 1712 aa24.21■■□□□ 1.47
SBDS-204ENST00000490953 NFIXQ14938 502 aa24.2■■□□□ 1.46
SBDS-204ENST00000490953 BCL2L12Q9HB09 334 aa24.2■■□□□ 1.46
SBDS-204ENST00000490953 A1BGP04217 495 aa24.19■■□□□ 1.46
SBDS-204ENST00000490953 IL6STP40189 918 aaPredicted RBP24.19■■□□□ 1.46
SBDS-204ENST00000490953 NFE2L2Q16236 605 aa24.19■■□□□ 1.46
SBDS-204ENST00000490953 KDM3BQ7LBC6 1761 aa24.19■■□□□ 1.46
SBDS-204ENST00000490953 MYBBP1AQ9BQG0 1328 aaKnown RBP24.18■■□□□ 1.46
SBDS-204ENST00000490953 TAF7Q15545 349 aaPredicted RBP24.18■■□□□ 1.46
SBDS-204ENST00000490953 NPM2Q86SE8 214 aaKnown RBP24.18■■□□□ 1.46
SBDS-204ENST00000490953 ARFGEF1Q9Y6D6 1849 aa24.18■■□□□ 1.46
SBDS-204ENST00000490953 LAMB4A4D0S4 1761 aa24.17■■□□□ 1.46
SBDS-204ENST00000490953 BCORQ6W2J9 1755 aa24.17■■□□□ 1.46
SBDS-204ENST00000490953 SNRPA1P09661 255 aaKnown RBP24.17■■□□□ 1.46
SBDS-204ENST00000490953 USP16Q9Y5T5 823 aa24.17■■□□□ 1.46
SBDS-204ENST00000490953 ATP10DQ9P241 1426 aa24.17■■□□□ 1.46
SBDS-204ENST00000490953 PRAMEF22A3QJZ6 481 aa24.16■■□□□ 1.46
SBDS-204ENST00000490953 TBC1D2BQ9UPU7 963 aa24.16■■□□□ 1.46
SBDS-204ENST00000490953 SERPINB2P05120 415 aa24.15■■□□□ 1.46
SBDS-204ENST00000490953 KCNA3P22001 575 aa24.15■■□□□ 1.46
SBDS-204ENST00000490953 BICDL1Q6ZP65 573 aa24.15■■□□□ 1.46
SBDS-204ENST00000490953 ADCY9O60503 1353 aa24.15■■□□□ 1.46
SBDS-204ENST00000490953 MIS18AQ9NYP9 233 aa24.14■■□□□ 1.45
SBDS-204ENST00000490953 PIM2Q9P1W9 311 aa24.14■■□□□ 1.45
SBDS-204ENST00000490953 CHRNA5P30532 468 aa24.13■■□□□ 1.45
SBDS-204ENST00000490953 PIP4K2AP48426 406 aaPredicted RBP24.13■■□□□ 1.45
SBDS-204ENST00000490953 PNISRQ8TF01 805 aaKnown RBP24.13■■□□□ 1.45
SBDS-204ENST00000490953 DLEC1Q9Y238 1755 aa24.13■■□□□ 1.45
SBDS-204ENST00000490953 TBC1D9BQ66K14 1250 aa24.12■■□□□ 1.45
SBDS-204ENST00000490953 THUMPD2Q9BTF0 503 aaKnown RBP24.12■■□□□ 1.45
SBDS-204ENST00000490953 GIGYF1O75420 1035 aaPredicted RBP24.11■■□□□ 1.45
SBDS-204ENST00000490953 ARHGAP27Q6ZUM4 889 aa24.11■■□□□ 1.45
SBDS-204ENST00000490953 DZIP3Q86Y13 1208 aaKnown RBP24.11■■□□□ 1.45
SBDS-204ENST00000490953 CAMTA2O94983 1202 aa24.1■■□□□ 1.45
SBDS-204ENST00000490953 DALRD3Q5D0E6 543 aaKnown RBP24.1■■□□□ 1.45
SBDS-204ENST00000490953 CARMIL3Q8ND23 1372 aa24.09■■□□□ 1.45
SBDS-204ENST00000490953 ANKRD31Q8N7Z5 1873 aa24.08■■□□□ 1.45
SBDS-204ENST00000490953 RIPK4P57078 832 aa24.07■■□□□ 1.44
SBDS-204ENST00000490953 ZNF526Q8TF50 670 aaPredicted RBP24.07■■□□□ 1.44
SBDS-204ENST00000490953 C1QTNF8P60827 252 aa24.06■■□□□ 1.44
SBDS-204ENST00000490953 WDR43Q15061 677 aaKnown RBP eCLIP24.06■■□□□ 1.44
SBDS-204ENST00000490953 GPBP1L1Q9HC44 474 aaPredicted RBP24.06■■□□□ 1.44
SBDS-204ENST00000490953 NBPF26B4DH59 902 aa24.05■■□□□ 1.44
SBDS-204ENST00000490953 NBPF10Q6P3W6 841 aaKnown RBP24.05■■□□□ 1.44
SBDS-204ENST00000490953 NBPF15Q8N660 670 aa24.05■■□□□ 1.44
SBDS-204ENST00000490953 SETDB2Q96T68 719 aa24.05■■□□□ 1.44
SBDS-204ENST00000490953 TMPOP42166 694 aaKnown RBP24.04■■□□□ 1.44
SBDS-204ENST00000490953 EIF4A1P60842 406 aaKnown RBP24.04■■□□□ 1.44
SBDS-204ENST00000490953 LMOD3Q0VAK6 560 aa24.04■■□□□ 1.44
SBDS-204ENST00000490953 C2CD5Q86YS7 1000 aa24.04■■□□□ 1.44
SBDS-204ENST00000490953 CCDC146Q8IYE0 955 aa24.04■■□□□ 1.44
SBDS-204ENST00000490953 PRKRIP1Q9H875 184 aaPredicted RBP24.04■■□□□ 1.44
SBDS-204ENST00000490953 ZNF652Q9Y2D9 606 aa24.04■■□□□ 1.44
SBDS-204ENST00000490953 COL11A2P13942 1736 aaPredicted RBP24.04■■□□□ 1.44
SBDS-204ENST00000490953 NPHP1O15259 732 aa24.03■■□□□ 1.44
SBDS-204ENST00000490953 PRR5LQ6MZQ0 368 aa24.03■■□□□ 1.44
SBDS-204ENST00000490953 H0YIN7 160 aa24.02■■□□□ 1.44
SBDS-204ENST00000490953 ZEB1P37275 1124 aaPredicted RBP24.02■■□□□ 1.44
SBDS-204ENST00000490953 CCDC24Q8N4L8 307 aa24.02■■□□□ 1.44
SBDS-204ENST00000490953 CNBD1Q8NA66 436 aa24.02■■□□□ 1.44
SBDS-204ENST00000490953 TSPYL4Q9UJ04 414 aa24.02■■□□□ 1.44
SBDS-204ENST00000490953 CLEC4GQ6UXB4 293 aa24.01■■□□□ 1.43
SBDS-204ENST00000490953 RRP7AQ9Y3A4 280 aaKnown RBP24.01■■□□□ 1.43
SBDS-204ENST00000490953 TTLL6Q8N841 843 aa24■■□□□ 1.43
SBDS-204ENST00000490953 RUNDC1Q96C34 613 aa24■■□□□ 1.43
SBDS-204ENST00000490953 BRIP1Q9BX63 1249 aa24■■□□□ 1.43
SBDS-204ENST00000490953 PDE6BP35913 854 aa23.99■■□□□ 1.43
SBDS-204ENST00000490953 ST5P78524 1137 aa23.99■■□□□ 1.43
SBDS-204ENST00000490953 NEUROD2Q15784 382 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms