RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 CHRM1P11229 460 aaPredicted RBP12.64□□□□□ -0.39
HDAC9-225ENST00000490851 HSP90AB1P08238 724 aaKnown RBP12.64□□□□□ -0.39
HDAC9-225ENST00000490851 PROSER3Q2NL68 480 aa12.64□□□□□ -0.39
HDAC9-225ENST00000490851 TTC5Q8N0Z6 440 aa12.64□□□□□ -0.39
HDAC9-225ENST00000490851 ADAMTS7Q9UKP4 1686 aa12.64□□□□□ -0.39
HDAC9-225ENST00000490851 HOXB7P09629 217 aa12.63□□□□□ -0.39
HDAC9-225ENST00000490851 SIRT2Q8IXJ6 389 aa12.63□□□□□ -0.39
HDAC9-225ENST00000490851 CCT4P50991 539 aaKnown RBP12.63□□□□□ -0.39
HDAC9-225ENST00000490851 PLCB2Q00722 1185 aa12.63□□□□□ -0.39
HDAC9-225ENST00000490851 ZNF496Q96IT1 587 aaPredicted RBP12.63□□□□□ -0.39
HDAC9-225ENST00000490851 TEX2Q8IWB9 1127 aa12.62□□□□□ -0.39
HDAC9-225ENST00000490851 BACH2Q9BYV9 841 aa12.62□□□□□ -0.39
HDAC9-225ENST00000490851 COL16A1Q07092 1604 aaPredicted RBP12.62□□□□□ -0.39
HDAC9-225ENST00000490851 PIP4K2AP48426 406 aaPredicted RBP12.62□□□□□ -0.39
HDAC9-225ENST00000490851 COL14A1Q05707 1796 aaKnown RBP12.62□□□□□ -0.39
HDAC9-225ENST00000490851 AIMP1Q12904 312 aaKnown RBP12.61□□□□□ -0.39
HDAC9-225ENST00000490851 LNPKQ9C0E8 428 aa12.61□□□□□ -0.39
HDAC9-225ENST00000490851 DBF4Q9UBU7 674 aaPredicted RBP12.61□□□□□ -0.39
HDAC9-225ENST00000490851 COL22A1Q8NFW1 1626 aaPredicted RBP12.61□□□□□ -0.39
HDAC9-225ENST00000490851 PI4KAP2A4QPH2 592 aa12.61□□□□□ -0.39
HDAC9-225ENST00000490851 MYL6BP14649 208 aa12.61□□□□□ -0.39
HDAC9-225ENST00000490851 SMC5Q8IY18 1101 aa12.61□□□□□ -0.39
HDAC9-225ENST00000490851 PI4KAP1Q8N8J0 262 aa12.61□□□□□ -0.39
HDAC9-225ENST00000490851 IL27Q8NEV9 243 aa12.61□□□□□ -0.39
HDAC9-225ENST00000490851 APBB1O00213 710 aa12.6□□□□□ -0.39
HDAC9-225ENST00000490851 CACNA1FO60840 1977 aa12.6□□□□□ -0.39
HDAC9-225ENST00000490851 HEG1Q9ULI3 1381 aa12.6□□□□□ -0.39
HDAC9-225ENST00000490851 MSH5O43196 834 aa12.6□□□□□ -0.39
HDAC9-225ENST00000490851 ANKRD45Q5TZF3 282 aa12.6□□□□□ -0.39
HDAC9-225ENST00000490851 CCDC9Q9Y3X0 531 aaKnown RBP12.6□□□□□ -0.39
HDAC9-225ENST00000490851 KAT6BQ8WYB5 2073 aa12.6□□□□□ -0.39
HDAC9-225ENST00000490851 MRC1P22897 1456 aa12.59□□□□□ -0.39
HDAC9-225ENST00000490851 FAM161AQ3B820 660 aa12.59□□□□□ -0.39
HDAC9-225ENST00000490851 CEP85Q6P2H3 762 aa12.59□□□□□ -0.39
HDAC9-225ENST00000490851 C5P01031 1676 aa12.59□□□□□ -0.39
HDAC9-225ENST00000490851 PLEKHG2Q9H7P9 1386 aa12.59□□□□□ -0.39
HDAC9-225ENST00000490851 PTCD1O75127 700 aaKnown RBP12.59□□□□□ -0.39
HDAC9-225ENST00000490851 FMNL2Q96PY5 1086 aa12.59□□□□□ -0.39
HDAC9-225ENST00000490851 USP16Q9Y5T5 823 aa12.59□□□□□ -0.39
HDAC9-225ENST00000490851 ATP10DQ9P241 1426 aa12.58□□□□□ -0.39
HDAC9-225ENST00000490851 SHANK3Q9BYB0 1731 aa12.58□□□□□ -0.4
HDAC9-225ENST00000490851 C8orf34Q49A92 452 aa12.58□□□□□ -0.4
HDAC9-225ENST00000490851 DNAAF4Q8WXU2 420 aa12.58□□□□□ -0.4
HDAC9-225ENST00000490851 A0A0G2JS52 829 aa12.58□□□□□ -0.4
HDAC9-225ENST00000490851 NUCB1Q02818 461 aa12.58□□□□□ -0.4
HDAC9-225ENST00000490851 ANKRD44Q8N8A2 993 aa12.58□□□□□ -0.4
HDAC9-225ENST00000490851 GNAI2P04899 355 aa12.57□□□□□ -0.4
HDAC9-225ENST00000490851 SNRPA1P09661 255 aaKnown RBP12.57□□□□□ -0.4
HDAC9-225ENST00000490851 CHD1LQ86WJ1 897 aa12.57□□□□□ -0.4
HDAC9-225ENST00000490851 ZFP91Q96JP5 570 aaPredicted RBP12.57□□□□□ -0.4
HDAC9-225ENST00000490851 SRCIN1Q9C0H9 1055 aa12.57□□□□□ -0.4
HDAC9-225ENST00000490851 MAP3K2Q9Y2U5 619 aa12.57□□□□□ -0.4
HDAC9-225ENST00000490851 PLCH1Q4KWH8 1693 aa12.57□□□□□ -0.4
HDAC9-225ENST00000490851 ADCY9O60503 1353 aa12.57□□□□□ -0.4
HDAC9-225ENST00000490851 ERVV-2B6SEH9 535 aa12.57□□□□□ -0.4
HDAC9-225ENST00000490851 GCC1Q96CN9 775 aa12.57□□□□□ -0.4
HDAC9-225ENST00000490851 DDX21Q9NR30 783 aaKnown RBP eCLIP12.57□□□□□ -0.4
HDAC9-225ENST00000490851 HYPKQ9NX55 129 aa12.57□□□□□ -0.4
HDAC9-225ENST00000490851 PDIA6Q15084 440 aa12.56□□□□□ -0.4
HDAC9-225ENST00000490851 TMOD3Q9NYL9 352 aa12.56□□□□□ -0.4
HDAC9-225ENST00000490851 LRRFIP2Q9Y608 721 aaKnown RBP12.56□□□□□ -0.4
HDAC9-225ENST00000490851 GNAI3P08754 354 aa12.56□□□□□ -0.4
HDAC9-225ENST00000490851 UBTFL1P0CB47 393 aaPredicted RBP12.56□□□□□ -0.4
HDAC9-225ENST00000490851 NKX1-1Q15270 411 aaPredicted RBP12.56□□□□□ -0.4
HDAC9-225ENST00000490851 RPAP2Q8IXW5 612 aaPredicted RBP12.56□□□□□ -0.4
HDAC9-225ENST00000490851 SYTL4Q96C24 671 aaPredicted RBP12.56□□□□□ -0.4
HDAC9-225ENST00000490851 USP44Q9H0E7 712 aa12.56□□□□□ -0.4
HDAC9-225ENST00000490851 IGSF3O75054 1194 aa12.55□□□□□ -0.4
HDAC9-225ENST00000490851 XAGE3Q8WTP9 111 aa12.55□□□□□ -0.4
HDAC9-225ENST00000490851 C8orf37Q96NL8 207 aa12.55□□□□□ -0.4
HDAC9-225ENST00000490851 PXDNLA1KZ92 1463 aa12.55□□□□□ -0.4
HDAC9-225ENST00000490851 EXOC5O00471 708 aa12.54□□□□□ -0.4
HDAC9-225ENST00000490851 ANP32AP39687 249 aaKnown RBP12.54□□□□□ -0.4
HDAC9-225ENST00000490851 CWF19L2Q2TBE0 894 aaKnown RBP12.54□□□□□ -0.4
HDAC9-225ENST00000490851 BEND3Q5T5X7 828 aa12.54□□□□□ -0.4
HDAC9-225ENST00000490851 TOGARAM1Q9Y4F4 1720 aa12.54□□□□□ -0.4
HDAC9-225ENST00000490851 KSR2Q6VAB6 950 aa12.54□□□□□ -0.4
HDAC9-225ENST00000490851 COPS6Q7L5N1 327 aa12.54□□□□□ -0.4
HDAC9-225ENST00000490851 DISP2A7MBM2 1401 aa12.54□□□□□ -0.4
HDAC9-225ENST00000490851 SMARCA5O60264 1052 aaPredicted RBP12.53□□□□□ -0.4
HDAC9-225ENST00000490851 NBPF7P0C2Y1 421 aaPredicted RBP12.53□□□□□ -0.4
HDAC9-225ENST00000490851 RIC3Q7Z5B4 369 aa12.53□□□□□ -0.4
HDAC9-225ENST00000490851 ZBTB47Q9UFB7 747 aaPredicted RBP12.53□□□□□ -0.4
HDAC9-225ENST00000490851 PNMA6EA0A0J9YXQ4 647 aa12.53□□□□□ -0.4
HDAC9-225ENST00000490851 HMMRO75330 724 aa12.53□□□□□ -0.4
HDAC9-225ENST00000490851 DDX58O95786 925 aaKnown RBP12.53□□□□□ -0.4
HDAC9-225ENST00000490851 PIGBQ92521 554 aa12.53□□□□□ -0.4
HDAC9-225ENST00000490851 DCTPP1Q9H773 170 aa12.53□□□□□ -0.4
HDAC9-225ENST00000490851 ASAP1Q9ULH1 1129 aa12.53□□□□□ -0.4
HDAC9-225ENST00000490851 SPATA31A1Q5TZJ5 1347 aa12.53□□□□□ -0.4
HDAC9-225ENST00000490851 TICAM2Q86XR7 235 aa12.52□□□□□ -0.4
HDAC9-225ENST00000490851 NGLY1Q96IV0 654 aa12.52□□□□□ -0.4
HDAC9-225ENST00000490851 EXOC6BQ9Y2D4 811 aa12.52□□□□□ -0.4
HDAC9-225ENST00000490851 NCLP19338 710 aaKnown RBP12.52□□□□□ -0.41
HDAC9-225ENST00000490851 RBM42Q9BTD8 480 aaKnown RBP12.52□□□□□ -0.41
HDAC9-225ENST00000490851 A1BGP04217 495 aa12.51□□□□□ -0.41
HDAC9-225ENST00000490851 C16orf71Q8IYS4 520 aaPredicted RBP12.51□□□□□ -0.41
HDAC9-225ENST00000490851 C9orf78Q9NZ63 289 aaPredicted RBP12.51□□□□□ -0.41
HDAC9-225ENST00000490851 ZNF330Q9Y3S2 320 aaPredicted RBP12.51□□□□□ -0.41
HDAC9-225ENST00000490851 N4BP2Q86UW6 1770 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms