RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 CADPS2Q86UW7 1296 aa12.25□□□□□ -0.45
BRD9-209ENST00000490814 CERKQ8TCT0 537 aa12.25□□□□□ -0.45
BRD9-209ENST00000490814 CNKSR2Q8WXI2 1034 aa12.25□□□□□ -0.45
BRD9-209ENST00000490814 GDPD2Q9HCC8 539 aa12.25□□□□□ -0.45
BRD9-209ENST00000490814 CCDC61Q9Y6R9 512 aa12.25□□□□□ -0.45
BRD9-209ENST00000490814 KIAA2012Q0VF49 1180 aa12.25□□□□□ -0.45
BRD9-209ENST00000490814 LRSAM1Q6UWE0 723 aa12.25□□□□□ -0.45
BRD9-209ENST00000490814 G2E3Q7L622 706 aa12.25□□□□□ -0.45
BRD9-209ENST00000490814 NSFL1CQ9UNZ2 370 aaKnown RBP12.25□□□□□ -0.45
BRD9-209ENST00000490814 CD163L1Q9NR16 1453 aa12.25□□□□□ -0.45
BRD9-209ENST00000490814 ARHGEF28Q8N1W1 1705 aaKnown RBP12.24□□□□□ -0.45
BRD9-209ENST00000490814 ADAMTS2O95450 1211 aa12.24□□□□□ -0.45
BRD9-209ENST00000490814 EIF4A2Q14240 407 aaKnown RBP12.24□□□□□ -0.45
BRD9-209ENST00000490814 STK31Q9BXU1 1019 aa12.24□□□□□ -0.45
BRD9-209ENST00000490814 SPDYE4A6NLX3 237 aa12.24□□□□□ -0.45
BRD9-209ENST00000490814 MAP4K4O95819 1239 aaPredicted RBP12.24□□□□□ -0.45
BRD9-209ENST00000490814 HSP90B1P14625 803 aaKnown RBP12.24□□□□□ -0.45
BRD9-209ENST00000490814 PTPRUQ92729 1446 aa12.24□□□□□ -0.45
BRD9-209ENST00000490814 USP32Q8NFA0 1604 aa12.24□□□□□ -0.45
BRD9-209ENST00000490814 MCCP23508 829 aa12.24□□□□□ -0.45
BRD9-209ENST00000490814 LTV1Q96GA3 475 aaPredicted RBP12.24□□□□□ -0.45
BRD9-209ENST00000490814 PDLIM2Q96JY6 352 aa12.24□□□□□ -0.45
BRD9-209ENST00000490814 PTCH1Q13635 1447 aa12.24□□□□□ -0.45
BRD9-209ENST00000490814 TMEM131LA2VDJ0 1609 aa12.23□□□□□ -0.45
BRD9-209ENST00000490814 IBTKQ9P2D0 1353 aaPredicted RBP12.23□□□□□ -0.45
BRD9-209ENST00000490814 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.23□□□□□ -0.457e-6■□□□□ 10.8
BRD9-209ENST00000490814 PHF8Q9UPP1 1060 aa12.23□□□□□ -0.45
BRD9-209ENST00000490814 FAM193AP78312 1265 aa12.23□□□□□ -0.45
BRD9-209ENST00000490814 ABTB2Q8N961 1025 aa12.23□□□□□ -0.45
BRD9-209ENST00000490814 ZBTB9Q96C00 473 aa12.23□□□□□ -0.45
BRD9-209ENST00000490814 CHMP4CQ96CF2 233 aa12.23□□□□□ -0.45
BRD9-209ENST00000490814 LARP6Q9BRS8 491 aaKnown RBP12.23□□□□□ -0.45
BRD9-209ENST00000490814 CWC22Q9HCG8 908 aaKnown RBP12.23□□□□□ -0.45
BRD9-209ENST00000490814 IL1RAPL2Q9NP60 686 aa12.23□□□□□ -0.45
BRD9-209ENST00000490814 PATL2C9JE40 543 aaKnown RBP12.22□□□□□ -0.45
BRD9-209ENST00000490814 DTNBO60941 627 aa12.22□□□□□ -0.45
BRD9-209ENST00000490814 NLRP6P59044 892 aa12.22□□□□□ -0.45
BRD9-209ENST00000490814 TRIM34Q9BYJ4 488 aa12.22□□□□□ -0.45
BRD9-209ENST00000490814 CCDC66A2RUB6 948 aa12.22□□□□□ -0.45
BRD9-209ENST00000490814 MCM5P33992 734 aa12.22□□□□□ -0.45
BRD9-209ENST00000490814 PDE1AP54750 535 aa12.22□□□□□ -0.45
BRD9-209ENST00000490814 ZC3H6P61129 1189 aaKnown RBP12.22□□□□□ -0.45
BRD9-209ENST00000490814 TMX3Q96JJ7 454 aa12.22□□□□□ -0.45
BRD9-209ENST00000490814 TSPY26PQ9H489 355 aa12.22□□□□□ -0.45
BRD9-209ENST00000490814 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.22□□□□□ -0.45
BRD9-209ENST00000490814 MED14O60244 1454 aa12.22□□□□□ -0.45
BRD9-209ENST00000490814 CLEC17AQ6ZS10 378 aa12.21□□□□□ -0.45
BRD9-209ENST00000490814 C17orf53Q8N3J3 647 aaPredicted RBP12.21□□□□□ -0.45
BRD9-209ENST00000490814 PSEN1P49768 467 aa12.21□□□□□ -0.45
BRD9-209ENST00000490814 GNAI2P04899 355 aa12.21□□□□□ -0.46
BRD9-209ENST00000490814 AMPHP49418 695 aa12.21□□□□□ -0.46
BRD9-209ENST00000490814 AXDND1Q5T1B0 1012 aaPredicted RBP12.21□□□□□ -0.46
BRD9-209ENST00000490814 MYRIPQ8NFW9 859 aa12.2□□□□□ -0.46
BRD9-209ENST00000490814 TIGD1Q96MW7 591 aa12.2□□□□□ -0.46
BRD9-209ENST00000490814 ACEP12821 1306 aa12.2□□□□□ -0.46
BRD9-209ENST00000490814 RTL1A6NKG5 1358 aa12.2□□□□□ -0.46
BRD9-209ENST00000490814 ZNF710Q8N1W2 664 aa12.2□□□□□ -0.46
BRD9-209ENST00000490814 CCDC9Q9Y3X0 531 aaKnown RBP12.2□□□□□ -0.46
BRD9-209ENST00000490814 KRT28Q7Z3Y7 464 aa12.2□□□□□ -0.46
BRD9-209ENST00000490814 ZNF622Q969S3 477 aaKnown RBP eCLIP12.2□□□□□ -0.463e-7■■■■□ 24.4
BRD9-209ENST00000490814 LRRCC1Q9C099 1032 aa12.2□□□□□ -0.46
BRD9-209ENST00000490814 ALKQ9UM73 1620 aa12.19□□□□□ -0.46
BRD9-209ENST00000490814 PIK3R4Q99570 1358 aa12.19□□□□□ -0.46
BRD9-209ENST00000490814 CHL1O00533 1208 aa12.19□□□□□ -0.46
BRD9-209ENST00000490814 MBD3O95983 291 aa12.19□□□□□ -0.46
BRD9-209ENST00000490814 TTC12Q9H892 705 aaPredicted RBP12.19□□□□□ -0.46
BRD9-209ENST00000490814 PALD1Q9ULE6 856 aa12.19□□□□□ -0.46
BRD9-209ENST00000490814 NUTM1Q86Y26 1132 aa12.19□□□□□ -0.46
BRD9-209ENST00000490814 SYAP1Q96A49 352 aaPredicted RBP12.19□□□□□ -0.46
BRD9-209ENST00000490814 USP25Q9UHP3 1055 aa12.19□□□□□ -0.46
BRD9-209ENST00000490814 ZDHHC9Q9Y397 364 aa12.19□□□□□ -0.46
BRD9-209ENST00000490814 MX1P20591 662 aa12.19□□□□□ -0.46
BRD9-209ENST00000490814 PRR36Q9H6K5 1346 aa12.18□□□□□ -0.46
BRD9-209ENST00000490814 UBR1Q8IWV7 1749 aa12.18□□□□□ -0.46
BRD9-209ENST00000490814 EIF2S2P20042 333 aaKnown RBP12.18□□□□□ -0.46
BRD9-209ENST00000490814 OS9Q13438 667 aaPredicted RBP12.18□□□□□ -0.46
BRD9-209ENST00000490814 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.17□□□□□ -0.46
BRD9-209ENST00000490814 PTPRCP08575 1304 aa12.17□□□□□ -0.46
BRD9-209ENST00000490814 EDC4Q6P2E9 1401 aaKnown RBP12.17□□□□□ -0.46
BRD9-209ENST00000490814 CYP2E1P05181 493 aaPredicted RBP12.17□□□□□ -0.46
BRD9-209ENST00000490814 CCT4P50991 539 aaKnown RBP12.17□□□□□ -0.46
BRD9-209ENST00000490814 GEMIN8Q9NWZ8 242 aaKnown RBP12.17□□□□□ -0.46
BRD9-209ENST00000490814 LRRFIP2Q9Y608 721 aaKnown RBP12.17□□□□□ -0.46
BRD9-209ENST00000490814 PNMA6EA0A0J9YXQ4 647 aa12.17□□□□□ -0.46
BRD9-209ENST00000490814 NOLC1Q14978 699 aaKnown RBP eCLIP12.17□□□□□ -0.46
BRD9-209ENST00000490814 MTHFSDQ2M296 383 aaKnown RBP12.17□□□□□ -0.46
BRD9-209ENST00000490814 PDCL2Q8N4E4 241 aa12.17□□□□□ -0.46
BRD9-209ENST00000490814 ESYT1Q9BSJ8 1104 aa12.17□□□□□ -0.46
BRD9-209ENST00000490814 YY1AP1Q9H869 796 aa12.17□□□□□ -0.46
BRD9-209ENST00000490814 KIF3AQ9Y496 699 aa12.17□□□□□ -0.46
BRD9-209ENST00000490814 SURF6O75683 361 aaKnown RBP12.16□□□□□ -0.46
BRD9-209ENST00000490814 CHRNA2Q15822 529 aa12.16□□□□□ -0.46
BRD9-209ENST00000490814 MEX3CQ5U5Q3 659 aaKnown RBP12.16□□□□□ -0.46
BRD9-209ENST00000490814 HMGN5P82970 282 aaKnown RBP12.16□□□□□ -0.46
BRD9-209ENST00000490814 TSPYL1Q9H0U9 437 aa12.16□□□□□ -0.46
BRD9-209ENST00000490814 ARHGAP23Q9P227 1491 aa12.15□□□□□ -0.46
BRD9-209ENST00000490814 FLIIQ13045 1269 aa12.15□□□□□ -0.46
BRD9-209ENST00000490814 BRINP3Q76B58 766 aa12.15□□□□□ -0.46
BRD9-209ENST00000490814 DDX54Q8TDD1 881 aaKnown RBP12.15□□□□□ -0.46
BRD9-209ENST00000490814 CHMP3Q9Y3E7 222 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms