RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 EYA1Q99502 592 aa10.19□□□□□ -0.78
CLDN1-202ENST00000490800 TFCP2L1Q9NZI6 479 aa10.19□□□□□ -0.78
CLDN1-202ENST00000490800 RGPD2P0DJD1 1756 aa10.19□□□□□ -0.78
CLDN1-202ENST00000490800 FAM208AQ9UK61 1670 aaKnown RBP10.18□□□□□ -0.78
CLDN1-202ENST00000490800 NSD2O96028 1365 aa10.18□□□□□ -0.78
CLDN1-202ENST00000490800 NPC1L1Q9UHC9 1359 aa10.18□□□□□ -0.78
CLDN1-202ENST00000490800 DPYSL4O14531 572 aa10.18□□□□□ -0.78
CLDN1-202ENST00000490800 CYP27B1O15528 508 aa10.18□□□□□ -0.78
CLDN1-202ENST00000490800 POTEIP0CG38 1075 aa10.18□□□□□ -0.78
CLDN1-202ENST00000490800 FOXK1P85037 733 aa10.18□□□□□ -0.78
CLDN1-202ENST00000490800 RALBP1Q15311 655 aa10.18□□□□□ -0.78
CLDN1-202ENST00000490800 MPRIPQ6WCQ1 1025 aa10.18□□□□□ -0.78
CLDN1-202ENST00000490800 PLPP6Q8IY26 295 aa10.18□□□□□ -0.78
CLDN1-202ENST00000490800 SYT17Q9BSW7 474 aa10.18□□□□□ -0.78
CLDN1-202ENST00000490800 FHDC1Q9C0D6 1143 aaPredicted RBP10.18□□□□□ -0.78
CLDN1-202ENST00000490800 CCNL1Q9UK58 526 aaPredicted RBP10.18□□□□□ -0.78
CLDN1-202ENST00000490800 ARIH1Q9Y4X5 557 aaPredicted RBP10.18□□□□□ -0.78
CLDN1-202ENST00000490800 BTAF1O14981 1849 aa10.18□□□□□ -0.78
CLDN1-202ENST00000490800 CASZ1Q86V15 1759 aa10.17□□□□□ -0.78
CLDN1-202ENST00000490800 PCDH11XQ9BZA7 1347 aa10.17□□□□□ -0.78
CLDN1-202ENST00000490800 PCDH11YQ9BZA8 1340 aa10.17□□□□□ -0.78
CLDN1-202ENST00000490800 CC2D1BQ5T0F9 858 aaKnown RBP10.17□□□□□ -0.78
CLDN1-202ENST00000490800 ARXQ96QS3 562 aa10.17□□□□□ -0.78
CLDN1-202ENST00000490800 EMILIN3Q9NT22 766 aa10.17□□□□□ -0.78
CLDN1-202ENST00000490800 PNPLA7Q6ZV29 1317 aa10.16□□□□□ -0.78
CLDN1-202ENST00000490800 POTEFA5A3E0 1075 aa10.16□□□□□ -0.78
CLDN1-202ENST00000490800 YY1P25490 414 aa10.16□□□□□ -0.78
CLDN1-202ENST00000490800 CCDC184Q52MB2 194 aa10.16□□□□□ -0.78
CLDN1-202ENST00000490800 SLC16A10Q8TF71 515 aa10.16□□□□□ -0.78
CLDN1-202ENST00000490800 SPG7Q9UQ90 795 aa10.16□□□□□ -0.78
CLDN1-202ENST00000490800 MYBBP1AQ9BQG0 1328 aaKnown RBP10.15□□□□□ -0.78
CLDN1-202ENST00000490800 KIF3CO14782 793 aa10.15□□□□□ -0.78
CLDN1-202ENST00000490800 EIF4A2Q14240 407 aaKnown RBP10.15□□□□□ -0.78
CLDN1-202ENST00000490800 KIF20BQ96Q89 1820 aa10.14□□□□□ -0.79
CLDN1-202ENST00000490800 TMEM92Q6UXU6 159 aa10.14□□□□□ -0.79
CLDN1-202ENST00000490800 C3orf67Q6ZVT6 689 aa10.14□□□□□ -0.79
CLDN1-202ENST00000490800 COL23A1Q86Y22 540 aaPredicted RBP10.14□□□□□ -0.79
CLDN1-202ENST00000490800 PIGBQ92521 554 aa10.14□□□□□ -0.79
CLDN1-202ENST00000490800 PAPPAQ13219 1627 aa10.14□□□□□ -0.79
CLDN1-202ENST00000490800 POLD1P28340 1107 aa10.13□□□□□ -0.79
CLDN1-202ENST00000490800 MORC1Q86VD1 984 aa10.13□□□□□ -0.79
CLDN1-202ENST00000490800 IFNL2Q8IZJ0 200 aa10.13□□□□□ -0.79
CLDN1-202ENST00000490800 SHANK3Q9BYB0 1731 aa10.13□□□□□ -0.79
CLDN1-202ENST00000490800 PHKG2P15735 406 aa10.12□□□□□ -0.79
CLDN1-202ENST00000490800 SMYD5Q6GMV2 418 aa10.12□□□□□ -0.79
CLDN1-202ENST00000490800 SMARCC1Q92922 1105 aaPredicted RBP10.12□□□□□ -0.79
CLDN1-202ENST00000490800 YTHDC1Q96MU7 727 aaKnown RBP10.12□□□□□ -0.79
CLDN1-202ENST00000490800 MRS2Q9HD23 443 aa10.12□□□□□ -0.79
CLDN1-202ENST00000490800 NCAPD2Q15021 1401 aa10.12□□□□□ -0.79
CLDN1-202ENST00000490800 DOT1LQ8TEK3 1739 aa10.12□□□□□ -0.79
CLDN1-202ENST00000490800 PALLDQ8WX93 1383 aa10.12□□□□□ -0.79
CLDN1-202ENST00000490800 PPP2R1AP30153 589 aa10.11□□□□□ -0.79
CLDN1-202ENST00000490800 MAP2P11137 1827 aaKnown RBP10.1□□□□□ -0.79
CLDN1-202ENST00000490800 HMGB2P26583 209 aaKnown RBP10.1□□□□□ -0.79
CLDN1-202ENST00000490800 MLLT3P42568 568 aaPredicted RBP10.1□□□□□ -0.79
CLDN1-202ENST00000490800 MSL1Q68DK7 614 aa10.1□□□□□ -0.79
CLDN1-202ENST00000490800 SMIM5Q71RC9 77 aa10.1□□□□□ -0.79
CLDN1-202ENST00000490800 TMOD3Q9NYL9 352 aa10.1□□□□□ -0.79
CLDN1-202ENST00000490800 ASAP1Q9ULH1 1129 aa10.1□□□□□ -0.79
CLDN1-202ENST00000490800 UTRNP46939 3433 aa10.1□□□□□ -0.79
CLDN1-202ENST00000490800 IGSF1Q8N6C5 1336 aa10.09□□□□□ -0.79
CLDN1-202ENST00000490800 LOC102724428A0A0B4J2F2 783 aa10.09□□□□□ -0.79
CLDN1-202ENST00000490800 SIK1P57059 783 aa10.09□□□□□ -0.79
CLDN1-202ENST00000490800 GPR162Q16538 588 aa10.09□□□□□ -0.79
CLDN1-202ENST00000490800 PLEKHO1Q53GL0 409 aaPredicted RBP10.09□□□□□ -0.79
CLDN1-202ENST00000490800 AMIGO3Q86WK7 504 aa10.09□□□□□ -0.79
CLDN1-202ENST00000490800 FLAD1Q8NFF5 587 aa10.09□□□□□ -0.79
CLDN1-202ENST00000490800 LY75O60449 1722 aa10.09□□□□□ -0.79
CLDN1-202ENST00000490800 ATP6V1AP38606 617 aa10.08□□□□□ -0.8
CLDN1-202ENST00000490800 PDIA6Q15084 440 aa10.08□□□□□ -0.8
CLDN1-202ENST00000490800 AEBP1Q8IUX7 1158 aa10.08□□□□□ -0.8
CLDN1-202ENST00000490800 LINC00116Q8NCU8 138 aa10.08□□□□□ -0.8
CLDN1-202ENST00000490800 NLGN2Q8NFZ4 835 aa10.08□□□□□ -0.8
CLDN1-202ENST00000490800 AK7Q96M32 723 aa10.08□□□□□ -0.8
CLDN1-202ENST00000490800 ATG3Q9NT62 314 aa10.08□□□□□ -0.8
CLDN1-202ENST00000490800 MAP3K5Q99683 1374 aa10.08□□□□□ -0.8
CLDN1-202ENST00000490800 SPDYE16A6NNV3 312 aaPredicted RBP10.07□□□□□ -0.8
CLDN1-202ENST00000490800 ERVV-2B6SEH9 535 aa10.07□□□□□ -0.8
CLDN1-202ENST00000490800 PHF14O94880 888 aa10.07□□□□□ -0.8
CLDN1-202ENST00000490800 IL13P35225 146 aa10.07□□□□□ -0.8
CLDN1-202ENST00000490800 ITPK1Q13572 414 aa10.07□□□□□ -0.8
CLDN1-202ENST00000490800 AMOTQ4VCS5 1084 aa10.07□□□□□ -0.8
CLDN1-202ENST00000490800 SULT6B1Q6IMI4 303 aa10.07□□□□□ -0.8
CLDN1-202ENST00000490800 PNISRQ8TF01 805 aaKnown RBP10.07□□□□□ -0.8
CLDN1-202ENST00000490800 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.06□□□□□ -0.8
CLDN1-202ENST00000490800 HSP90AB1P08238 724 aaKnown RBP10.06□□□□□ -0.8
CLDN1-202ENST00000490800 MTHFSP49914 203 aa10.06□□□□□ -0.8
CLDN1-202ENST00000490800 CABP4P57796 275 aa10.06□□□□□ -0.8
CLDN1-202ENST00000490800 MAP3K9P80192 1104 aa10.06□□□□□ -0.8
CLDN1-202ENST00000490800 ZNF530Q6P9A1 599 aaPredicted RBP10.06□□□□□ -0.8
CLDN1-202ENST00000490800 FAM9BQ8IZU0 186 aa10.06□□□□□ -0.8
CLDN1-202ENST00000490800 DCAF5Q96JK2 942 aa10.06□□□□□ -0.8
CLDN1-202ENST00000490800 ANKRD26Q9UPS8 1709 aa10.06□□□□□ -0.8
CLDN1-202ENST00000490800 PKD1L3Q7Z443 1732 aa10.05□□□□□ -0.8
CLDN1-202ENST00000490800 TOGARAM1Q9Y4F4 1720 aa10.05□□□□□ -0.8
CLDN1-202ENST00000490800 ZNF784Q8NCA9 323 aaPredicted RBP10.05□□□□□ -0.8
CLDN1-202ENST00000490800 ZC3H15Q8WU90 426 aaKnown RBP10.05□□□□□ -0.8
CLDN1-202ENST00000490800 SLC4A9Q96Q91 983 aa10.05□□□□□ -0.8
CLDN1-202ENST00000490800 QSER1Q2KHR3 1735 aa10.04□□□□□ -0.8
CLDN1-202ENST00000490800 GNPATO15228 680 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms