RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 USPL1Q5W0Q7 1092 aa21.15■□□□□ 0.98
COL2A1-207ENST00000490609 CHRNA5P30532 468 aa21.14■□□□□ 0.97
COL2A1-207ENST00000490609 CCDC88AQ3V6T2 1871 aa21.13■□□□□ 0.97
COL2A1-207ENST00000490609 DLEC1Q9Y238 1755 aa21.13■□□□□ 0.97
COL2A1-207ENST00000490609 DIAPH1O60610 1272 aaKnown RBP21.13■□□□□ 0.97
COL2A1-207ENST00000490609 ZBTB1Q9Y2K1 713 aa21.13■□□□□ 0.97
COL2A1-207ENST00000490609 PIM2Q9P1W9 311 aa21.12■□□□□ 0.97
COL2A1-207ENST00000490609 NFIXQ14938 502 aa21.11■□□□□ 0.97
COL2A1-207ENST00000490609 IL17REQ8NFR9 667 aa21.11■□□□□ 0.97
COL2A1-207ENST00000490609 NMRK2Q9NPI5 230 aa21.11■□□□□ 0.97
COL2A1-207ENST00000490609 NARFQ9UHQ1 456 aa21.11■□□□□ 0.97
COL2A1-207ENST00000490609 ANKRD31Q8N7Z5 1873 aa21.11■□□□□ 0.97
COL2A1-207ENST00000490609 NPC1L1Q9UHC9 1359 aa21.1■□□□□ 0.97
COL2A1-207ENST00000490609 C9orf131Q5VYM1 1079 aa21.09■□□□□ 0.97
COL2A1-207ENST00000490609 VSIG10Q8N0Z9 540 aa21.09■□□□□ 0.97
COL2A1-207ENST00000490609 COL15A1P39059 1388 aa21.09■□□□□ 0.97
COL2A1-207ENST00000490609 PRELPP51888 382 aa21.08■□□□□ 0.97
COL2A1-207ENST00000490609 DALRD3Q5D0E6 543 aaKnown RBP21.08■□□□□ 0.97
COL2A1-207ENST00000490609 ZPR1O75312 459 aa21.07■□□□□ 0.96
COL2A1-207ENST00000490609 EIF5P55010 431 aaKnown RBP21.06■□□□□ 0.96
COL2A1-207ENST00000490609 DNAJC5GQ8N7S2 189 aa21.06■□□□□ 0.96
COL2A1-207ENST00000490609 ZNF496Q96IT1 587 aaPredicted RBP21.06■□□□□ 0.96
COL2A1-207ENST00000490609 TOMM70O94826 608 aa21.05■□□□□ 0.96
COL2A1-207ENST00000490609 PHACTR3Q96KR7 559 aa21.05■□□□□ 0.96
COL2A1-207ENST00000490609 CARMIL3Q8ND23 1372 aa21.05■□□□□ 0.96
COL2A1-207ENST00000490609 SERPINB2P05120 415 aa21.03■□□□□ 0.96
COL2A1-207ENST00000490609 CANXP27824 592 aaKnown RBP21.03■□□□□ 0.96
COL2A1-207ENST00000490609 CNGB1Q14028 1251 aaPredicted RBP21.03■□□□□ 0.96
COL2A1-207ENST00000490609 SCN7AQ01118 1682 aa21.02■□□□□ 0.96
COL2A1-207ENST00000490609 CEMIPQ8WUJ3 1361 aa21.02■□□□□ 0.96
COL2A1-207ENST00000490609 KCNQ3O43525 872 aa21.02■□□□□ 0.96
COL2A1-207ENST00000490609 ZNF790Q6PG37 636 aa21.02■□□□□ 0.96
COL2A1-207ENST00000490609 COL11A2P13942 1736 aaPredicted RBP21.01■□□□□ 0.95
COL2A1-207ENST00000490609 WDR90Q96KV7 1748 aa21.01■□□□□ 0.95
COL2A1-207ENST00000490609 HEG1Q9ULI3 1381 aa21.01■□□□□ 0.95
COL2A1-207ENST00000490609 GNAT3A8MTJ3 354 aa21■□□□□ 0.95
COL2A1-207ENST00000490609 U2SURPO15042 1029 aaKnown RBP21■□□□□ 0.95
COL2A1-207ENST00000490609 RASSF7Q02833 373 aa21■□□□□ 0.95
COL2A1-207ENST00000490609 IFFO2Q5TF58 517 aa21■□□□□ 0.95
COL2A1-207ENST00000490609 RNF181Q9P0P0 153 aa21■□□□□ 0.95
COL2A1-207ENST00000490609 TNRC6CQ9HCJ0 1690 aaKnown RBP20.99■□□□□ 0.95
COL2A1-207ENST00000490609 FER1L6Q2WGJ9 1857 aa20.99■□□□□ 0.95
COL2A1-207ENST00000490609 TBC1D9BQ66K14 1250 aa20.99■□□□□ 0.95
COL2A1-207ENST00000490609 RSPH6AQ9H0K4 717 aa20.99■□□□□ 0.95
COL2A1-207ENST00000490609 DICER1Q9UPY3 1922 aaKnown RBP20.99■□□□□ 0.95
COL2A1-207ENST00000490609 BCORQ6W2J9 1755 aa20.98■□□□□ 0.95
COL2A1-207ENST00000490609 A1BGP04217 495 aa20.97■□□□□ 0.95
COL2A1-207ENST00000490609 APLP1P51693 650 aa20.97■□□□□ 0.95
COL2A1-207ENST00000490609 GAS2L2Q8NHY3 880 aa20.97■□□□□ 0.95
COL2A1-207ENST00000490609 RBM46Q8TBY0 533 aaKnown RBP20.97■□□□□ 0.95
COL2A1-207ENST00000490609 RRAGCQ9HB90 399 aa20.97■□□□□ 0.95
COL2A1-207ENST00000490609 CACNA1SQ13698 1873 aa20.96■□□□□ 0.95
COL2A1-207ENST00000490609 TIAM2Q8IVF5 1701 aa20.96■□□□□ 0.95
COL2A1-207ENST00000490609 STARD3NLO95772 234 aa20.96■□□□□ 0.95
COL2A1-207ENST00000490609 BICDL1Q6ZP65 573 aa20.96■□□□□ 0.95
COL2A1-207ENST00000490609 TTC5Q8N0Z6 440 aa20.96■□□□□ 0.95
COL2A1-207ENST00000490609 TBC1D2BQ9UPU7 963 aa20.96■□□□□ 0.95
COL2A1-207ENST00000490609 SLX4Q8IY92 1834 aa20.96■□□□□ 0.95
COL2A1-207ENST00000490609 PRAMEF22A3QJZ6 481 aa20.95■□□□□ 0.94
COL2A1-207ENST00000490609 HTRA3P83110 453 aa20.95■□□□□ 0.94
COL2A1-207ENST00000490609 TEFQ10587 303 aa20.95■□□□□ 0.94
COL2A1-207ENST00000490609 C2CD5Q86YS7 1000 aa20.95■□□□□ 0.94
COL2A1-207ENST00000490609 CCDC24Q8N4L8 307 aa20.95■□□□□ 0.94
COL2A1-207ENST00000490609 NFKBIEO00221 500 aa20.94■□□□□ 0.94
COL2A1-207ENST00000490609 PRKAR2BP31323 418 aa20.94■□□□□ 0.94
COL2A1-207ENST00000490609 TTLL6Q8N841 843 aa20.94■□□□□ 0.94
COL2A1-207ENST00000490609 USP16Q9Y5T5 823 aa20.94■□□□□ 0.94
COL2A1-207ENST00000490609 DLG5Q8TDM6 1919 aa20.94■□□□□ 0.94
COL2A1-207ENST00000490609 CAMTA2O94983 1202 aa20.93■□□□□ 0.94
COL2A1-207ENST00000490609 IL6STP40189 918 aaPredicted RBP20.93■□□□□ 0.94
COL2A1-207ENST00000490609 PRR5LQ6MZQ0 368 aa20.93■□□□□ 0.94
COL2A1-207ENST00000490609 TEX13AQ9BXU3 409 aaPredicted RBP20.93■□□□□ 0.94
COL2A1-207ENST00000490609 A0A087WZG4 1122 aa20.92■□□□□ 0.94
COL2A1-207ENST00000490609 ARFGEF2Q9Y6D5 1785 aa20.92■□□□□ 0.94
COL2A1-207ENST00000490609 POTECB2RU33 542 aa20.91■□□□□ 0.94
COL2A1-207ENST00000490609 H0YIN7 160 aa20.91■□□□□ 0.94
COL2A1-207ENST00000490609 LMNB1P20700 586 aa20.91■□□□□ 0.94
COL2A1-207ENST00000490609 PPP2R1AP30153 589 aa20.91■□□□□ 0.94
COL2A1-207ENST00000490609 PIP4K2AP48426 406 aaPredicted RBP20.91■□□□□ 0.94
COL2A1-207ENST00000490609 KDM2BQ8NHM5 1336 aa20.91■□□□□ 0.94
COL2A1-207ENST00000490609 FMNL2Q96PY5 1086 aa20.91■□□□□ 0.94
COL2A1-207ENST00000490609 BTBD11A6QL63 1104 aa20.9■□□□□ 0.94
COL2A1-207ENST00000490609 BRIP1Q9BX63 1249 aa20.9■□□□□ 0.94
COL2A1-207ENST00000490609 FSTL1Q12841 308 aa20.89■□□□□ 0.93
COL2A1-207ENST00000490609 MCM10Q7L590 875 aa20.89■□□□□ 0.93
COL2A1-207ENST00000490609 ZC3H4Q9UPT8 1303 aaKnown RBP20.88■□□□□ 0.93
COL2A1-207ENST00000490609 GLTPD2A6NH11 291 aa20.88■□□□□ 0.93
COL2A1-207ENST00000490609 NBPF26B4DH59 902 aa20.87■□□□□ 0.93
COL2A1-207ENST00000490609 DCTN1Q14203 1278 aa20.87■□□□□ 0.93
COL2A1-207ENST00000490609 NBPF10Q6P3W6 841 aaKnown RBP20.87■□□□□ 0.93
COL2A1-207ENST00000490609 NBPF15Q8N660 670 aa20.87■□□□□ 0.93
COL2A1-207ENST00000490609 ZNF330Q9Y3S2 320 aaPredicted RBP20.87■□□□□ 0.93
COL2A1-207ENST00000490609 C21orf2O43822 256 aa20.85■□□□□ 0.93
COL2A1-207ENST00000490609 ZNF622Q969S3 477 aaKnown RBP eCLIP20.85■□□□□ 0.93
COL2A1-207ENST00000490609 U2AF1L5P0DN76 240 aaPredicted RBP20.84■□□□□ 0.93
COL2A1-207ENST00000490609 PDE6BP35913 854 aa20.84■□□□□ 0.93
COL2A1-207ENST00000490609 U2AF1Q01081 240 aaKnown RBP eCLIP20.84■□□□□ 0.93
COL2A1-207ENST00000490609 DZIP3Q86Y13 1208 aaKnown RBP20.84■□□□□ 0.93
COL2A1-207ENST00000490609 C16orf71Q8IYS4 520 aaPredicted RBP20.84■□□□□ 0.93
COL2A1-207ENST00000490609 ZNF219Q9P2Y4 722 aaPredicted RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms