RNA–Protein interactions for RNA: ENST00000490540.1

ASIC3-208, Transcript of acid sensing ion channel subunit 3, humanhuman

TSL 2

Gene ASIC3, Length 520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC3-208ENST00000490540 U2AF1Q01081 240 aaKnown RBP eCLIP16.06■□□□□ 0.16
ASIC3-208ENST00000490540 C16orf71Q8IYS4 520 aaPredicted RBP16.06■□□□□ 0.16
ASIC3-208ENST00000490540 KIF13BQ9NQT8 1826 aa16.05■□□□□ 0.16
ASIC3-208ENST00000490540 USP42Q9H9J4 1324 aaKnown RBP16.05■□□□□ 0.16
ASIC3-208ENST00000490540 CYP19A1P11511 503 aaPredicted RBP16.05■□□□□ 0.16
ASIC3-208ENST00000490540 HTRA3P83110 453 aa16.05■□□□□ 0.16
ASIC3-208ENST00000490540 TEFQ10587 303 aa16.05■□□□□ 0.16
ASIC3-208ENST00000490540 FKBP8Q14318 412 aa16.05■□□□□ 0.16
ASIC3-208ENST00000490540 PIM2Q9P1W9 311 aa16.05■□□□□ 0.16
ASIC3-208ENST00000490540 NUDCQ9Y266 331 aa16.05■□□□□ 0.16
ASIC3-208ENST00000490540 CHRNA5P30532 468 aa16.04■□□□□ 0.16
ASIC3-208ENST00000490540 DDR1Q08345 913 aa16.04■□□□□ 0.16
ASIC3-208ENST00000490540 DALRD3Q5D0E6 543 aaKnown RBP16.04■□□□□ 0.16
ASIC3-208ENST00000490540 ZBTB1Q9Y2K1 713 aa16.04■□□□□ 0.16
ASIC3-208ENST00000490540 SOS1Q07889 1333 aaPredicted RBP16.03■□□□□ 0.16
ASIC3-208ENST00000490540 TTC5Q8N0Z6 440 aa16.03■□□□□ 0.16
ASIC3-208ENST00000490540 RBM46Q8TBY0 533 aaKnown RBP16.03■□□□□ 0.16
ASIC3-208ENST00000490540 RNF181Q9P0P0 153 aa16.03■□□□□ 0.16
ASIC3-208ENST00000490540 MYH14Q7Z406 1995 aaKnown RBP16.03■□□□□ 0.16
ASIC3-208ENST00000490540 ZNF496Q96IT1 587 aaPredicted RBP16.02■□□□□ 0.16
ASIC3-208ENST00000490540 CEMIPQ8WUJ3 1361 aa16.01■□□□□ 0.15
ASIC3-208ENST00000490540 VIRMAQ69YN4 1812 aaKnown RBP16.01■□□□□ 0.15
ASIC3-208ENST00000490540 UBR2Q8IWV8 1755 aa16.01■□□□□ 0.15
ASIC3-208ENST00000490540 KCNQ3O43525 872 aa16.01■□□□□ 0.15
ASIC3-208ENST00000490540 CANXP27824 592 aaKnown RBP16.01■□□□□ 0.15
ASIC3-208ENST00000490540 USPL1Q5W0Q7 1092 aa16.01■□□□□ 0.15
ASIC3-208ENST00000490540 RRAGCQ9HB90 399 aa16.01■□□□□ 0.15
ASIC3-208ENST00000490540 COL15A1P39059 1388 aa16■□□□□ 0.15
ASIC3-208ENST00000490540 KDM2BQ8NHM5 1336 aa16■□□□□ 0.15
ASIC3-208ENST00000490540 ZNF790Q6PG37 636 aa16■□□□□ 0.15
ASIC3-208ENST00000490540 MCM10Q7L590 875 aa16■□□□□ 0.15
ASIC3-208ENST00000490540 VSIG10Q8N0Z9 540 aa16■□□□□ 0.15
ASIC3-208ENST00000490540 HEG1Q9ULI3 1381 aa16■□□□□ 0.15
ASIC3-208ENST00000490540 POLRMTO00411 1230 aaKnown RBP15.99■□□□□ 0.15
ASIC3-208ENST00000490540 DCTN1Q14203 1278 aa15.99■□□□□ 0.15
ASIC3-208ENST00000490540 KLRG1Q96E93 195 aa15.99■□□□□ 0.15
ASIC3-208ENST00000490540 SIPA1L3O60292 1781 aaPredicted RBP15.99■□□□□ 0.15
ASIC3-208ENST00000490540 BTBD11A6QL63 1104 aa15.98■□□□□ 0.15
ASIC3-208ENST00000490540 ZPR1O75312 459 aa15.98■□□□□ 0.15
ASIC3-208ENST00000490540 FSTL1Q12841 308 aa15.98■□□□□ 0.15
ASIC3-208ENST00000490540 TM4SF1P30408 202 aa15.97■□□□□ 0.15
ASIC3-208ENST00000490540 RASSF7Q02833 373 aa15.97■□□□□ 0.15
ASIC3-208ENST00000490540 RTF1Q92541 710 aaKnown RBP15.97■□□□□ 0.15
ASIC3-208ENST00000490540 BCL2L12Q9HB09 334 aa15.97■□□□□ 0.15
ASIC3-208ENST00000490540 BRCA1P38398 1863 aaKnown RBP15.97■□□□□ 0.15
ASIC3-208ENST00000490540 STARD3NLO95772 234 aa15.96■□□□□ 0.15
ASIC3-208ENST00000490540 DDX10Q13206 875 aaKnown RBP15.96■□□□□ 0.15
ASIC3-208ENST00000490540 FMNL2Q96PY5 1086 aa15.96■□□□□ 0.15
ASIC3-208ENST00000490540 NARFQ9UHQ1 456 aa15.96■□□□□ 0.15
ASIC3-208ENST00000490540 ZNF330Q9Y3S2 320 aaPredicted RBP15.96■□□□□ 0.15
ASIC3-208ENST00000490540 WDR90Q96KV7 1748 aa15.96■□□□□ 0.15
ASIC3-208ENST00000490540 PRAMEF22A3QJZ6 481 aa15.95■□□□□ 0.14
ASIC3-208ENST00000490540 NFIXQ14938 502 aa15.95■□□□□ 0.14
ASIC3-208ENST00000490540 COL13A1Q5TAT6 717 aaPredicted RBP15.95■□□□□ 0.14
ASIC3-208ENST00000490540 A1BGP04217 495 aa15.94■□□□□ 0.14
ASIC3-208ENST00000490540 EIF5P55010 431 aaKnown RBP15.94■□□□□ 0.14
ASIC3-208ENST00000490540 ARFGEF1Q9Y6D6 1849 aa15.94■□□□□ 0.14
ASIC3-208ENST00000490540 CAPN15O75808 1086 aa15.93■□□□□ 0.14
ASIC3-208ENST00000490540 PIP4K2AP48426 406 aaPredicted RBP15.93■□□□□ 0.14
ASIC3-208ENST00000490540 BICDL1Q6ZP65 573 aa15.93■□□□□ 0.14
ASIC3-208ENST00000490540 JMYQ8N9B5 988 aa15.93■□□□□ 0.14
ASIC3-208ENST00000490540 SMC1BQ8NDV3 1235 aa15.93■□□□□ 0.14
ASIC3-208ENST00000490540 PLEKHF1Q96S99 279 aa15.92■□□□□ 0.14
ASIC3-208ENST00000490540 TEX13AQ9BXU3 409 aaPredicted RBP15.92■□□□□ 0.14
ASIC3-208ENST00000490540 MIS18AQ9NYP9 233 aa15.92■□□□□ 0.14
ASIC3-208ENST00000490540 TBC1D2BQ9UPU7 963 aa15.92■□□□□ 0.14
ASIC3-208ENST00000490540 USP16Q9Y5T5 823 aa15.92■□□□□ 0.14
ASIC3-208ENST00000490540 PRELPP51888 382 aa15.91■□□□□ 0.14
ASIC3-208ENST00000490540 THUMPD2Q9BTF0 503 aaKnown RBP15.91■□□□□ 0.14
ASIC3-208ENST00000490540 CARMIL3Q8ND23 1372 aa15.9■□□□□ 0.14
ASIC3-208ENST00000490540 A0A087WZG4 1122 aa15.9■□□□□ 0.14
ASIC3-208ENST00000490540 HTATSF1O43719 755 aaKnown RBP15.9■□□□□ 0.14
ASIC3-208ENST00000490540 SERPINB2P05120 415 aa15.9■□□□□ 0.14
ASIC3-208ENST00000490540 NEFMP07197 916 aa15.9■□□□□ 0.14
ASIC3-208ENST00000490540 LMNB1P20700 586 aa15.9■□□□□ 0.14
ASIC3-208ENST00000490540 TBC1D9BQ66K14 1250 aa15.9■□□□□ 0.14
ASIC3-208ENST00000490540 C2CD5Q86YS7 1000 aa15.9■□□□□ 0.14
ASIC3-208ENST00000490540 SCN7AQ01118 1682 aa15.89■□□□□ 0.13
ASIC3-208ENST00000490540 IL6STP40189 918 aaPredicted RBP15.89■□□□□ 0.13
ASIC3-208ENST00000490540 RALBP1Q15311 655 aa15.89■□□□□ 0.13
ASIC3-208ENST00000490540 NFE2L2Q16236 605 aa15.89■□□□□ 0.13
ASIC3-208ENST00000490540 TTLL6Q8N841 843 aa15.89■□□□□ 0.13
ASIC3-208ENST00000490540 GLTPD2A6NH11 291 aa15.88■□□□□ 0.13
ASIC3-208ENST00000490540 VEGFAP15692 232 aaPredicted RBP15.88■□□□□ 0.13
ASIC3-208ENST00000490540 TAF7Q15545 349 aaPredicted RBP15.88■□□□□ 0.13
ASIC3-208ENST00000490540 CCDC24Q8N4L8 307 aa15.88■□□□□ 0.13
ASIC3-208ENST00000490540 MAPK8IP3Q9UPT6 1336 aa15.88■□□□□ 0.13
ASIC3-208ENST00000490540 ZC3H4Q9UPT8 1303 aaKnown RBP15.88■□□□□ 0.13
ASIC3-208ENST00000490540 TNRC6CQ9HCJ0 1690 aaKnown RBP15.87■□□□□ 0.13
ASIC3-208ENST00000490540 H0YIN7 160 aa15.87■□□□□ 0.13
ASIC3-208ENST00000490540 CAMTA2O94983 1202 aa15.87■□□□□ 0.13
ASIC3-208ENST00000490540 SNRPA1P09661 255 aaKnown RBP15.87■□□□□ 0.13
ASIC3-208ENST00000490540 TNS4Q8IZW8 715 aa15.87■□□□□ 0.13
ASIC3-208ENST00000490540 ZNF219Q9P2Y4 722 aaPredicted RBP15.87■□□□□ 0.13
ASIC3-208ENST00000490540 NRXN2Q9P2S2 1712 aa15.86■□□□□ 0.13
ASIC3-208ENST00000490540 DZIP3Q86Y13 1208 aaKnown RBP15.86■□□□□ 0.13
ASIC3-208ENST00000490540 MYBBP1AQ9BQG0 1328 aaKnown RBP15.86■□□□□ 0.13
ASIC3-208ENST00000490540 NBPF26B4DH59 902 aa15.85■□□□□ 0.13
ASIC3-208ENST00000490540 NFKBIEO00221 500 aa15.85■□□□□ 0.13
ASIC3-208ENST00000490540 NBPF10Q6P3W6 841 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms