RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 TEFQ10587 303 aa15.1■□□□□ 0.01
DUBR-204ENST00000490441 ZNF526Q8TF50 670 aaPredicted RBP15.1■□□□□ 0.01
DUBR-204ENST00000490441 ADCY9O60503 1353 aa15.1■□□□□ 0.01
DUBR-204ENST00000490441 N4BP2Q86UW6 1770 aaPredicted RBP15.09■□□□□ 0.01
DUBR-204ENST00000490441 GNAT3A8MTJ3 354 aa15.09■□□□□ 0.01
DUBR-204ENST00000490441 FCHSD2O94868 740 aa15.09■□□□□ 0.01
DUBR-204ENST00000490441 CYP19A1P11511 503 aaPredicted RBP15.09■□□□□ 0.01
DUBR-204ENST00000490441 VSIG10Q8N0Z9 540 aa15.09■□□□□ 0.01
DUBR-204ENST00000490441 SOS1Q07889 1333 aaPredicted RBP15.09■□□□□ 0.01
DUBR-204ENST00000490441 KCPQ6ZWJ8 1503 aa15.08■□□□□ 0.01
DUBR-204ENST00000490441 USPL1Q5W0Q7 1092 aa15.08■□□□□ 0
DUBR-204ENST00000490441 NUDCQ9Y266 331 aa15.08■□□□□ 0
DUBR-204ENST00000490441 ADAMTS7Q9UKP4 1686 aa15.08■□□□□ 0
DUBR-204ENST00000490441 STARD3NLO95772 234 aa15.07■□□□□ 0
DUBR-204ENST00000490441 DDR1Q08345 913 aa15.07■□□□□ 0
DUBR-204ENST00000490441 ARHGAP27Q6ZUM4 889 aa15.07■□□□□ 0
DUBR-204ENST00000490441 ZBTB1Q9Y2K1 713 aa15.07■□□□□ 0
DUBR-204ENST00000490441 COL15A1P39059 1388 aa15.07■□□□□ 0
DUBR-204ENST00000490441 KIAA1551Q9HCM1 1747 aa15.06■□□□□ 0
DUBR-204ENST00000490441 PRKAR2BP31323 418 aa15.06■□□□□ 0
DUBR-204ENST00000490441 PIM2Q9P1W9 311 aa15.06■□□□□ 0
DUBR-204ENST00000490441 NARFQ9UHQ1 456 aa15.06■□□□□ 0
DUBR-204ENST00000490441 POLRMTO00411 1230 aaKnown RBP15.05■□□□□ -0
DUBR-204ENST00000490441 CANXP27824 592 aaKnown RBP15.05■□□□□ -0
DUBR-204ENST00000490441 DALRD3Q5D0E6 543 aaKnown RBP15.05■□□□□ -0
DUBR-204ENST00000490441 IL17REQ8NFR9 667 aa15.05■□□□□ -0
DUBR-204ENST00000490441 A0A087WZG4 1122 aa15.04■□□□□ -0
DUBR-204ENST00000490441 TM4SF1P30408 202 aa15.04■□□□□ -0
DUBR-204ENST00000490441 ZNF790Q6PG37 636 aa15.04■□□□□ -0
DUBR-204ENST00000490441 TEX13AQ9BXU3 409 aaPredicted RBP15.04■□□□□ -0
DUBR-204ENST00000490441 UBR2Q8IWV8 1755 aa15.03■□□□□ -0
DUBR-204ENST00000490441 U2AF1L5P0DN76 240 aaPredicted RBP15.03■□□□□ -0
DUBR-204ENST00000490441 PPP2R1AP30153 589 aa15.03■□□□□ -0
DUBR-204ENST00000490441 U2AF1Q01081 240 aaKnown RBP eCLIP15.03■□□□□ -0
DUBR-204ENST00000490441 NFIXQ14938 502 aa15.03■□□□□ -0
DUBR-204ENST00000490441 NPM2Q86SE8 214 aaKnown RBP15.03■□□□□ -0
DUBR-204ENST00000490441 ZNF496Q96IT1 587 aaPredicted RBP15.03■□□□□ -0
DUBR-204ENST00000490441 RSPH6AQ9H0K4 717 aa15.03■□□□□ -0
DUBR-204ENST00000490441 HEG1Q9ULI3 1381 aa15.02■□□□□ -0
DUBR-204ENST00000490441 BRCA1P38398 1863 aaKnown RBP15.02■□□□□ -0
DUBR-204ENST00000490441 KCNA3P22001 575 aa15.02■□□□□ -0
DUBR-204ENST00000490441 CHRNA5P30532 468 aa15.02■□□□□ -0
DUBR-204ENST00000490441 RTF1Q92541 710 aaKnown RBP15.02■□□□□ -0
DUBR-204ENST00000490441 FMNL2Q96PY5 1086 aa15.02■□□□□ -0
DUBR-204ENST00000490441 ZNF330Q9Y3S2 320 aaPredicted RBP15.02■□□□□ -0
DUBR-204ENST00000490441 BTBD11A6QL63 1104 aa15.01□□□□□ -0.01
DUBR-204ENST00000490441 PHACTR3Q96KR7 559 aa15.01□□□□□ -0.01
DUBR-204ENST00000490441 RNF39Q9H2S5 420 aa15.01□□□□□ -0.01
DUBR-204ENST00000490441 ARFGEF1Q9Y6D6 1849 aa15.01□□□□□ -0.01
DUBR-204ENST00000490441 CEMIPQ8WUJ3 1361 aa15□□□□□ -0.01
DUBR-204ENST00000490441 SERPINB2P05120 415 aa15□□□□□ -0.01
DUBR-204ENST00000490441 EIF5P55010 431 aaKnown RBP15□□□□□ -0.01
DUBR-204ENST00000490441 BICDL1Q6ZP65 573 aa15□□□□□ -0.01
DUBR-204ENST00000490441 SIPA1L3O60292 1781 aaPredicted RBP14.99□□□□□ -0.01
DUBR-204ENST00000490441 NEFMP07197 916 aa14.99□□□□□ -0.01
DUBR-204ENST00000490441 C9orf131Q5VYM1 1079 aa14.99□□□□□ -0.01
DUBR-204ENST00000490441 BCL2L12Q9HB09 334 aa14.99□□□□□ -0.01
DUBR-204ENST00000490441 IL6STP40189 918 aaPredicted RBP14.98□□□□□ -0.01
DUBR-204ENST00000490441 AFDNP55196 1824 aaKnown RBP14.97□□□□□ -0.01
DUBR-204ENST00000490441 KIF3CO14782 793 aa14.97□□□□□ -0.01
DUBR-204ENST00000490441 TBC1D2BQ9UPU7 963 aa14.97□□□□□ -0.01
DUBR-204ENST00000490441 NPHP1O15259 732 aa14.96□□□□□ -0.01
DUBR-204ENST00000490441 HSPA6P17066 643 aa14.96□□□□□ -0.01
DUBR-204ENST00000490441 MCM10Q7L590 875 aa14.96□□□□□ -0.01
DUBR-204ENST00000490441 RNF181Q9P0P0 153 aa14.96□□□□□ -0.01
DUBR-204ENST00000490441 NRXN2Q9P2S2 1712 aa14.95□□□□□ -0.02
DUBR-204ENST00000490441 H0YIN7 160 aa14.95□□□□□ -0.02
DUBR-204ENST00000490441 KCNQ3O43525 872 aa14.95□□□□□ -0.02
DUBR-204ENST00000490441 HTATSF1O43719 755 aaKnown RBP14.95□□□□□ -0.02
DUBR-204ENST00000490441 A1BGP04217 495 aa14.95□□□□□ -0.02
DUBR-204ENST00000490441 TBC1D9BQ66K14 1250 aa14.95□□□□□ -0.02
DUBR-204ENST00000490441 C2CD5Q86YS7 1000 aa14.95□□□□□ -0.02
DUBR-204ENST00000490441 TTLL6Q8N841 843 aa14.95□□□□□ -0.02
DUBR-204ENST00000490441 SCN7AQ01118 1682 aa14.94□□□□□ -0.02
DUBR-204ENST00000490441 SNRPA1P09661 255 aaKnown RBP14.94□□□□□ -0.02
DUBR-204ENST00000490441 CARMIL3Q8ND23 1372 aa14.94□□□□□ -0.02
DUBR-204ENST00000490441 KDM2BQ8NHM5 1336 aa14.93□□□□□ -0.02
DUBR-204ENST00000490441 TOMM70O94826 608 aa14.93□□□□□ -0.02
DUBR-204ENST00000490441 PDE6BP35913 854 aa14.93□□□□□ -0.02
DUBR-204ENST00000490441 DCTN1Q14203 1278 aa14.93□□□□□ -0.02
DUBR-204ENST00000490441 DZIP3Q86Y13 1208 aaKnown RBP14.93□□□□□ -0.02
DUBR-204ENST00000490441 C16orf71Q8IYS4 520 aaPredicted RBP14.93□□□□□ -0.02
DUBR-204ENST00000490441 SETDB2Q96T68 719 aa14.93□□□□□ -0.02
DUBR-204ENST00000490441 NMRK2Q9NPI5 230 aa14.93□□□□□ -0.02
DUBR-204ENST00000490441 PDZRN3Q9UPQ7 1066 aa14.93□□□□□ -0.02
DUBR-204ENST00000490441 CNBD1Q8NA66 436 aa14.92□□□□□ -0.02
DUBR-204ENST00000490441 SPINK5Q9NQ38 1064 aaPredicted RBP14.92□□□□□ -0.02
DUBR-204ENST00000490441 USP16Q9Y5T5 823 aa14.92□□□□□ -0.02
DUBR-204ENST00000490441 DLEC1Q9Y238 1755 aa14.91□□□□□ -0.02
DUBR-204ENST00000490441 CAMTA2O94983 1202 aa14.91□□□□□ -0.02
DUBR-204ENST00000490441 ST5P78524 1137 aa14.91□□□□□ -0.02
DUBR-204ENST00000490441 RASSF7Q02833 373 aa14.91□□□□□ -0.02
DUBR-204ENST00000490441 TAF7Q15545 349 aaPredicted RBP14.91□□□□□ -0.02
DUBR-204ENST00000490441 PRR5LQ6MZQ0 368 aa14.91□□□□□ -0.02
DUBR-204ENST00000490441 ZNF622Q969S3 477 aaKnown RBP eCLIP14.91□□□□□ -0.02
DUBR-204ENST00000490441 BRIP1Q9BX63 1249 aa14.91□□□□□ -0.02
DUBR-204ENST00000490441 ZNF652Q9Y2D9 606 aa14.91□□□□□ -0.02
DUBR-204ENST00000490441 CEP350Q5VT06 3117 aa14.91□□□□□ -0.02
DUBR-204ENST00000490441 LMNB1P20700 586 aa14.9□□□□□ -0.02
DUBR-204ENST00000490441 PIP4K2AP48426 406 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms