RNA–Protein interactions for RNA: ENST00000489935.1

KCNC4-207, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 1,955 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-207ENST00000489935 DEKP35659 375 aaKnown RBP32.74■■■□□ 2.83
KCNC4-207ENST00000489935 PDE1AP54750 535 aa32.74■■■□□ 2.83
KCNC4-207ENST00000489935 SSH3Q8TE77 659 aa32.74■■■□□ 2.83
KCNC4-207ENST00000489935 SOS2Q07890 1332 aaPredicted RBP32.73■■■□□ 2.83
KCNC4-207ENST00000489935 SALL3Q9BXA9 1300 aa32.73■■■□□ 2.83
KCNC4-207ENST00000489935 CYP27B1O15528 508 aa32.72■■■□□ 2.83
KCNC4-207ENST00000489935 PKD1L3Q7Z443 1732 aa32.71■■■□□ 2.83
KCNC4-207ENST00000489935 PPP1R42Q7Z4L9 355 aa32.71■■■□□ 2.83
KCNC4-207ENST00000489935 MAP3K2Q9Y2U5 619 aa32.71■■■□□ 2.83
KCNC4-207ENST00000489935 HYPKQ9NX55 129 aa32.7■■■□□ 2.82
KCNC4-207ENST00000489935 POLA2Q14181 598 aa32.69■■■□□ 2.82
KCNC4-207ENST00000489935 PDIA6Q15084 440 aa32.69■■■□□ 2.82
KCNC4-207ENST00000489935 KSR2Q6VAB6 950 aa32.69■■■□□ 2.82
KCNC4-207ENST00000489935 PLEKHG2Q9H7P9 1386 aa32.69■■■□□ 2.82
KCNC4-207ENST00000489935 C5P01031 1676 aa32.69■■■□□ 2.82
KCNC4-207ENST00000489935 FRAT2O75474 233 aaPredicted RBP32.69■■■□□ 2.82
KCNC4-207ENST00000489935 SPRYD3Q8NCJ5 442 aa32.69■■■□□ 2.82
KCNC4-207ENST00000489935 DDX21Q9NR30 783 aaKnown RBP eCLIP32.68■■■□□ 2.82
KCNC4-207ENST00000489935 DCAF5Q96JK2 942 aa32.67■■■□□ 2.82
KCNC4-207ENST00000489935 SNX21Q969T3 373 aa32.67■■■□□ 2.82
KCNC4-207ENST00000489935 HSCBQ8IWL3 235 aa32.66■■■□□ 2.82
KCNC4-207ENST00000489935 PRDM11Q9NQV5 511 aa32.66■■■□□ 2.82
KCNC4-207ENST00000489935 TSHZ3Q63HK5 1081 aa32.65■■■□□ 2.82
KCNC4-207ENST00000489935 TUBGCP6Q96RT7 1819 aa32.65■■■□□ 2.82
KCNC4-207ENST00000489935 MRC1P22897 1456 aa32.65■■■□□ 2.82
KCNC4-207ENST00000489935 SRGAP3O43295 1099 aa32.63■■■□□ 2.81
KCNC4-207ENST00000489935 ALDH1L1O75891 902 aa32.63■■■□□ 2.81
KCNC4-207ENST00000489935 ZNF496Q96IT1 587 aaPredicted RBP32.63■■■□□ 2.81
KCNC4-207ENST00000489935 EIF5BO60841 1220 aaKnown RBP32.63■■■□□ 2.81
KCNC4-207ENST00000489935 MX1P20591 662 aa32.63■■■□□ 2.81
KCNC4-207ENST00000489935 USP26Q9BXU7 913 aa32.62■■■□□ 2.81
KCNC4-207ENST00000489935 WDR17Q8IZU2 1322 aa32.62■■■□□ 2.81
KCNC4-207ENST00000489935 SURF6O75683 361 aaKnown RBP32.61■■■□□ 2.81
KCNC4-207ENST00000489935 AIMP1Q12904 312 aaKnown RBP32.61■■■□□ 2.81
KCNC4-207ENST00000489935 CWF19L2Q2TBE0 894 aaKnown RBP32.61■■■□□ 2.81
KCNC4-207ENST00000489935 STAP2Q9UGK3 403 aa32.61■■■□□ 2.81
KCNC4-207ENST00000489935 RAB11FIP3O75154 756 aa32.6■■■□□ 2.81
KCNC4-207ENST00000489935 RBM42Q9BTD8 480 aaKnown RBP32.6■■■□□ 2.81
KCNC4-207ENST00000489935 HSP90AB1P08238 724 aaKnown RBP32.59■■■□□ 2.81
KCNC4-207ENST00000489935 CASC1Q6TDU7 716 aa32.59■■■□□ 2.81
KCNC4-207ENST00000489935 IL1RAPL2Q9NP60 686 aa32.59■■■□□ 2.81
KCNC4-207ENST00000489935 TOM1L2Q6ZVM7 507 aa32.59■■■□□ 2.81
KCNC4-207ENST00000489935 C9orf78Q9NZ63 289 aaPredicted RBP32.58■■■□□ 2.81
KCNC4-207ENST00000489935 ABCA3Q99758 1704 aa32.58■■■□□ 2.81
KCNC4-207ENST00000489935 DDX58O95786 925 aaKnown RBP32.57■■■□□ 2.8
KCNC4-207ENST00000489935 USP16Q9Y5T5 823 aa32.57■■■□□ 2.8
KCNC4-207ENST00000489935 COL5A2P05997 1499 aaPredicted RBP32.57■■■□□ 2.8
KCNC4-207ENST00000489935 CD2BP2O95400 341 aaKnown RBP32.56■■■□□ 2.8
KCNC4-207ENST00000489935 MYL6BP14649 208 aa32.56■■■□□ 2.8
KCNC4-207ENST00000489935 CABP4P57796 275 aa32.56■■■□□ 2.8
KCNC4-207ENST00000489935 TTC5Q8N0Z6 440 aa32.56■■■□□ 2.8
KCNC4-207ENST00000489935 LINS1Q8NG48 757 aa32.56■■■□□ 2.8
KCNC4-207ENST00000489935 RHPN1Q8TCX5 695 aa32.56■■■□□ 2.8
KCNC4-207ENST00000489935 PARP4Q9UKK3 1724 aaKnown RBP32.56■■■□□ 2.8
KCNC4-207ENST00000489935 SNRPA1P09661 255 aaKnown RBP32.55■■■□□ 2.8
KCNC4-207ENST00000489935 MTX1Q13505 466 aa32.55■■■□□ 2.8
KCNC4-207ENST00000489935 NUTM1Q86Y26 1132 aa32.53■■■□□ 2.8
KCNC4-207ENST00000489935 ZCRB1Q8TBF4 217 aaKnown RBP32.53■■■□□ 2.8
KCNC4-207ENST00000489935 FMNL2Q96PY5 1086 aa32.53■■■□□ 2.8
KCNC4-207ENST00000489935 XAGE3Q8WTP9 111 aa32.52■■■□□ 2.8
KCNC4-207ENST00000489935 LRP10Q7Z4F1 713 aa32.52■■■□□ 2.8
KCNC4-207ENST00000489935 RIC3Q7Z5B4 369 aa32.52■■■□□ 2.8
KCNC4-207ENST00000489935 KIF1BPQ96EK5 621 aa32.52■■■□□ 2.8
KCNC4-207ENST00000489935 ERC2O15083 957 aa32.51■■■□□ 2.8
KCNC4-207ENST00000489935 IGKV5-2P06315 115 aa32.51■■■□□ 2.8
KCNC4-207ENST00000489935 COPS6Q7L5N1 327 aa32.51■■■□□ 2.8
KCNC4-207ENST00000489935 UTYO14607 1347 aa32.51■■■□□ 2.79
KCNC4-207ENST00000489935 GRM8O00222 908 aa32.5■■■□□ 2.79
KCNC4-207ENST00000489935 AOX1Q06278 1338 aa32.5■■■□□ 2.79
KCNC4-207ENST00000489935 NHSL1Q5SYE7 1610 aa32.5■■■□□ 2.79
KCNC4-207ENST00000489935 PCDH11XQ9BZA7 1347 aa32.5■■■□□ 2.79
KCNC4-207ENST00000489935 PCDH11YQ9BZA8 1340 aa32.5■■■□□ 2.79
KCNC4-207ENST00000489935 LARP1Q6PKG0 1096 aaKnown RBP32.49■■■□□ 2.79
KCNC4-207ENST00000489935 KAZALD1Q96I82 304 aa32.49■■■□□ 2.79
KCNC4-207ENST00000489935 CHMP5Q9NZZ3 219 aa32.49■■■□□ 2.79
KCNC4-207ENST00000489935 REC8O95072 547 aa32.49■■■□□ 2.79
KCNC4-207ENST00000489935 PIP4K2AP48426 406 aaPredicted RBP32.49■■■□□ 2.79
KCNC4-207ENST00000489935 UNC5CLQ8IV45 518 aa32.49■■■□□ 2.79
KCNC4-207ENST00000489935 RILPL2Q969X0 211 aa32.49■■■□□ 2.79
KCNC4-207ENST00000489935 CARD10Q9BWT7 1032 aa32.49■■■□□ 2.79
KCNC4-207ENST00000489935 TRIM6-TRIM34B2RNG4 842 aa32.48■■■□□ 2.79
KCNC4-207ENST00000489935 DDIT3P35638 169 aa32.48■■■□□ 2.79
KCNC4-207ENST00000489935 SUCLG2Q96I99 432 aa32.48■■■□□ 2.79
KCNC4-207ENST00000489935 HSP90AB4PQ58FF6 505 aa32.47■■■□□ 2.79
KCNC4-207ENST00000489935 HDAC5Q9UQL6 1122 aa32.47■■■□□ 2.79
KCNC4-207ENST00000489935 GLI3P10071 1580 aa32.47■■■□□ 2.79
KCNC4-207ENST00000489935 RABEP1Q15276 862 aa32.46■■■□□ 2.79
KCNC4-207ENST00000489935 STRN4Q9NRL3 753 aa32.46■■■□□ 2.79
KCNC4-207ENST00000489935 IL2RBP14784 551 aa32.45■■■□□ 2.79
KCNC4-207ENST00000489935 CHMLP26374 656 aa32.45■■■□□ 2.79
KCNC4-207ENST00000489935 K7ELQ4 463 aaPredicted RBP32.45■■■□□ 2.78
KCNC4-207ENST00000489935 PI4K2BQ8TCG2 481 aa32.45■■■□□ 2.78
KCNC4-207ENST00000489935 ESYT1Q9BSJ8 1104 aa32.45■■■□□ 2.78
KCNC4-207ENST00000489935 METTL22Q9BUU2 404 aaPredicted RBP32.45■■■□□ 2.78
KCNC4-207ENST00000489935 NEURL1BA8MQ27 555 aa32.44■■■□□ 2.78
KCNC4-207ENST00000489935 ANKRD13DQ6ZTN6 518 aa32.44■■■□□ 2.78
KCNC4-207ENST00000489935 PA2G4Q9UQ80 394 aaKnown RBP32.43■■■□□ 2.78
KCNC4-207ENST00000489935 SHANK3Q9BYB0 1731 aa32.43■■■□□ 2.78
KCNC4-207ENST00000489935 NEXNQ0ZGT2 675 aa32.43■■■□□ 2.78
KCNC4-207ENST00000489935 MYD88Q99836 296 aa32.43■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms