RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 ZBTB1Q9Y2K1 713 aa21.5■■□□□ 1.03
PLOD3-216ENST00000489927 COL15A1P39059 1388 aa21.49■■□□□ 1.03
PLOD3-216ENST00000489927 IFFO2Q5TF58 517 aa21.49■■□□□ 1.03
PLOD3-216ENST00000489927 NARFQ9UHQ1 456 aa21.49■■□□□ 1.03
PLOD3-216ENST00000489927 NFIXQ14938 502 aa21.48■■□□□ 1.03
PLOD3-216ENST00000489927 VIRMAQ69YN4 1812 aaKnown RBP21.48■■□□□ 1.03
PLOD3-216ENST00000489927 VSIG10Q8N0Z9 540 aa21.47■■□□□ 1.03
PLOD3-216ENST00000489927 APLP1P51693 650 aa21.46■■□□□ 1.03
PLOD3-216ENST00000489927 BCL2L12Q9HB09 334 aa21.46■■□□□ 1.03
PLOD3-216ENST00000489927 RNF181Q9P0P0 153 aa21.46■■□□□ 1.03
PLOD3-216ENST00000489927 COL3A1P02461 1466 aaPredicted RBP21.45■■□□□ 1.02
PLOD3-216ENST00000489927 UBR2Q8IWV8 1755 aa21.44■■□□□ 1.02
PLOD3-216ENST00000489927 CANXP27824 592 aaKnown RBP21.44■■□□□ 1.02
PLOD3-216ENST00000489927 SERPINB2P05120 415 aa21.43■■□□□ 1.02
PLOD3-216ENST00000489927 CNGB1Q14028 1251 aaPredicted RBP21.43■■□□□ 1.02
PLOD3-216ENST00000489927 TTC5Q8N0Z6 440 aa21.43■■□□□ 1.02
PLOD3-216ENST00000489927 AFDNP55196 1824 aaKnown RBP21.43■■□□□ 1.02
PLOD3-216ENST00000489927 U2SURPO15042 1029 aaKnown RBP21.42■■□□□ 1.02
PLOD3-216ENST00000489927 NRXN2Q9P2S2 1712 aa21.42■■□□□ 1.02
PLOD3-216ENST00000489927 NPC1L1Q9UHC9 1359 aa21.41■■□□□ 1.02
PLOD3-216ENST00000489927 KDM2BQ8NHM5 1336 aa21.41■■□□□ 1.02
PLOD3-216ENST00000489927 STARD3NLO95772 234 aa21.41■■□□□ 1.02
PLOD3-216ENST00000489927 IL17REQ8NFR9 667 aa21.41■■□□□ 1.02
PLOD3-216ENST00000489927 RBM46Q8TBY0 533 aaKnown RBP21.41■■□□□ 1.02
PLOD3-216ENST00000489927 EIF5P55010 431 aaKnown RBP21.4■■□□□ 1.02
PLOD3-216ENST00000489927 C16orf71Q8IYS4 520 aaPredicted RBP21.4■■□□□ 1.02
PLOD3-216ENST00000489927 DNAJC5GQ8N7S2 189 aa21.4■■□□□ 1.02
PLOD3-216ENST00000489927 ZNF496Q96IT1 587 aaPredicted RBP21.4■■□□□ 1.02
PLOD3-216ENST00000489927 GNAT3A8MTJ3 354 aa21.39■■□□□ 1.01
PLOD3-216ENST00000489927 RASSF7Q02833 373 aa21.39■■□□□ 1.01
PLOD3-216ENST00000489927 TEFQ10587 303 aa21.39■■□□□ 1.01
PLOD3-216ENST00000489927 ZNF790Q6PG37 636 aa21.39■■□□□ 1.01
PLOD3-216ENST00000489927 BICDL1Q6ZP65 573 aa21.39■■□□□ 1.01
PLOD3-216ENST00000489927 CARMIL3Q8ND23 1372 aa21.38■■□□□ 1.01
PLOD3-216ENST00000489927 GAS2L2Q8NHY3 880 aa21.38■■□□□ 1.01
PLOD3-216ENST00000489927 RRAGCQ9HB90 399 aa21.38■■□□□ 1.01
PLOD3-216ENST00000489927 HEG1Q9ULI3 1381 aa21.37■■□□□ 1.01
PLOD3-216ENST00000489927 SBF1O95248 1867 aa21.37■■□□□ 1.01
PLOD3-216ENST00000489927 C2CD5Q86YS7 1000 aa21.37■■□□□ 1.01
PLOD3-216ENST00000489927 TTLL6Q8N841 843 aa21.37■■□□□ 1.01
PLOD3-216ENST00000489927 DLEC1Q9Y238 1755 aa21.37■■□□□ 1.01
PLOD3-216ENST00000489927 A0A087WZG4 1122 aa21.36■■□□□ 1.01
PLOD3-216ENST00000489927 PRELPP51888 382 aa21.36■■□□□ 1.01
PLOD3-216ENST00000489927 H0YIN7 160 aa21.35■■□□□ 1.01
PLOD3-216ENST00000489927 LMNB1P20700 586 aa21.35■■□□□ 1.01
PLOD3-216ENST00000489927 FSTL1Q12841 308 aa21.35■■□□□ 1.01
PLOD3-216ENST00000489927 TBC1D9BQ66K14 1250 aa21.35■■□□□ 1.01
PLOD3-216ENST00000489927 TEX13AQ9BXU3 409 aaPredicted RBP21.35■■□□□ 1.01
PLOD3-216ENST00000489927 ZNF330Q9Y3S2 320 aaPredicted RBP21.35■■□□□ 1.01
PLOD3-216ENST00000489927 SIPA1L3O60292 1781 aaPredicted RBP21.35■■□□□ 1.01
PLOD3-216ENST00000489927 TNRC6CQ9HCJ0 1690 aaKnown RBP21.34■■□□□ 1.01
PLOD3-216ENST00000489927 ZC3H4Q9UPT8 1303 aaKnown RBP21.34■■□□□ 1.01
PLOD3-216ENST00000489927 TBC1D2BQ9UPU7 963 aa21.34■■□□□ 1.01
PLOD3-216ENST00000489927 WDR90Q96KV7 1748 aa21.34■■□□□ 1.01
PLOD3-216ENST00000489927 HTRA3P83110 453 aa21.33■■□□□ 1.01
PLOD3-216ENST00000489927 PHACTR3Q96KR7 559 aa21.33■■□□□ 1.01
PLOD3-216ENST00000489927 FMNL2Q96PY5 1086 aa21.33■■□□□ 1.01
PLOD3-216ENST00000489927 CEMIPQ8WUJ3 1361 aa21.33■■□□□ 1
PLOD3-216ENST00000489927 SCN7AQ01118 1682 aa21.32■■□□□ 1
PLOD3-216ENST00000489927 IL6STP40189 918 aaPredicted RBP21.32■■□□□ 1
PLOD3-216ENST00000489927 NFKBIEO00221 500 aa21.31■■□□□ 1
PLOD3-216ENST00000489927 A1BGP04217 495 aa21.31■■□□□ 1
PLOD3-216ENST00000489927 PRKAR2BP31323 418 aa21.31■■□□□ 1
PLOD3-216ENST00000489927 RSPH6AQ9H0K4 717 aa21.31■■□□□ 1
PLOD3-216ENST00000489927 BTBD11A6QL63 1104 aa21.3■■□□□ 1
PLOD3-216ENST00000489927 KCNQ3O43525 872 aa21.3■■□□□ 1
PLOD3-216ENST00000489927 PRR5LQ6MZQ0 368 aa21.3■■□□□ 1
PLOD3-216ENST00000489927 CCDC24Q8N4L8 307 aa21.3■■□□□ 1
PLOD3-216ENST00000489927 BRIP1Q9BX63 1249 aa21.3■■□□□ 1
PLOD3-216ENST00000489927 ANKRD31Q8N7Z5 1873 aa21.29■■□□□ 1
PLOD3-216ENST00000489927 GLTPD2A6NH11 291 aa21.29■■□□□ 1
PLOD3-216ENST00000489927 PDE6BP35913 854 aa21.28■■□□□ 1
PLOD3-216ENST00000489927 SMC1BQ8NDV3 1235 aa21.28■■□□□ 1
PLOD3-216ENST00000489927 ZNF622Q969S3 477 aaKnown RBP eCLIP21.28■■□□□ 1
PLOD3-216ENST00000489927 CFAP53Q96M91 514 aa21.28■■□□□ 1
PLOD3-216ENST00000489927 TIAM2Q8IVF5 1701 aa21.27■■□□□ 1
PLOD3-216ENST00000489927 CAMTA2O94983 1202 aa21.27■■□□□ 1
PLOD3-216ENST00000489927 NPM2Q86SE8 214 aaKnown RBP21.27■■□□□ 1
PLOD3-216ENST00000489927 KLRG1Q96E93 195 aa21.27■■□□□ 1
PLOD3-216ENST00000489927 PDZRN3Q9UPQ7 1066 aa21.27■■□□□ 1
PLOD3-216ENST00000489927 COL11A2P13942 1736 aaPredicted RBP21.26■□□□□ 0.99
PLOD3-216ENST00000489927 C21orf2O43822 256 aa21.26■□□□□ 0.99
PLOD3-216ENST00000489927 VEGFAP15692 232 aaPredicted RBP21.26■□□□□ 0.99
PLOD3-216ENST00000489927 SETDB2Q96T68 719 aa21.26■□□□□ 0.99
PLOD3-216ENST00000489927 ZNF219Q9P2Y4 722 aaPredicted RBP21.26■□□□□ 0.99
PLOD3-216ENST00000489927 PIP4K2AP48426 406 aaPredicted RBP21.25■□□□□ 0.99
PLOD3-216ENST00000489927 CNBD1Q8NA66 436 aa21.25■□□□□ 0.99
PLOD3-216ENST00000489927 USP16Q9Y5T5 823 aa21.25■□□□□ 0.99
PLOD3-216ENST00000489927 PRAMEF22A3QJZ6 481 aa21.24■□□□□ 0.99
PLOD3-216ENST00000489927 DZIP3Q86Y13 1208 aaKnown RBP21.24■□□□□ 0.99
PLOD3-216ENST00000489927 NUDCQ9Y266 331 aa21.24■□□□□ 0.99
PLOD3-216ENST00000489927 NPHP1O15259 732 aa21.23■□□□□ 0.99
PLOD3-216ENST00000489927 U2AF1L5P0DN76 240 aaPredicted RBP21.23■□□□□ 0.99
PLOD3-216ENST00000489927 U2AF1Q01081 240 aaKnown RBP eCLIP21.23■□□□□ 0.99
PLOD3-216ENST00000489927 MCM10Q7L590 875 aa21.23■□□□□ 0.99
PLOD3-216ENST00000489927 JMYQ8N9B5 988 aa21.23■□□□□ 0.99
PLOD3-216ENST00000489927 PCNTO95613 3336 aa21.23■□□□□ 0.99
PLOD3-216ENST00000489927 CCDC88AQ3V6T2 1871 aa21.22■□□□□ 0.99
PLOD3-216ENST00000489927 PPP2R1AP30153 589 aa21.22■□□□□ 0.99
PLOD3-216ENST00000489927 BCORQ6W2J9 1755 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms