RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 DZIP1LQ8IYY4 767 aaKnown RBP14.83□□□□□ -0.04
TRIM40-208ENST00000489892 GIGYF1O75420 1035 aaPredicted RBP14.82□□□□□ -0.04
TRIM40-208ENST00000489892 NBPF14Q5TI25 921 aa14.82□□□□□ -0.04
TRIM40-208ENST00000489892 ANP32EQ9BTT0 268 aa14.82□□□□□ -0.04
TRIM40-208ENST00000489892 NOB1Q9ULX3 412 aaKnown RBP14.82□□□□□ -0.04
TRIM40-208ENST00000489892 KRT24Q2M2I5 525 aa14.81□□□□□ -0.04
TRIM40-208ENST00000489892 TEX13AQ9BXU3 409 aaPredicted RBP14.81□□□□□ -0.04
TRIM40-208ENST00000489892 DBF4Q9UBU7 674 aaPredicted RBP14.81□□□□□ -0.04
TRIM40-208ENST00000489892 ERBB4Q15303 1308 aa14.81□□□□□ -0.04
TRIM40-208ENST00000489892 PAPPAQ13219 1627 aa14.81□□□□□ -0.04
TRIM40-208ENST00000489892 SLC34A2O95436 690 aa14.8□□□□□ -0.04
TRIM40-208ENST00000489892 SLC4A2P04920 1241 aa14.8□□□□□ -0.04
TRIM40-208ENST00000489892 TRIM27P14373 513 aa14.8□□□□□ -0.04
TRIM40-208ENST00000489892 VSIG10Q8N0Z9 540 aa14.8□□□□□ -0.04
TRIM40-208ENST00000489892 DDX19BQ9UMR2 479 aa14.8□□□□□ -0.04
TRIM40-208ENST00000489892 BCL9O00512 1426 aa14.8□□□□□ -0.04
TRIM40-208ENST00000489892 UBR2Q8IWV8 1755 aa14.79□□□□□ -0.04
TRIM40-208ENST00000489892 HYPKQ9NX55 129 aa14.79□□□□□ -0.04
TRIM40-208ENST00000489892 TOGARAM1Q9Y4F4 1720 aa14.79□□□□□ -0.04
TRIM40-208ENST00000489892 MVPQ14764 893 aaKnown RBP14.78□□□□□ -0.04
TRIM40-208ENST00000489892 MARCH10Q8NA82 808 aaPredicted RBP14.78□□□□□ -0.04
TRIM40-208ENST00000489892 SMARCC1Q92922 1105 aaPredicted RBP14.78□□□□□ -0.04
TRIM40-208ENST00000489892 ZNF496Q96IT1 587 aaPredicted RBP14.78□□□□□ -0.04
TRIM40-208ENST00000489892 CCDC136Q96JN2 1154 aa14.78□□□□□ -0.04
TRIM40-208ENST00000489892 CRBNQ96SW2 442 aa14.78□□□□□ -0.04
TRIM40-208ENST00000489892 ITGB4P16144 1822 aa14.78□□□□□ -0.04
TRIM40-208ENST00000489892 KCNQ3O43525 872 aa14.77□□□□□ -0.05
TRIM40-208ENST00000489892 DDX58O95786 925 aaKnown RBP14.77□□□□□ -0.05
TRIM40-208ENST00000489892 EIF2S2P20042 333 aaKnown RBP14.77□□□□□ -0.05
TRIM40-208ENST00000489892 SLC39A6Q13433 755 aa14.77□□□□□ -0.05
TRIM40-208ENST00000489892 LAMB4A4D0S4 1761 aa14.77□□□□□ -0.05
TRIM40-208ENST00000489892 RGPD3A6NKT7 1758 aaPredicted RBP14.77□□□□□ -0.05
TRIM40-208ENST00000489892 RGPD4Q7Z3J3 1758 aa14.77□□□□□ -0.05
TRIM40-208ENST00000489892 DOT1LQ8TEK3 1739 aa14.77□□□□□ -0.05
TRIM40-208ENST00000489892 KAT6BQ8WYB5 2073 aa14.77□□□□□ -0.05
TRIM40-208ENST00000489892 SBF2Q86WG5 1849 aa14.76□□□□□ -0.05
TRIM40-208ENST00000489892 ABCC4O15439 1325 aa14.76□□□□□ -0.05
TRIM40-208ENST00000489892 HMGB2P26583 209 aaKnown RBP14.76□□□□□ -0.05
TRIM40-208ENST00000489892 FLIIQ13045 1269 aa14.76□□□□□ -0.05
TRIM40-208ENST00000489892 B4GALNT3Q6L9W6 998 aa14.76□□□□□ -0.05
TRIM40-208ENST00000489892 EXOC6Q8TAG9 804 aa14.76□□□□□ -0.05
TRIM40-208ENST00000489892 PANK1Q8TE04 598 aa14.76□□□□□ -0.05
TRIM40-208ENST00000489892 PIGBQ92521 554 aa14.76□□□□□ -0.05
TRIM40-208ENST00000489892 SYTL4Q96C24 671 aaPredicted RBP14.76□□□□□ -0.05
TRIM40-208ENST00000489892 DDX21Q9NR30 783 aaKnown RBP eCLIP14.76□□□□□ -0.05
TRIM40-208ENST00000489892 PPP1R1BQ9UD71 204 aaPredicted RBP14.76□□□□□ -0.05
TRIM40-208ENST00000489892 PXDNLA1KZ92 1463 aa14.76□□□□□ -0.05
TRIM40-208ENST00000489892 PRIM1P49642 420 aaKnown RBP14.75□□□□□ -0.05
TRIM40-208ENST00000489892 CCT4P50991 539 aaKnown RBP14.75□□□□□ -0.05
TRIM40-208ENST00000489892 FKBP5Q13451 457 aaPredicted RBP14.75□□□□□ -0.05
TRIM40-208ENST00000489892 C20orf194Q5TEA3 1177 aa14.75□□□□□ -0.05
TRIM40-208ENST00000489892 ITPRIPQ8IWB1 547 aa14.75□□□□□ -0.05
TRIM40-208ENST00000489892 CLUAP1Q96AJ1 413 aa14.75□□□□□ -0.05
TRIM40-208ENST00000489892 KCPQ6ZWJ8 1503 aa14.75□□□□□ -0.05
TRIM40-208ENST00000489892 STARD3NLO95772 234 aa14.74□□□□□ -0.05
TRIM40-208ENST00000489892 COG6Q9Y2V7 657 aa14.74□□□□□ -0.05
TRIM40-208ENST00000489892 TCERG1O14776 1098 aaKnown RBP14.73□□□□□ -0.05
TRIM40-208ENST00000489892 INTS3Q68E01 1043 aaKnown RBP14.73□□□□□ -0.05
TRIM40-208ENST00000489892 SPON1Q9HCB6 807 aa14.73□□□□□ -0.05
TRIM40-208ENST00000489892 ATG3Q9NT62 314 aa14.73□□□□□ -0.05
TRIM40-208ENST00000489892 CHPF2Q9P2E5 772 aa14.73□□□□□ -0.05
TRIM40-208ENST00000489892 C5P01031 1676 aa14.71□□□□□ -0.05
TRIM40-208ENST00000489892 PTCD1O75127 700 aaKnown RBP14.71□□□□□ -0.05
TRIM40-208ENST00000489892 RLBP1P12271 317 aa14.71□□□□□ -0.05
TRIM40-208ENST00000489892 TMEM57Q8N5G2 664 aa14.71□□□□□ -0.05
TRIM40-208ENST00000489892 NECTIN2Q92692 538 aa14.71□□□□□ -0.05
TRIM40-208ENST00000489892 ASAP1Q9ULH1 1129 aa14.71□□□□□ -0.05
TRIM40-208ENST00000489892 HDAC5Q9UQL6 1122 aa14.71□□□□□ -0.05
TRIM40-208ENST00000489892 KCNQ2O43526 872 aa14.7□□□□□ -0.06
TRIM40-208ENST00000489892 NHSQ6T4R5 1651 aa14.7□□□□□ -0.06
TRIM40-208ENST00000489892 CHD4Q14839 1912 aa14.7□□□□□ -0.06
TRIM40-208ENST00000489892 ZNF831Q5JPB2 1677 aa14.69□□□□□ -0.06
TRIM40-208ENST00000489892 PLSCR1O15162 318 aa14.69□□□□□ -0.06
TRIM40-208ENST00000489892 NPM2Q86SE8 214 aaKnown RBP14.69□□□□□ -0.06
TRIM40-208ENST00000489892 RBM42Q9BTD8 480 aaKnown RBP14.69□□□□□ -0.06
TRIM40-208ENST00000489892 BCL11BQ9C0K0 894 aaPredicted RBP14.69□□□□□ -0.06
TRIM40-208ENST00000489892 PALLDQ8WX93 1383 aa14.69□□□□□ -0.06
TRIM40-208ENST00000489892 CICQ96RK0 1608 aaPredicted RBP14.69□□□□□ -0.06
TRIM40-208ENST00000489892 IBTKQ9P2D0 1353 aaPredicted RBP14.69□□□□□ -0.06
TRIM40-208ENST00000489892 N4BP2Q86UW6 1770 aaPredicted RBP14.68□□□□□ -0.06
TRIM40-208ENST00000489892 KSR2Q6VAB6 950 aa14.68□□□□□ -0.06
TRIM40-208ENST00000489892 DNAAF4Q8WXU2 420 aa14.68□□□□□ -0.06
TRIM40-208ENST00000489892 ACSBG1Q96GR2 724 aa14.68□□□□□ -0.06
TRIM40-208ENST00000489892 USP16Q9Y5T5 823 aa14.68□□□□□ -0.06
TRIM40-208ENST00000489892 ATP10DQ9P241 1426 aa14.67□□□□□ -0.06
TRIM40-208ENST00000489892 GNAI3P08754 354 aa14.67□□□□□ -0.06
TRIM40-208ENST00000489892 NEXNQ0ZGT2 675 aa14.67□□□□□ -0.06
TRIM40-208ENST00000489892 SLC4A10Q6U841 1118 aa14.67□□□□□ -0.06
TRIM40-208ENST00000489892 ERICH6Q7L0X2 663 aa14.67□□□□□ -0.06
TRIM40-208ENST00000489892 G2E3Q7L622 706 aa14.67□□□□□ -0.06
TRIM40-208ENST00000489892 CASZ1Q86V15 1759 aa14.66□□□□□ -0.06
TRIM40-208ENST00000489892 LOC102724428A0A0B4J2F2 783 aa14.66□□□□□ -0.06
TRIM40-208ENST00000489892 PRAMEF22A3QJZ6 481 aa14.66□□□□□ -0.06
TRIM40-208ENST00000489892 SIK1P57059 783 aa14.66□□□□□ -0.06
TRIM40-208ENST00000489892 PDIA6Q15084 440 aa14.66□□□□□ -0.06
TRIM40-208ENST00000489892 CENPQQ7L2Z9 268 aaPredicted RBP14.66□□□□□ -0.06
TRIM40-208ENST00000489892 RWDD1Q9H446 243 aaPredicted RBP14.66□□□□□ -0.06
TRIM40-208ENST00000489892 ZBTB40Q9NUA8 1239 aa14.66□□□□□ -0.06
TRIM40-208ENST00000489892 ALDH1L1O75891 902 aa14.65□□□□□ -0.06
TRIM40-208ENST00000489892 MYL6BP14649 208 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms