RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 IGSF1Q8N6C5 1336 aa12.03□□□□□ -0.48
RAB3GAP1-205ENST00000489858 KCNA6P17658 529 aa12.02□□□□□ -0.49
RAB3GAP1-205ENST00000489858 CRB1P82279 1406 aa12.02□□□□□ -0.49
RAB3GAP1-205ENST00000489858 ADGRL3Q9HAR2 1447 aa12.02□□□□□ -0.49
RAB3GAP1-205ENST00000489858 LTN1O94822 1766 aa12.01□□□□□ -0.49
RAB3GAP1-205ENST00000489858 CHL1O00533 1208 aa12.01□□□□□ -0.49
RAB3GAP1-205ENST00000489858 NUCB1Q02818 461 aa12.01□□□□□ -0.49
RAB3GAP1-205ENST00000489858 DCTN1Q14203 1278 aa12.01□□□□□ -0.49
RAB3GAP1-205ENST00000489858 ANKLE2Q86XL3 938 aa12.01□□□□□ -0.49
RAB3GAP1-205ENST00000489858 GAS2L2Q8NHY3 880 aa12.01□□□□□ -0.49
RAB3GAP1-205ENST00000489858 GCC1Q96CN9 775 aa12.01□□□□□ -0.49
RAB3GAP1-205ENST00000489858 FAM208AQ9UK61 1670 aaKnown RBP12□□□□□ -0.49
RAB3GAP1-205ENST00000489858 ELL2O00472 640 aaPredicted RBP12□□□□□ -0.49
RAB3GAP1-205ENST00000489858 ZBTB7BO15156 539 aaPredicted RBP12□□□□□ -0.49
RAB3GAP1-205ENST00000489858 DEKP35659 375 aaKnown RBP12□□□□□ -0.49
RAB3GAP1-205ENST00000489858 RTF1Q92541 710 aaKnown RBP12□□□□□ -0.49
RAB3GAP1-205ENST00000489858 TBC1D32Q96NH3 1257 aa12□□□□□ -0.49
RAB3GAP1-205ENST00000489858 NWD1Q149M9 1564 aa12□□□□□ -0.49
RAB3GAP1-205ENST00000489858 MCM10Q7L590 875 aa11.99□□□□□ -0.49
RAB3GAP1-205ENST00000489858 ZNF454Q8N9F8 522 aa11.99□□□□□ -0.49
RAB3GAP1-205ENST00000489858 BCL2L12Q9HB09 334 aa11.99□□□□□ -0.49
RAB3GAP1-205ENST00000489858 PTPRCP08575 1304 aa11.99□□□□□ -0.49
RAB3GAP1-205ENST00000489858 PHRF1Q9P1Y6 1649 aaKnown RBP11.99□□□□□ -0.49
RAB3GAP1-205ENST00000489858 NFAT5O94916 1531 aa11.98□□□□□ -0.49
RAB3GAP1-205ENST00000489858 RGS12O14924 1447 aa11.98□□□□□ -0.49
RAB3GAP1-205ENST00000489858 HTATSF1O43719 755 aaKnown RBP11.98□□□□□ -0.49
RAB3GAP1-205ENST00000489858 SLC4A3P48751 1232 aa11.98□□□□□ -0.49
RAB3GAP1-205ENST00000489858 CHD1LQ86WJ1 897 aa11.98□□□□□ -0.49
RAB3GAP1-205ENST00000489858 SLC4A5Q9BY07 1137 aa11.98□□□□□ -0.49
RAB3GAP1-205ENST00000489858 ANO8Q9HCE9 1232 aaPredicted RBP11.98□□□□□ -0.49
RAB3GAP1-205ENST00000489858 VPS9D1Q9Y2B5 631 aa11.98□□□□□ -0.49
RAB3GAP1-205ENST00000489858 N4BP2Q86UW6 1770 aaPredicted RBP11.97□□□□□ -0.49
RAB3GAP1-205ENST00000489858 NPHP4O75161 1426 aaPredicted RBP11.97□□□□□ -0.49
RAB3GAP1-205ENST00000489858 GTPBP6O43824 516 aaPredicted RBP11.97□□□□□ -0.49
RAB3GAP1-205ENST00000489858 HOXC9P31274 260 aa11.97□□□□□ -0.49
RAB3GAP1-205ENST00000489858 FOSBP53539 338 aa11.97□□□□□ -0.49
RAB3GAP1-205ENST00000489858 INTS3Q68E01 1043 aaKnown RBP11.97□□□□□ -0.49
RAB3GAP1-205ENST00000489858 MAP3K5Q99683 1374 aa11.96□□□□□ -0.49
RAB3GAP1-205ENST00000489858 MTHFSDQ2M296 383 aaKnown RBP11.96□□□□□ -0.49
RAB3GAP1-205ENST00000489858 KCTD12Q96CX2 325 aaKnown RBP11.96□□□□□ -0.49
RAB3GAP1-205ENST00000489858 EYA1Q99502 592 aa11.96□□□□□ -0.49
RAB3GAP1-205ENST00000489858 LNPKQ9C0E8 428 aa11.96□□□□□ -0.49
RAB3GAP1-205ENST00000489858 C1orf115Q9H7X2 142 aa11.96□□□□□ -0.49
RAB3GAP1-205ENST00000489858 TSPYL4Q9UJ04 414 aa11.96□□□□□ -0.49
RAB3GAP1-205ENST00000489858 KIF1AQ12756 1690 aa11.96□□□□□ -0.5
RAB3GAP1-205ENST00000489858 SOS1Q07889 1333 aaPredicted RBP11.95□□□□□ -0.5
RAB3GAP1-205ENST00000489858 BMP2KLQ5H9B9 411 aa11.95□□□□□ -0.5
RAB3GAP1-205ENST00000489858 ABTB2Q8N961 1025 aa11.95□□□□□ -0.5
RAB3GAP1-205ENST00000489858 ATP10DQ9P241 1426 aa11.94□□□□□ -0.5
RAB3GAP1-205ENST00000489858 MSH6P52701 1360 aa11.94□□□□□ -0.5
RAB3GAP1-205ENST00000489858 EIF5BO60841 1220 aaKnown RBP11.94□□□□□ -0.5
RAB3GAP1-205ENST00000489858 MFAP1P55081 439 aaKnown RBP11.94□□□□□ -0.5
RAB3GAP1-205ENST00000489858 ANKRD45Q5TZF3 282 aa11.94□□□□□ -0.5
RAB3GAP1-205ENST00000489858 C22orf23Q9BZE7 217 aa11.94□□□□□ -0.5
RAB3GAP1-205ENST00000489858 SETD1BQ9UPS6 1966 aaKnown RBP11.94□□□□□ -0.5
RAB3GAP1-205ENST00000489858 SLIT3O75094 1523 aa11.93□□□□□ -0.5
RAB3GAP1-205ENST00000489858 GNAT3A8MTJ3 354 aa11.93□□□□□ -0.5
RAB3GAP1-205ENST00000489858 NFKBIBQ15653 356 aa11.93□□□□□ -0.5
RAB3GAP1-205ENST00000489858 KRT24Q2M2I5 525 aa11.93□□□□□ -0.5
RAB3GAP1-205ENST00000489858 C14orf37Q86TY3 774 aa11.93□□□□□ -0.5
RAB3GAP1-205ENST00000489858 ANKRD44Q8N8A2 993 aa11.93□□□□□ -0.5
RAB3GAP1-205ENST00000489858 BABAM1Q9NWV8 329 aa11.93□□□□□ -0.5
RAB3GAP1-205ENST00000489858 LMO7Q8WWI1 1683 aa11.93□□□□□ -0.5
RAB3GAP1-205ENST00000489858 MED1Q15648 1581 aaPredicted RBP11.92□□□□□ -0.5
RAB3GAP1-205ENST00000489858 PXDNLA1KZ92 1463 aa11.92□□□□□ -0.5
RAB3GAP1-205ENST00000489858 FOXO3O43524 673 aa11.92□□□□□ -0.5
RAB3GAP1-205ENST00000489858 NUTM2GQ5VZR2 741 aa11.92□□□□□ -0.5
RAB3GAP1-205ENST00000489858 RPAP2Q8IXW5 612 aaPredicted RBP11.92□□□□□ -0.5
RAB3GAP1-205ENST00000489858 STK31Q9BXU1 1019 aa11.92□□□□□ -0.5
RAB3GAP1-205ENST00000489858 CACNA1FO60840 1977 aa11.91□□□□□ -0.5
RAB3GAP1-205ENST00000489858 EVI5O60447 810 aa11.91□□□□□ -0.5
RAB3GAP1-205ENST00000489858 PTPREP23469 700 aa11.91□□□□□ -0.5
RAB3GAP1-205ENST00000489858 CCT4P50991 539 aaKnown RBP11.91□□□□□ -0.5
RAB3GAP1-205ENST00000489858 SIRT2Q8IXJ6 389 aa11.91□□□□□ -0.5
RAB3GAP1-205ENST00000489858 KCNH5Q8NCM2 988 aa11.91□□□□□ -0.5
RAB3GAP1-205ENST00000489858 DDX27Q96GQ7 796 aaKnown RBP11.91□□□□□ -0.5
RAB3GAP1-205ENST00000489858 LARP6Q9BRS8 491 aaKnown RBP11.91□□□□□ -0.5
RAB3GAP1-205ENST00000489858 TRPM3Q9HCF6 1732 aaPredicted RBP11.91□□□□□ -0.5
RAB3GAP1-205ENST00000489858 CAMTA1Q9Y6Y1 1673 aa11.91□□□□□ -0.5
RAB3GAP1-205ENST00000489858 KDM3BQ7LBC6 1761 aa11.9□□□□□ -0.5
RAB3GAP1-205ENST00000489858 MFSD10Q14728 455 aa11.9□□□□□ -0.5
RAB3GAP1-205ENST00000489858 IP6K1Q92551 441 aa11.9□□□□□ -0.5
RAB3GAP1-205ENST00000489858 DCTPP1Q9H773 170 aa11.9□□□□□ -0.5
RAB3GAP1-205ENST00000489858 NCAPD2Q15021 1401 aa11.89□□□□□ -0.51
RAB3GAP1-205ENST00000489858 BHMG1C9JSJ3 638 aaPredicted RBP11.89□□□□□ -0.51
RAB3GAP1-205ENST00000489858 HMMRO75330 724 aa11.89□□□□□ -0.51
RAB3GAP1-205ENST00000489858 CDC45O75419 566 aa11.89□□□□□ -0.51
RAB3GAP1-205ENST00000489858 PSME1Q06323 249 aa11.89□□□□□ -0.51
RAB3GAP1-205ENST00000489858 CCDC30Q5VVM6 783 aa11.89□□□□□ -0.51
RAB3GAP1-205ENST00000489858 CEP85Q6P2H3 762 aa11.89□□□□□ -0.51
RAB3GAP1-205ENST00000489858 LTV1Q96GA3 475 aaPredicted RBP11.89□□□□□ -0.51
RAB3GAP1-205ENST00000489858 TBC1D2Q9BYX2 928 aa11.89□□□□□ -0.51
RAB3GAP1-205ENST00000489858 OVOS2A0A0G2JMS6 1433 aa11.88□□□□□ -0.51
RAB3GAP1-205ENST00000489858 ESCO1Q5FWF5 840 aa11.88□□□□□ -0.51
RAB3GAP1-205ENST00000489858 HSCBQ8IWL3 235 aa11.88□□□□□ -0.51
RAB3GAP1-205ENST00000489858 ZDHHC16Q969W1 377 aa11.88□□□□□ -0.51
RAB3GAP1-205ENST00000489858 ZBED2Q9BTP6 218 aa11.88□□□□□ -0.51
RAB3GAP1-205ENST00000489858 RBM25P49756 843 aaKnown RBP11.87□□□□□ -0.51
RAB3GAP1-205ENST00000489858 TAF7Q15545 349 aaPredicted RBP11.87□□□□□ -0.51
RAB3GAP1-205ENST00000489858 MEIS3Q99687 375 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms