RNA–Protein interactions for RNA: ENST00000489551.5

CSF3R-213, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 1 (best)

Gene CSF3R, Length 787 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-213ENST00000489551 USPL1Q5W0Q7 1092 aa13.72□□□□□ -0.21
CSF3R-213ENST00000489551 BCL2L12Q9HB09 334 aa13.72□□□□□ -0.21
CSF3R-213ENST00000489551 NMRK2Q9NPI5 230 aa13.72□□□□□ -0.21
CSF3R-213ENST00000489551 ANKRD31Q8N7Z5 1873 aa13.72□□□□□ -0.21
CSF3R-213ENST00000489551 C9orf131Q5VYM1 1079 aa13.7□□□□□ -0.22
CSF3R-213ENST00000489551 PIM2Q9P1W9 311 aa13.7□□□□□ -0.22
CSF3R-213ENST00000489551 ZBTB1Q9Y2K1 713 aa13.7□□□□□ -0.22
CSF3R-213ENST00000489551 WDR90Q96KV7 1748 aa13.7□□□□□ -0.22
CSF3R-213ENST00000489551 NFIXQ14938 502 aa13.69□□□□□ -0.22
CSF3R-213ENST00000489551 CC2D1BQ5T0F9 858 aaKnown RBP13.69□□□□□ -0.22
CSF3R-213ENST00000489551 IFFO2Q5TF58 517 aa13.69□□□□□ -0.22
CSF3R-213ENST00000489551 PCNTO95613 3336 aa13.69□□□□□ -0.22
CSF3R-213ENST00000489551 COL15A1P39059 1388 aa13.69□□□□□ -0.22
CSF3R-213ENST00000489551 TOMM70O94826 608 aa13.68□□□□□ -0.22
CSF3R-213ENST00000489551 PRELPP51888 382 aa13.68□□□□□ -0.22
CSF3R-213ENST00000489551 DALRD3Q5D0E6 543 aaKnown RBP13.68□□□□□ -0.22
CSF3R-213ENST00000489551 DNAJC5GQ8N7S2 189 aa13.68□□□□□ -0.22
CSF3R-213ENST00000489551 NARFQ9UHQ1 456 aa13.68□□□□□ -0.22
CSF3R-213ENST00000489551 TNRC6CQ9HCJ0 1690 aaKnown RBP13.67□□□□□ -0.22
CSF3R-213ENST00000489551 DIAPH1O60610 1272 aaKnown RBP13.67□□□□□ -0.22
CSF3R-213ENST00000489551 CACNA1SQ13698 1873 aa13.67□□□□□ -0.22
CSF3R-213ENST00000489551 CARMIL3Q8ND23 1372 aa13.67□□□□□ -0.22
CSF3R-213ENST00000489551 COL11A2P13942 1736 aaPredicted RBP13.67□□□□□ -0.22
CSF3R-213ENST00000489551 SCN7AQ01118 1682 aa13.66□□□□□ -0.22
CSF3R-213ENST00000489551 ZPR1O75312 459 aa13.66□□□□□ -0.22
CSF3R-213ENST00000489551 IL17REQ8NFR9 667 aa13.66□□□□□ -0.22
CSF3R-213ENST00000489551 TIAM2Q8IVF5 1701 aa13.66□□□□□ -0.22
CSF3R-213ENST00000489551 DICER1Q9UPY3 1922 aaKnown RBP13.66□□□□□ -0.22
CSF3R-213ENST00000489551 RASSF7Q02833 373 aa13.65□□□□□ -0.22
CSF3R-213ENST00000489551 VSIG10Q8N0Z9 540 aa13.65□□□□□ -0.22
CSF3R-213ENST00000489551 RNF181Q9P0P0 153 aa13.65□□□□□ -0.22
CSF3R-213ENST00000489551 FER1L6Q2WGJ9 1857 aa13.65□□□□□ -0.22
CSF3R-213ENST00000489551 SERPINB2P05120 415 aa13.64□□□□□ -0.23
CSF3R-213ENST00000489551 CANXP27824 592 aaKnown RBP13.64□□□□□ -0.23
CSF3R-213ENST00000489551 EIF5P55010 431 aaKnown RBP13.64□□□□□ -0.23
CSF3R-213ENST00000489551 ZNF496Q96IT1 587 aaPredicted RBP13.64□□□□□ -0.23
CSF3R-213ENST00000489551 BCORQ6W2J9 1755 aa13.63□□□□□ -0.23
CSF3R-213ENST00000489551 NPC1L1Q9UHC9 1359 aa13.63□□□□□ -0.23
CSF3R-213ENST00000489551 APLP1P51693 650 aa13.63□□□□□ -0.23
CSF3R-213ENST00000489551 HTRA3P83110 453 aa13.63□□□□□ -0.23
CSF3R-213ENST00000489551 CNGB1Q14028 1251 aaPredicted RBP13.63□□□□□ -0.23
CSF3R-213ENST00000489551 RRAGCQ9HB90 399 aa13.63□□□□□ -0.23
CSF3R-213ENST00000489551 SLX4Q8IY92 1834 aa13.62□□□□□ -0.23
CSF3R-213ENST00000489551 KCNQ3O43525 872 aa13.62□□□□□ -0.23
CSF3R-213ENST00000489551 RBM46Q8TBY0 533 aaKnown RBP13.62□□□□□ -0.23
CSF3R-213ENST00000489551 PHACTR3Q96KR7 559 aa13.62□□□□□ -0.23
CSF3R-213ENST00000489551 HEG1Q9ULI3 1381 aa13.61□□□□□ -0.23
CSF3R-213ENST00000489551 TBC1D9BQ66K14 1250 aa13.61□□□□□ -0.23
CSF3R-213ENST00000489551 ZNF790Q6PG37 636 aa13.61□□□□□ -0.23
CSF3R-213ENST00000489551 CEMIPQ8WUJ3 1361 aa13.6□□□□□ -0.23
CSF3R-213ENST00000489551 GNAT3A8MTJ3 354 aa13.6□□□□□ -0.23
CSF3R-213ENST00000489551 NFKBIEO00221 500 aa13.6□□□□□ -0.23
CSF3R-213ENST00000489551 U2SURPO15042 1029 aaKnown RBP13.6□□□□□ -0.23
CSF3R-213ENST00000489551 BICDL1Q6ZP65 573 aa13.6□□□□□ -0.23
CSF3R-213ENST00000489551 CCDC24Q8N4L8 307 aa13.6□□□□□ -0.23
CSF3R-213ENST00000489551 DLG5Q8TDM6 1919 aa13.6□□□□□ -0.23
CSF3R-213ENST00000489551 ARFGEF2Q9Y6D5 1785 aa13.6□□□□□ -0.23
CSF3R-213ENST00000489551 A1BGP04217 495 aa13.59□□□□□ -0.23
CSF3R-213ENST00000489551 C2CD5Q86YS7 1000 aa13.59□□□□□ -0.23
CSF3R-213ENST00000489551 TTC5Q8N0Z6 440 aa13.59□□□□□ -0.23
CSF3R-213ENST00000489551 TBC1D2BQ9UPU7 963 aa13.59□□□□□ -0.23
CSF3R-213ENST00000489551 PRAMEF22A3QJZ6 481 aa13.58□□□□□ -0.24
CSF3R-213ENST00000489551 STARD3NLO95772 234 aa13.58□□□□□ -0.24
CSF3R-213ENST00000489551 TTLL6Q8N841 843 aa13.58□□□□□ -0.24
CSF3R-213ENST00000489551 GAS2L2Q8NHY3 880 aa13.58□□□□□ -0.24
CSF3R-213ENST00000489551 RSPH6AQ9H0K4 717 aa13.58□□□□□ -0.24
CSF3R-213ENST00000489551 KDM2BQ8NHM5 1336 aa13.58□□□□□ -0.24
CSF3R-213ENST00000489551 POTECB2RU33 542 aa13.57□□□□□ -0.24
CSF3R-213ENST00000489551 CAMTA2O94983 1202 aa13.57□□□□□ -0.24
CSF3R-213ENST00000489551 LMNB1P20700 586 aa13.57□□□□□ -0.24
CSF3R-213ENST00000489551 TEFQ10587 303 aa13.57□□□□□ -0.24
CSF3R-213ENST00000489551 PRR5LQ6MZQ0 368 aa13.57□□□□□ -0.24
CSF3R-213ENST00000489551 USP16Q9Y5T5 823 aa13.57□□□□□ -0.24
CSF3R-213ENST00000489551 H0YIN7 160 aa13.56□□□□□ -0.24
CSF3R-213ENST00000489551 PRKAR2BP31323 418 aa13.56□□□□□ -0.24
CSF3R-213ENST00000489551 IL6STP40189 918 aaPredicted RBP13.56□□□□□ -0.24
CSF3R-213ENST00000489551 PIP4K2AP48426 406 aaPredicted RBP13.56□□□□□ -0.24
CSF3R-213ENST00000489551 FSTL1Q12841 308 aa13.56□□□□□ -0.24
CSF3R-213ENST00000489551 A0A087WZG4 1122 aa13.55□□□□□ -0.24
CSF3R-213ENST00000489551 GLTPD2A6NH11 291 aa13.55□□□□□ -0.24
CSF3R-213ENST00000489551 KLRG1Q96E93 195 aa13.55□□□□□ -0.24
CSF3R-213ENST00000489551 ZNF330Q9Y3S2 320 aaPredicted RBP13.55□□□□□ -0.24
CSF3R-213ENST00000489551 C16orf71Q8IYS4 520 aaPredicted RBP13.54□□□□□ -0.24
CSF3R-213ENST00000489551 FMNL2Q96PY5 1086 aa13.54□□□□□ -0.24
CSF3R-213ENST00000489551 BRIP1Q9BX63 1249 aa13.54□□□□□ -0.24
CSF3R-213ENST00000489551 TEX13AQ9BXU3 409 aaPredicted RBP13.54□□□□□ -0.24
CSF3R-213ENST00000489551 ZNF219Q9P2Y4 722 aaPredicted RBP13.54□□□□□ -0.24
CSF3R-213ENST00000489551 ZC3H4Q9UPT8 1303 aaKnown RBP13.54□□□□□ -0.24
CSF3R-213ENST00000489551 BTBD11A6QL63 1104 aa13.53□□□□□ -0.24
CSF3R-213ENST00000489551 C21orf2O43822 256 aa13.53□□□□□ -0.24
CSF3R-213ENST00000489551 MCM10Q7L590 875 aa13.53□□□□□ -0.24
CSF3R-213ENST00000489551 JMYQ8N9B5 988 aa13.53□□□□□ -0.24
CSF3R-213ENST00000489551 ZNF622Q969S3 477 aaKnown RBP eCLIP13.53□□□□□ -0.24
CSF3R-213ENST00000489551 NUP98P52948 1817 aa13.53□□□□□ -0.24
CSF3R-213ENST00000489551 PPP2R1AP30153 589 aa13.52□□□□□ -0.25
CSF3R-213ENST00000489551 DCTN1Q14203 1278 aa13.52□□□□□ -0.25
CSF3R-213ENST00000489551 LAMB4A4D0S4 1761 aa13.52□□□□□ -0.25
CSF3R-213ENST00000489551 KDM3BQ7LBC6 1761 aa13.52□□□□□ -0.25
CSF3R-213ENST00000489551 NBPF26B4DH59 902 aa13.51□□□□□ -0.25
CSF3R-213ENST00000489551 VEGFAP15692 232 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms